RNA–Protein interactions for RNA: ENST00000588702.5

PRKAR1A-215, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-215	ENST00000588702	KANK1	Q14678	1352 aa		28.26	■■■□□ 2.12
PRKAR1A-215	ENST00000588702	RNF17	Q9BXT8	1623 aa	Known RBP	28.26	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	FAM135A	Q9P2D6	1515 aa		28.26	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	SETD5	Q9C0A6	1442 aa		28.26	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	ADAMTSL3	P82987	1691 aa		28.25	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	CNTLN	Q9NXG0	1405 aa		28.24	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	WASHC2C	Q9Y4E1	1318 aa		28.23	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.22	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	DEPDC5	O75140	1603 aa		28.21	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	HRC	P23327	699 aa		28.21	■■■□□ 2.11
PRKAR1A-215	ENST00000588702	FER1L4	A9Z1Z3	1794 aa		28.19	■■■□□ 2.1
PRKAR1A-215	ENST00000588702	PRDM15	P57071	1507 aa	Predicted RBP	28.18	■■■□□ 2.1
PRKAR1A-215	ENST00000588702	KDM4F	A0A1W2PPD8	638 aa		28.17	■■■□□ 2.1
PRKAR1A-215	ENST00000588702	UNC13B	O14795	1591 aa		28.16	■■■□□ 2.1
PRKAR1A-215	ENST00000588702	MADD	Q8WXG6	1647 aa		28.15	■■■□□ 2.1
PRKAR1A-215	ENST00000588702	KDM5D	Q9BY66	1539 aa		28.15	■■■□□ 2.1
PRKAR1A-215	ENST00000588702	ZC3H13	Q5T200	1668 aa	Known RBP	28.15	■■■□□ 2.1
PRKAR1A-215	ENST00000588702	MROH1	Q8NDA8	1641 aa		28.14	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	NUP155	O75694	1391 aa		28.13	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	TRIM52	Q96A61	297 aa		28.13	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	MROH2A	A6NES4	1674 aa		28.11	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	RAB3GAP2	Q9H2M9	1393 aa		28.11	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	CLTC	Q00610	1675 aa	Known RBP	28.1	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	ZMYM3	Q14202	1370 aa		28.1	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	RIMS1	Q86UR5	1692 aa	Known RBP	28.1	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	VWDE	Q8N2E2	1590 aa		28.09	■■■□□ 2.09
PRKAR1A-215	ENST00000588702	ABCC3	O15438	1527 aa		28.08	■■■□□ 2.08
PRKAR1A-215	ENST00000588702	LMTK2	Q8IWU2	1503 aa		28.08	■■■□□ 2.08
PRKAR1A-215	ENST00000588702	IQGAP3	Q86VI3	1631 aa		28.06	■■■□□ 2.08
PRKAR1A-215	ENST00000588702	PTPRM	P28827	1452 aa		28.05	■■■□□ 2.08
PRKAR1A-215	ENST00000588702	PCGF6	Q9BYE7	350 aa		28.04	■■■□□ 2.08
PRKAR1A-215	ENST00000588702	CEP152	O94986	1710 aa		28.04	■■■□□ 2.08
PRKAR1A-215	ENST00000588702	ARHGAP31	Q2M1Z3	1444 aa		28.02	■■■□□ 2.08
PRKAR1A-215	ENST00000588702	TET3	O43151	1660 aa		28	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	CAMSAP1	Q5T5Y3	1602 aa		28	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.99	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	C3	P01024	1663 aa		27.99	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	PZP	P20742	1482 aa		27.97	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	RPRD2	Q5VT52	1461 aa	Known RBP	27.97	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	CEBPA	P49715	358 aa	Predicted RBP	27.96	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	SETD1B	Q9UPS6	1966 aa	Known RBP	27.95	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	NPAT	Q14207	1427 aa		27.95	■■■□□ 2.07
PRKAR1A-215	ENST00000588702	EFCAB6	Q5THR3	1501 aa		27.95	■■■□□ 2.06
PRKAR1A-215	ENST00000588702	PLPPR3	Q6T4P5	718 aa		27.94	■■■□□ 2.06
PRKAR1A-215	ENST00000588702	MPHOSPH9	Q99550	1183 aa		27.94	■■■□□ 2.06
PRKAR1A-215	ENST00000588702	AEBP2	Q6ZN18	517 aa	Predicted RBP	27.9	■■■□□ 2.06
PRKAR1A-215	ENST00000588702	CFAP65	Q6ZU64	1925 aa	Known RBP	27.89	■■■□□ 2.06
PRKAR1A-215	ENST00000588702	PKD2	Q13563	968 aa		27.89	■■■□□ 2.06
PRKAR1A-215	ENST00000588702	FBXO31	Q5XUX0	539 aa	Predicted RBP	27.88	■■■□□ 2.05
PRKAR1A-215	ENST00000588702		E9PCH4	1651 aa		27.87	■■■□□ 2.05
PRKAR1A-215	ENST00000588702	SPATA31D1	Q6ZQQ2	1576 aa		27.85	■■■□□ 2.05
PRKAR1A-215	ENST00000588702	ERVK-7	P63135	1459 aa		27.84	■■■□□ 2.05
PRKAR1A-215	ENST00000588702	PREX1	Q8TCU6	1659 aa		27.84	■■■□□ 2.05
PRKAR1A-215	ENST00000588702	TNR	Q92752	1358 aa		27.84	■■■□□ 2.05
PRKAR1A-215	ENST00000588702	SLC52A1	Q9NWF4	448 aa		27.83	■■■□□ 2.05
PRKAR1A-215	ENST00000588702	NOS1	P29475	1434 aa		27.81	■■■□□ 2.04
PRKAR1A-215	ENST00000588702	NLRP1	Q9C000	1473 aa		27.77	■■■□□ 2.04
PRKAR1A-215	ENST00000588702	PTPRT	O14522	1441 aa		27.76	■■■□□ 2.04
PRKAR1A-215	ENST00000588702	UHRF1BP1	Q6BDS2	1440 aa		27.76	■■■□□ 2.04
PRKAR1A-215	ENST00000588702	SPHKAP	Q2M3C7	1700 aa		27.75	■■■□□ 2.03
PRKAR1A-215	ENST00000588702	FOXD1	Q16676	465 aa		27.71	■■■□□ 2.03
PRKAR1A-215	ENST00000588702	IDI1	Q13907	227 aa		27.7	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	MYO3A	Q8NEV4	1616 aa		27.7	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	SYNM	O15061	1565 aa		27.69	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	TRPM2	O94759	1503 aa		27.69	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	STAG3	Q9UJ98	1225 aa		27.69	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	A2ML1	A8K2U0	1454 aa		27.68	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	THEMIS	Q8N1K5	641 aa	Predicted RBP	27.67	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	CCDC144A	A2RUR9	1427 aa		27.65	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	27.65	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	PLA2R1	Q13018	1463 aa		27.64	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	PIK3C2B	O00750	1634 aa		27.64	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	ZNF142	P52746	1687 aa	Predicted RBP	27.64	■■■□□ 2.02
PRKAR1A-215	ENST00000588702	DHX57	Q6P158	1386 aa	Known RBP	27.63	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	ANKRD30B	Q9BXX2	1392 aa		27.63	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	KDM5A	P29375	1690 aa	Known RBP	27.63	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	UGGT1	Q9NYU2	1555 aa		27.62	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	LMTK3	Q96Q04	1460 aa		27.59	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	KIF1B	O60333	1816 aa		27.58	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	CHGA	P10645	457 aa	Known RBP	27.58	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	HDGF	P51858	240 aa	Known RBP	27.58	■■■□□ 2.01
PRKAR1A-215	ENST00000588702	CLTCL1	P53675	1640 aa		27.56	■■■□□ 2
PRKAR1A-215	ENST00000588702	UBR1	Q8IWV7	1749 aa		27.55	■■■□□ 2
PRKAR1A-215	ENST00000588702	ADGRB3	O60242	1522 aa		27.54	■■■□□ 2
PRKAR1A-215	ENST00000588702	CLSPN	Q9HAW4	1339 aa		27.53	■■■□□ 2
PRKAR1A-215	ENST00000588702	TMEM131L	A2VDJ0	1609 aa		27.52	■■■□□ 2
PRKAR1A-215	ENST00000588702	EID1	Q9Y6B2	187 aa		27.5	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	ZNF326	Q5BKZ1	582 aa	Known RBP	27.49	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	ANKLE2	Q86XL3	938 aa		27.49	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	NEURL4	Q96JN8	1562 aa		27.48	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	RPGRIP1L	Q68CZ1	1315 aa		27.48	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	HSPA2	P54652	639 aa		27.48	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	27.48	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	TMEM2	Q9UHN6	1383 aa		27.48	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	CCER1	Q8TC90	406 aa	Predicted RBP	27.47	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	SLIT1	O75093	1534 aa		27.46	■■□□□ 1.99
PRKAR1A-215	ENST00000588702	MYO5B	Q9ULV0	1848 aa		27.45	■■□□□ 1.98
PRKAR1A-215	ENST00000588702	TXNDC2	Q86VQ3	553 aa		27.43	■■□□□ 1.98
PRKAR1A-215	ENST00000588702	ARHGAP23	Q9P227	1491 aa		27.43	■■□□□ 1.98
PRKAR1A-215	ENST00000588702	SPATA31E1	Q6ZUB1	1445 aa		27.42	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms