RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.06
ATP6V0A1-220ENST00000588901 KDM5DQ9BY66 1539 aa27.89■■■□□ 2.06
ATP6V0A1-220ENST00000588901 DUOX2Q9NRD8 1548 aa27.88■■■□□ 2.05
ATP6V0A1-220ENST00000588901 PTPRKQ15262 1439 aa27.86■■■□□ 2.05
ATP6V0A1-220ENST00000588901 KIF15Q9NS87 1388 aa27.85■■■□□ 2.05
ATP6V0A1-220ENST00000588901 MROH1Q8NDA8 1641 aa27.82■■■□□ 2.04
ATP6V0A1-220ENST00000588901 ERBINQ96RT1 1412 aa27.81■■■□□ 2.04
ATP6V0A1-220ENST00000588901 MYO3AQ8NEV4 1616 aa27.79■■■□□ 2.04
ATP6V0A1-220ENST00000588901 PZPP20742 1482 aa27.78■■■□□ 2.04
ATP6V0A1-220ENST00000588901 WASHC2CQ9Y4E1 1318 aa27.78■■■□□ 2.04
ATP6V0A1-220ENST00000588901 ZC3H13Q5T200 1668 aaKnown RBP27.78■■■□□ 2.04
ATP6V0A1-220ENST00000588901 ABCC3O15438 1527 aa27.77■■■□□ 2.04
ATP6V0A1-220ENST00000588901 ADGRL2O95490 1459 aa27.77■■■□□ 2.04
ATP6V0A1-220ENST00000588901 ANKRD30AQ9BXX3 1397 aa27.76■■■□□ 2.03
ATP6V0A1-220ENST00000588901 ZNF142P52746 1687 aaPredicted RBP27.76■■■□□ 2.03
ATP6V0A1-220ENST00000588901 FAM50AQ14320 339 aaKnown RBP27.76■■■□□ 2.03
ATP6V0A1-220ENST00000588901 RRP7BPQ9NSQ0 103 aa27.76■■■□□ 2.03
ATP6V0A1-220ENST00000588901 NCOA1Q15788 1441 aa27.75■■■□□ 2.03
ATP6V0A1-220ENST00000588901 PRDM15P57071 1507 aaPredicted RBP27.74■■■□□ 2.03
ATP6V0A1-220ENST00000588901 STRCQ7RTU9 1775 aa27.73■■■□□ 2.03
ATP6V0A1-220ENST00000588901 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
ATP6V0A1-220ENST00000588901 CEP170BQ9Y4F5 1589 aaPredicted RBP27.72■■■□□ 2.03
ATP6V0A1-220ENST00000588901 DEPDC5O75140 1603 aa27.71■■■□□ 2.03
ATP6V0A1-220ENST00000588901 FBXO31Q5XUX0 539 aaPredicted RBP27.68■■■□□ 2.02
ATP6V0A1-220ENST00000588901 PPARGC1BQ86YN6 1023 aaKnown RBP27.68■■■□□ 2.02
ATP6V0A1-220ENST00000588901 TNRQ92752 1358 aa27.67■■■□□ 2.02
ATP6V0A1-220ENST00000588901 CEP152O94986 1710 aa27.67■■■□□ 2.02
ATP6V0A1-220ENST00000588901 CAMSAP1Q5T5Y3 1602 aa27.66■■■□□ 2.02
ATP6V0A1-220ENST00000588901 A2ML1A8K2U0 1454 aa27.65■■■□□ 2.02
ATP6V0A1-220ENST00000588901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.64■■■□□ 2.02
ATP6V0A1-220ENST00000588901 SPATA31D1Q6ZQQ2 1576 aa27.62■■■□□ 2.01
ATP6V0A1-220ENST00000588901 PLA2R1Q13018 1463 aa27.62■■■□□ 2.01
ATP6V0A1-220ENST00000588901 DMRT2Q9Y5R5 561 aa27.61■■■□□ 2.01
ATP6V0A1-220ENST00000588901 VWDEQ8N2E2 1590 aa27.6■■■□□ 2.01
ATP6V0A1-220ENST00000588901 PTPRTO14522 1441 aa27.6■■■□□ 2.01
ATP6V0A1-220ENST00000588901 ERVK-7P63135 1459 aa27.6■■■□□ 2.01
ATP6V0A1-220ENST00000588901 NLRP1Q9C000 1473 aa27.59■■■□□ 2.01
ATP6V0A1-220ENST00000588901 ARHGAP31Q2M1Z3 1444 aa27.58■■■□□ 2.01
ATP6V0A1-220ENST00000588901 ROCK1Q13464 1354 aa27.58■■■□□ 2.01
ATP6V0A1-220ENST00000588901 ANKRD50Q9ULJ7 1429 aa27.58■■■□□ 2
ATP6V0A1-220ENST00000588901 LMTK2Q8IWU2 1503 aa27.57■■■□□ 2
ATP6V0A1-220ENST00000588901 KANK1Q14678 1352 aa27.57■■■□□ 2
ATP6V0A1-220ENST00000588901 RRBP1Q9P2E9 1410 aaKnown RBP27.55■■■□□ 2
ATP6V0A1-220ENST00000588901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.54■■■□□ 26e-7■■■□□ 16.6
ATP6V0A1-220ENST00000588901 ILDR1Q86SU0 546 aaPredicted RBP27.51■■□□□ 1.99
ATP6V0A1-220ENST00000588901 NCKAP5LQ9HCH0 1330 aa27.49■■□□□ 1.99
ATP6V0A1-220ENST00000588901 UGGT1Q9NYU2 1555 aa27.49■■□□□ 1.99
ATP6V0A1-220ENST00000588901 PKD2Q13563 968 aa27.49■■□□□ 1.99
ATP6V0A1-220ENST00000588901 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
ATP6V0A1-220ENST00000588901 UNC13BO14795 1591 aa27.48■■□□□ 1.99
ATP6V0A1-220ENST00000588901 ITGAEP38570 1179 aa27.45■■□□□ 1.98
ATP6V0A1-220ENST00000588901 POLR1AO95602 1720 aaPredicted RBP27.43■■□□□ 1.98
ATP6V0A1-220ENST00000588901 NEURL4Q96JN8 1562 aa27.43■■□□□ 1.98
ATP6V0A1-220ENST00000588901 THEMISQ8N1K5 641 aaPredicted RBP27.41■■□□□ 1.98
ATP6V0A1-220ENST00000588901 CERKQ8TCT0 537 aa27.4■■□□□ 1.98
ATP6V0A1-220ENST00000588901 FBXO41Q8TF61 875 aa27.4■■□□□ 1.98
ATP6V0A1-220ENST00000588901 CFAP65Q6ZU64 1925 aaKnown RBP27.39■■□□□ 1.98
ATP6V0A1-220ENST00000588901 TET3O43151 1660 aa27.39■■□□□ 1.97
ATP6V0A1-220ENST00000588901 UBR1Q8IWV7 1749 aa27.38■■□□□ 1.97
ATP6V0A1-220ENST00000588901 LTBP4Q8N2S1 1624 aa27.38■■□□□ 1.97
ATP6V0A1-220ENST00000588901 NOS1P29475 1434 aa27.38■■□□□ 1.97
ATP6V0A1-220ENST00000588901 SYNMO15061 1565 aa27.38■■□□□ 1.97
ATP6V0A1-220ENST00000588901 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
ATP6V0A1-220ENST00000588901 IQGAP3Q86VI3 1631 aa27.34■■□□□ 1.97
ATP6V0A1-220ENST00000588901 PIK3C2BO00750 1634 aa27.34■■□□□ 1.97
ATP6V0A1-220ENST00000588901 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
ATP6V0A1-220ENST00000588901 MED14O60244 1454 aa27.33■■□□□ 1.97
ATP6V0A1-220ENST00000588901 ANKLE2Q86XL3 938 aa27.33■■□□□ 1.97
ATP6V0A1-220ENST00000588901 SLIT1O75093 1534 aa27.31■■□□□ 1.96
ATP6V0A1-220ENST00000588901 KDM5AP29375 1690 aaKnown RBP27.3■■□□□ 1.96
ATP6V0A1-220ENST00000588901 ARHGAP23Q9P227 1491 aa27.3■■□□□ 1.96
ATP6V0A1-220ENST00000588901 ZNF335Q9H4Z2 1342 aaPredicted RBP27.29■■□□□ 1.96
ATP6V0A1-220ENST00000588901 NPHP4O75161 1426 aaPredicted RBP27.29■■□□□ 1.96
ATP6V0A1-220ENST00000588901 NAIPQ13075 1403 aa27.28■■□□□ 1.96
ATP6V0A1-220ENST00000588901 NUP155O75694 1391 aa27.26■■□□□ 1.95
ATP6V0A1-220ENST00000588901 IDI1Q13907 227 aa27.26■■□□□ 1.95
ATP6V0A1-220ENST00000588901 E9PCH4 1651 aa27.26■■□□□ 1.95
ATP6V0A1-220ENST00000588901 IQGAP1P46940 1657 aa27.25■■□□□ 1.95
ATP6V0A1-220ENST00000588901 ADGRB3O60242 1522 aa27.25■■□□□ 1.95
ATP6V0A1-220ENST00000588901 IQSEC2Q5JU85 1478 aa27.25■■□□□ 1.95
ATP6V0A1-220ENST00000588901 SCAF11Q99590 1463 aaKnown RBP27.25■■□□□ 1.95
ATP6V0A1-220ENST00000588901 HFM1A2PYH4 1435 aa27.23■■□□□ 1.95
ATP6V0A1-220ENST00000588901 SLC52A1Q9NWF4 448 aa27.22■■□□□ 1.95
ATP6V0A1-220ENST00000588901 TMEM2Q9UHN6 1383 aa27.22■■□□□ 1.95
ATP6V0A1-220ENST00000588901 LTKP29376 864 aa27.18■■□□□ 1.94
ATP6V0A1-220ENST00000588901 STAG3Q9UJ98 1225 aa27.18■■□□□ 1.94
ATP6V0A1-220ENST00000588901 TXNDC2Q86VQ3 553 aa27.15■■□□□ 1.94
ATP6V0A1-220ENST00000588901 CPS1P31327 1500 aa27.15■■□□□ 1.94
ATP6V0A1-220ENST00000588901 EID1Q9Y6B2 187 aa27.13■■□□□ 1.93
ATP6V0A1-220ENST00000588901 TMEM131LA2VDJ0 1609 aa27.12■■□□□ 1.93
ATP6V0A1-220ENST00000588901 ZFYVE9O95405 1425 aa27.08■■□□□ 1.93
ATP6V0A1-220ENST00000588901 SPHKAPQ2M3C7 1700 aa27.07■■□□□ 1.92
ATP6V0A1-220ENST00000588901 MYO5BQ9ULV0 1848 aa27.06■■□□□ 1.92
ATP6V0A1-220ENST00000588901 STRCP1A6NGW2 1772 aa27.04■■□□□ 1.92
ATP6V0A1-220ENST00000588901 RIMS2Q9UQ26 1411 aa27.02■■□□□ 1.92
ATP6V0A1-220ENST00000588901 TRPM2O94759 1503 aa27■■□□□ 1.91
ATP6V0A1-220ENST00000588901 TRIM52Q96A61 297 aa26.98■■□□□ 1.91
ATP6V0A1-220ENST00000588901 PLEKHG1Q9ULL1 1385 aa26.97■■□□□ 1.91
ATP6V0A1-220ENST00000588901 LRRC7Q96NW7 1537 aa26.97■■□□□ 1.91
ATP6V0A1-220ENST00000588901 CHGAP10645 457 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms