RNA–Protein interactions for RNA: ENST00000588841.1

C19orf53-203, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 2

Gene C19orf53, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-203ENST00000588841 RNF17Q9BXT8 1623 aaKnown RBP12.68□□□□□ -0.38
C19orf53-203ENST00000588841 PTPRMP28827 1452 aa12.67□□□□□ -0.38
C19orf53-203ENST00000588841 HFM1A2PYH4 1435 aa12.67□□□□□ -0.38
C19orf53-203ENST00000588841 RIMS1Q86UR5 1692 aaKnown RBP12.65□□□□□ -0.38
C19orf53-203ENST00000588841 FER1L4A9Z1Z3 1794 aa12.65□□□□□ -0.38
C19orf53-203ENST00000588841 DEPDC5O75140 1603 aa12.65□□□□□ -0.38
C19orf53-203ENST00000588841 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
C19orf53-203ENST00000588841 KDM5DQ9BY66 1539 aa12.64□□□□□ -0.39
C19orf53-203ENST00000588841 CEBPAP49715 358 aaPredicted RBP12.64□□□□□ -0.39
C19orf53-203ENST00000588841 ZMYM3Q14202 1370 aa12.64□□□□□ -0.39
C19orf53-203ENST00000588841 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
C19orf53-203ENST00000588841 CNTLNQ9NXG0 1405 aa12.63□□□□□ -0.39
C19orf53-203ENST00000588841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.391e-8■■■□□ 14.7
C19orf53-203ENST00000588841 WASHC2CQ9Y4E1 1318 aa12.62□□□□□ -0.39
C19orf53-203ENST00000588841 ABCC3O15438 1527 aa12.62□□□□□ -0.39
C19orf53-203ENST00000588841 CLTCQ00610 1675 aaKnown RBP12.62□□□□□ -0.39
C19orf53-203ENST00000588841 GCC2Q8IWJ2 1684 aa12.62□□□□□ -0.39
C19orf53-203ENST00000588841 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
C19orf53-203ENST00000588841 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
C19orf53-203ENST00000588841 UNC13BO14795 1591 aa12.6□□□□□ -0.39
C19orf53-203ENST00000588841 LMTK2Q8IWU2 1503 aa12.6□□□□□ -0.39
C19orf53-203ENST00000588841 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
C19orf53-203ENST00000588841 C3P01024 1663 aa12.59□□□□□ -0.39
C19orf53-203ENST00000588841 SETD5Q9C0A6 1442 aa12.59□□□□□ -0.39
C19orf53-203ENST00000588841 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.4
C19orf53-203ENST00000588841 FBXO31Q5XUX0 539 aaPredicted RBP12.58□□□□□ -0.4
C19orf53-203ENST00000588841 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
C19orf53-203ENST00000588841 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
C19orf53-203ENST00000588841 NUP155O75694 1391 aa12.57□□□□□ -0.4
C19orf53-203ENST00000588841 KANK1Q14678 1352 aa12.57□□□□□ -0.4
C19orf53-203ENST00000588841 CEP152O94986 1710 aa12.57□□□□□ -0.4
C19orf53-203ENST00000588841 ARHGAP31Q2M1Z3 1444 aa12.57□□□□□ -0.4
C19orf53-203ENST00000588841 PZPP20742 1482 aa12.57□□□□□ -0.4
C19orf53-203ENST00000588841 NPATQ14207 1427 aa12.56□□□□□ -0.4
C19orf53-203ENST00000588841 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
C19orf53-203ENST00000588841 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
C19orf53-203ENST00000588841 IQGAP3Q86VI3 1631 aa12.55□□□□□ -0.4
C19orf53-203ENST00000588841 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
C19orf53-203ENST00000588841 HRCP23327 699 aa12.52□□□□□ -0.41
C19orf53-203ENST00000588841 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
C19orf53-203ENST00000588841 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
C19orf53-203ENST00000588841 ERVK-7P63135 1459 aa12.52□□□□□ -0.41
C19orf53-203ENST00000588841 SPATA31D1Q6ZQQ2 1576 aa12.52□□□□□ -0.41
C19orf53-203ENST00000588841 TET3O43151 1660 aa12.51□□□□□ -0.41
C19orf53-203ENST00000588841 NOS1P29475 1434 aa12.51□□□□□ -0.41
C19orf53-203ENST00000588841 RPRD2Q5VT52 1461 aaKnown RBP12.5□□□□□ -0.41
C19orf53-203ENST00000588841 LMTK3Q96Q04 1460 aa12.5□□□□□ -0.41
C19orf53-203ENST00000588841 E9PCH4 1651 aa12.49□□□□□ -0.41
C19orf53-203ENST00000588841 TNRQ92752 1358 aa12.49□□□□□ -0.41
C19orf53-203ENST00000588841 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
C19orf53-203ENST00000588841 MPHOSPH9Q99550 1183 aa12.48□□□□□ -0.41
C19orf53-203ENST00000588841 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
C19orf53-203ENST00000588841 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
C19orf53-203ENST00000588841 PKD2Q13563 968 aa12.47□□□□□ -0.41
C19orf53-203ENST00000588841 SYNMO15061 1565 aa12.47□□□□□ -0.41
C19orf53-203ENST00000588841 PTPRTO14522 1441 aa12.46□□□□□ -0.41
C19orf53-203ENST00000588841 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
C19orf53-203ENST00000588841 MYO3AQ8NEV4 1616 aa12.46□□□□□ -0.41
C19orf53-203ENST00000588841 PLA2R1Q13018 1463 aa12.46□□□□□ -0.42
C19orf53-203ENST00000588841 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
C19orf53-203ENST00000588841 IDI1Q13907 227 aa12.45□□□□□ -0.42
C19orf53-203ENST00000588841 FOXD1Q16676 465 aa12.45□□□□□ -0.42
C19orf53-203ENST00000588841 NLRP1Q9C000 1473 aa12.45□□□□□ -0.42
C19orf53-203ENST00000588841 HSPA2P54652 639 aa12.44□□□□□ -0.42
C19orf53-203ENST00000588841 A2ML1A8K2U0 1454 aa12.44□□□□□ -0.42
C19orf53-203ENST00000588841 CEP170BQ9Y4F5 1589 aaPredicted RBP12.43□□□□□ -0.42
C19orf53-203ENST00000588841 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
C19orf53-203ENST00000588841 CFAP65Q6ZU64 1925 aaKnown RBP12.43□□□□□ -0.42
C19orf53-203ENST00000588841 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
C19orf53-203ENST00000588841 PCGF6Q9BYE7 350 aa12.42□□□□□ -0.42
C19orf53-203ENST00000588841 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
C19orf53-203ENST00000588841 PIK3C2BO00750 1634 aa12.41□□□□□ -0.42
C19orf53-203ENST00000588841 TRPM2O94759 1503 aa12.39□□□□□ -0.43
C19orf53-203ENST00000588841 SPHKAPQ2M3C7 1700 aa12.39□□□□□ -0.43
C19orf53-203ENST00000588841 UBR1Q8IWV7 1749 aa12.38□□□□□ -0.43
C19orf53-203ENST00000588841 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
C19orf53-203ENST00000588841 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
C19orf53-203ENST00000588841 ANKRD30BQ9BXX2 1392 aa12.37□□□□□ -0.43
C19orf53-203ENST00000588841 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
C19orf53-203ENST00000588841 TMEM131LA2VDJ0 1609 aa12.36□□□□□ -0.43
C19orf53-203ENST00000588841 ADGRB3O60242 1522 aa12.36□□□□□ -0.43
C19orf53-203ENST00000588841 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
C19orf53-203ENST00000588841 DHX57Q6P158 1386 aaKnown RBP12.35□□□□□ -0.43
C19orf53-203ENST00000588841 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
C19orf53-203ENST00000588841 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
C19orf53-203ENST00000588841 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
C19orf53-203ENST00000588841 SLIT1O75093 1534 aa12.34□□□□□ -0.43
C19orf53-203ENST00000588841 LTKP29376 864 aa12.34□□□□□ -0.43
C19orf53-203ENST00000588841 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
C19orf53-203ENST00000588841 CCDC144AA2RUR9 1427 aa12.32□□□□□ -0.44
C19orf53-203ENST00000588841 ZFYVE9O95405 1425 aa12.32□□□□□ -0.44
C19orf53-203ENST00000588841 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
C19orf53-203ENST00000588841 SPATA31E1Q6ZUB1 1445 aa12.31□□□□□ -0.44
C19orf53-203ENST00000588841 ANKLE2Q86XL3 938 aa12.31□□□□□ -0.44
C19orf53-203ENST00000588841 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
C19orf53-203ENST00000588841 TXNDC2Q86VQ3 553 aa12.3□□□□□ -0.44
C19orf53-203ENST00000588841 FBXO41Q8TF61 875 aa12.3□□□□□ -0.44
C19orf53-203ENST00000588841 MYO5BQ9ULV0 1848 aa12.3□□□□□ -0.44
C19orf53-203ENST00000588841 RIMS2Q9UQ26 1411 aa12.29□□□□□ -0.44
C19orf53-203ENST00000588841 MED14O60244 1454 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms