RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 NCOA1Q15788 1441 aa28.76■■■□□ 2.19
ERCC1-207ENST00000588738 ZMYM3Q14202 1370 aa28.75■■■□□ 2.19
ERCC1-207ENST00000588738 ADGRL2O95490 1459 aa28.75■■■□□ 2.19
ERCC1-207ENST00000588738 ERBINQ96RT1 1412 aa28.74■■■□□ 2.19
ERCC1-207ENST00000588738 SETD1BQ9UPS6 1966 aaKnown RBP28.73■■■□□ 2.19
ERCC1-207ENST00000588738 RNF17Q9BXT8 1623 aaKnown RBP28.73■■■□□ 2.19
ERCC1-207ENST00000588738 FAM135AQ9P2D6 1515 aa28.73■■■□□ 2.19
ERCC1-207ENST00000588738 WASHC2CQ9Y4E1 1318 aa28.71■■■□□ 2.19
ERCC1-207ENST00000588738 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
ERCC1-207ENST00000588738 KDM5DQ9BY66 1539 aa28.69■■■□□ 2.18
ERCC1-207ENST00000588738 PTPRKQ15262 1439 aa28.69■■■□□ 2.18
ERCC1-207ENST00000588738 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
ERCC1-207ENST00000588738 LMTK3Q96Q04 1460 aa28.68■■■□□ 2.18
ERCC1-207ENST00000588738 ITGAEP38570 1179 aa28.68■■■□□ 2.18
ERCC1-207ENST00000588738 NPATQ14207 1427 aa28.65■■■□□ 2.18
ERCC1-207ENST00000588738 ROCK1Q13464 1354 aa28.63■■■□□ 2.17
ERCC1-207ENST00000588738 MROH1Q8NDA8 1641 aa28.63■■■□□ 2.17
ERCC1-207ENST00000588738 ZC3H13Q5T200 1668 aaKnown RBP28.63■■■□□ 2.17
ERCC1-207ENST00000588738 UHRF1BP1Q6BDS2 1440 aa28.61■■■□□ 2.17
ERCC1-207ENST00000588738 DEPDC5O75140 1603 aa28.6■■■□□ 2.17
ERCC1-207ENST00000588738 ANKRD50Q9ULJ7 1429 aa28.6■■■□□ 2.17
ERCC1-207ENST00000588738 ABCC3O15438 1527 aa28.59■■■□□ 2.17
ERCC1-207ENST00000588738 PRDM15P57071 1507 aaPredicted RBP28.59■■■□□ 2.17
ERCC1-207ENST00000588738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.58■■■□□ 2.175e-7■■□□□ 12.5
ERCC1-207ENST00000588738 CEP152O94986 1710 aa28.57■■■□□ 2.16
ERCC1-207ENST00000588738 PZPP20742 1482 aa28.56■■■□□ 2.16
ERCC1-207ENST00000588738 KANK1Q14678 1352 aa28.56■■■□□ 2.16
ERCC1-207ENST00000588738 HSPA2P54652 639 aa28.55■■■□□ 2.16
ERCC1-207ENST00000588738 CAMSAP1Q5T5Y3 1602 aa28.51■■■□□ 2.15
ERCC1-207ENST00000588738 FBXO31Q5XUX0 539 aaPredicted RBP28.51■■■□□ 2.15
ERCC1-207ENST00000588738 MYO3AQ8NEV4 1616 aa28.48■■■□□ 2.15
ERCC1-207ENST00000588738 VWDEQ8N2E2 1590 aa28.46■■■□□ 2.15
ERCC1-207ENST00000588738 TNRQ92752 1358 aa28.46■■■□□ 2.15
ERCC1-207ENST00000588738 CFAP65Q6ZU64 1925 aaKnown RBP28.45■■■□□ 2.15
ERCC1-207ENST00000588738 ARHGAP31Q2M1Z3 1444 aa28.43■■■□□ 2.14
ERCC1-207ENST00000588738 LMTK2Q8IWU2 1503 aa28.43■■■□□ 2.14
ERCC1-207ENST00000588738 ZNF142P52746 1687 aaPredicted RBP28.43■■■□□ 2.14
ERCC1-207ENST00000588738 UNC13BO14795 1591 aa28.41■■■□□ 2.14
ERCC1-207ENST00000588738 CEP170BQ9Y4F5 1589 aaPredicted RBP28.41■■■□□ 2.14
ERCC1-207ENST00000588738 SPATA31D1Q6ZQQ2 1576 aa28.4■■■□□ 2.14
ERCC1-207ENST00000588738 ERVK-7P63135 1459 aa28.39■■■□□ 2.13
ERCC1-207ENST00000588738 A2ML1A8K2U0 1454 aa28.38■■■□□ 2.13
ERCC1-207ENST00000588738 GCC2Q8IWJ2 1684 aa28.36■■■□□ 2.13
ERCC1-207ENST00000588738 NLRP1Q9C000 1473 aa28.36■■■□□ 2.13
ERCC1-207ENST00000588738 NAIPQ13075 1403 aa28.35■■■□□ 2.13
ERCC1-207ENST00000588738 EFCAB6Q5THR3 1501 aa28.34■■■□□ 2.13
ERCC1-207ENST00000588738 STRCQ7RTU9 1775 aa28.34■■■□□ 2.13
ERCC1-207ENST00000588738 TET3O43151 1660 aa28.33■■■□□ 2.13
ERCC1-207ENST00000588738 HFM1A2PYH4 1435 aa28.33■■■□□ 2.13
ERCC1-207ENST00000588738 NUP155O75694 1391 aa28.32■■■□□ 2.12
ERCC1-207ENST00000588738 IQGAP3Q86VI3 1631 aa28.31■■■□□ 2.12
ERCC1-207ENST00000588738 DMRT2Q9Y5R5 561 aa28.3■■■□□ 2.12
ERCC1-207ENST00000588738 RPRD2Q5VT52 1461 aaKnown RBP28.28■■■□□ 2.12
ERCC1-207ENST00000588738 THEMISQ8N1K5 641 aaPredicted RBP28.27■■■□□ 2.12
ERCC1-207ENST00000588738 UGGT1Q9NYU2 1555 aa28.27■■■□□ 2.12
ERCC1-207ENST00000588738 PLA2R1Q13018 1463 aa28.27■■■□□ 2.12
ERCC1-207ENST00000588738 NOS1P29475 1434 aa28.22■■■□□ 2.11
ERCC1-207ENST00000588738 PKD2Q13563 968 aa28.22■■■□□ 2.11
ERCC1-207ENST00000588738 E9PCH4 1651 aa28.22■■■□□ 2.11
ERCC1-207ENST00000588738 NCKAP5LQ9HCH0 1330 aa28.2■■■□□ 2.11
ERCC1-207ENST00000588738 SYNMO15061 1565 aa28.2■■■□□ 2.1
ERCC1-207ENST00000588738 PTPRTO14522 1441 aa28.18■■■□□ 2.1
ERCC1-207ENST00000588738 UBR1Q8IWV7 1749 aa28.18■■■□□ 2.1
ERCC1-207ENST00000588738 TRIM52Q96A61 297 aa28.18■■■□□ 2.1
ERCC1-207ENST00000588738 SLC52A1Q9NWF4 448 aa28.17■■■□□ 2.1
ERCC1-207ENST00000588738 IDI1Q13907 227 aa28.16■■■□□ 2.1
ERCC1-207ENST00000588738 PIK3C2BO00750 1634 aa28.16■■■□□ 2.1
ERCC1-207ENST00000588738 ANKLE2Q86XL3 938 aa28.15■■■□□ 2.1
ERCC1-207ENST00000588738 STAG3Q9UJ98 1225 aa28.15■■■□□ 2.1
ERCC1-207ENST00000588738 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
ERCC1-207ENST00000588738 KDM5AP29375 1690 aaKnown RBP28.13■■■□□ 2.09
ERCC1-207ENST00000588738 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
ERCC1-207ENST00000588738 ACIN1Q9UKV3 1341 aaKnown RBP28.07■■■□□ 2.08
ERCC1-207ENST00000588738 SLC4A1APQ9BWU0 796 aaKnown RBP28.06■■■□□ 2.08
ERCC1-207ENST00000588738 ADGRB3O60242 1522 aa28.05■■■□□ 2.08
ERCC1-207ENST00000588738 SLIT1O75093 1534 aa28.05■■■□□ 2.08
ERCC1-207ENST00000588738 SPHKAPQ2M3C7 1700 aa28.05■■■□□ 2.08
ERCC1-207ENST00000588738 NEURL4Q96JN8 1562 aa28.05■■■□□ 2.08
ERCC1-207ENST00000588738 ARHGAP23Q9P227 1491 aa28.03■■■□□ 2.08
ERCC1-207ENST00000588738 MED14O60244 1454 aa28.02■■■□□ 2.08
ERCC1-207ENST00000588738 TMEM2Q9UHN6 1383 aa28.02■■■□□ 2.08
ERCC1-207ENST00000588738 EID1Q9Y6B2 187 aa28.02■■■□□ 2.08
ERCC1-207ENST00000588738 TXNDC2Q86VQ3 553 aa28.01■■■□□ 2.07
ERCC1-207ENST00000588738 NPHP4O75161 1426 aaPredicted RBP28■■■□□ 2.07
ERCC1-207ENST00000588738 MYO5BQ9ULV0 1848 aa27.99■■■□□ 2.07
ERCC1-207ENST00000588738 SCAF11Q99590 1463 aaKnown RBP27.99■■■□□ 2.07
ERCC1-207ENST00000588738 TMEM131LA2VDJ0 1609 aa27.99■■■□□ 2.07
ERCC1-207ENST00000588738 CHGAP10645 457 aaKnown RBP27.98■■■□□ 2.07
ERCC1-207ENST00000588738 LTKP29376 864 aa27.98■■■□□ 2.07
ERCC1-207ENST00000588738 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
ERCC1-207ENST00000588738 RAB3GAP2Q9H2M9 1393 aa27.97■■■□□ 2.07
ERCC1-207ENST00000588738 MPHOSPH9Q99550 1183 aa27.94■■■□□ 2.06
ERCC1-207ENST00000588738 TRPM2O94759 1503 aa27.93■■■□□ 2.06
ERCC1-207ENST00000588738 HDGFP51858 240 aaKnown RBP27.92■■■□□ 2.06
ERCC1-207ENST00000588738 CERKQ8TCT0 537 aa27.92■■■□□ 2.06
ERCC1-207ENST00000588738 ZNF335Q9H4Z2 1342 aaPredicted RBP27.91■■■□□ 2.06
ERCC1-207ENST00000588738 LTBP4Q8N2S1 1624 aa27.89■■■□□ 2.06
ERCC1-207ENST00000588738 CLTCL1P53675 1640 aa27.89■■■□□ 2.05
ERCC1-207ENST00000588738 HRCP23327 699 aa27.88■■■□□ 2.05
ERCC1-207ENST00000588738 RIMS2Q9UQ26 1411 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms