RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
NFIX-211ENST00000588680 KDM5DQ9BY66 1539 aa12.75□□□□□ -0.37
NFIX-211ENST00000588680 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
NFIX-211ENST00000588680 RNF17Q9BXT8 1623 aaKnown RBP12.74□□□□□ -0.37
NFIX-211ENST00000588680 CCNB3Q8WWL7 1395 aa12.74□□□□□ -0.37
NFIX-211ENST00000588680 TNRQ92752 1358 aa12.74□□□□□ -0.37
NFIX-211ENST00000588680 TOM1O60784 492 aa12.74□□□□□ -0.37
NFIX-211ENST00000588680 SYNMO15061 1565 aa12.73□□□□□ -0.37
NFIX-211ENST00000588680 FAM135AQ9P2D6 1515 aa12.73□□□□□ -0.37
NFIX-211ENST00000588680 PZPP20742 1482 aa12.73□□□□□ -0.37
NFIX-211ENST00000588680 PHF23Q9BUL5 403 aaPredicted RBP12.73□□□□□ -0.37
NFIX-211ENST00000588680 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
NFIX-211ENST00000588680 UGGT1Q9NYU2 1555 aa12.7□□□□□ -0.38
NFIX-211ENST00000588680 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
NFIX-211ENST00000588680 NPHP4O75161 1426 aaPredicted RBP12.7□□□□□ -0.38
NFIX-211ENST00000588680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
NFIX-211ENST00000588680 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
NFIX-211ENST00000588680 MED14O60244 1454 aa12.69□□□□□ -0.38
NFIX-211ENST00000588680 NLRP1Q9C000 1473 aa12.69□□□□□ -0.38
NFIX-211ENST00000588680 FBXO31Q5XUX0 539 aaPredicted RBP12.68□□□□□ -0.38
NFIX-211ENST00000588680 RTEL1-TNFRSF6BF6WH68 1400 aa12.68□□□□□ -0.38
NFIX-211ENST00000588680 MTUS2Q5JR59 1369 aa12.68□□□□□ -0.38
NFIX-211ENST00000588680 DHX29Q7Z478 1369 aaKnown RBP12.68□□□□□ -0.38
NFIX-211ENST00000588680 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
NFIX-211ENST00000588680 ZNF644Q9H582 1327 aaPredicted RBP12.67□□□□□ -0.38
NFIX-211ENST00000588680 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
NFIX-211ENST00000588680 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
NFIX-211ENST00000588680 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
NFIX-211ENST00000588680 LRRC7Q96NW7 1537 aa12.66□□□□□ -0.38
NFIX-211ENST00000588680 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
NFIX-211ENST00000588680 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
NFIX-211ENST00000588680 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
NFIX-211ENST00000588680 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
NFIX-211ENST00000588680 KIF3BO15066 747 aa12.64□□□□□ -0.39
NFIX-211ENST00000588680 CEP152O94986 1710 aa12.63□□□□□ -0.39
NFIX-211ENST00000588680 UBR1Q8IWV7 1749 aa12.63□□□□□ -0.39
NFIX-211ENST00000588680 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
NFIX-211ENST00000588680 ABCC3O15438 1527 aa12.62□□□□□ -0.39
NFIX-211ENST00000588680 THEMISQ8N1K5 641 aaPredicted RBP12.62□□□□□ -0.39
NFIX-211ENST00000588680 WASHC2CQ9Y4E1 1318 aa12.62□□□□□ -0.39
NFIX-211ENST00000588680 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
NFIX-211ENST00000588680 CHIC1Q5VXU3 224 aa12.6□□□□□ -0.39
NFIX-211ENST00000588680 SETD1AO15047 1707 aaKnown RBP12.59□□□□□ -0.39
NFIX-211ENST00000588680 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
NFIX-211ENST00000588680 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
NFIX-211ENST00000588680 EIF2AK4Q9P2K8 1649 aaKnown RBP12.59□□□□□ -0.39
NFIX-211ENST00000588680 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
NFIX-211ENST00000588680 NCOA2Q15596 1464 aa12.57□□□□□ -0.4
NFIX-211ENST00000588680 SCAF11Q99590 1463 aaKnown RBP12.57□□□□□ -0.4
NFIX-211ENST00000588680 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
NFIX-211ENST00000588680 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
NFIX-211ENST00000588680 SLIT1O75093 1534 aa12.54□□□□□ -0.4
NFIX-211ENST00000588680 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
NFIX-211ENST00000588680 PIK3C2BO00750 1634 aa12.52□□□□□ -0.4
NFIX-211ENST00000588680 PRDM15P57071 1507 aaPredicted RBP12.5□□□□□ -0.41
NFIX-211ENST00000588680 MAP3K1Q13233 1512 aa12.5□□□□□ -0.41
NFIX-211ENST00000588680 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
NFIX-211ENST00000588680 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
NFIX-211ENST00000588680 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
NFIX-211ENST00000588680 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
NFIX-211ENST00000588680 CROCC2H7BZ55 1655 aa12.48□□□□□ -0.41
NFIX-211ENST00000588680 KDM5AP29375 1690 aaKnown RBP12.48□□□□□ -0.41
NFIX-211ENST00000588680 LTKP29376 864 aa12.48□□□□□ -0.41
NFIX-211ENST00000588680 DUOX2Q9NRD8 1548 aa12.47□□□□□ -0.41
NFIX-211ENST00000588680 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.41
NFIX-211ENST00000588680 TSPY4P0CV99 314 aa12.46□□□□□ -0.41
NFIX-211ENST00000588680 TSPY10P0CW01 314 aa12.46□□□□□ -0.41
NFIX-211ENST00000588680 NWD1Q149M9 1564 aa12.46□□□□□ -0.42
NFIX-211ENST00000588680 TMEM94Q12767 1356 aa12.45□□□□□ -0.42
NFIX-211ENST00000588680 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
NFIX-211ENST00000588680 ARHGAP31Q2M1Z3 1444 aa12.45□□□□□ -0.42
NFIX-211ENST00000588680 EFCAB6Q5THR3 1501 aa12.44□□□□□ -0.42
NFIX-211ENST00000588680 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
NFIX-211ENST00000588680 NKTRP30414 1462 aaKnown RBP12.43□□□□□ -0.42
NFIX-211ENST00000588680 TET3O43151 1660 aa12.42□□□□□ -0.42
NFIX-211ENST00000588680 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
NFIX-211ENST00000588680 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
NFIX-211ENST00000588680 EID1Q9Y6B2 187 aa12.42□□□□□ -0.42
NFIX-211ENST00000588680 ADGRB3O60242 1522 aa12.41□□□□□ -0.42
NFIX-211ENST00000588680 ERBINQ96RT1 1412 aa12.4□□□□□ -0.42
NFIX-211ENST00000588680 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
NFIX-211ENST00000588680 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
NFIX-211ENST00000588680 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
NFIX-211ENST00000588680 MYOM3Q5VTT5 1437 aa12.38□□□□□ -0.43
NFIX-211ENST00000588680 LRP6O75581 1613 aa12.38□□□□□ -0.43
NFIX-211ENST00000588680 KCNA6P17658 529 aa12.38□□□□□ -0.43
NFIX-211ENST00000588680 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
NFIX-211ENST00000588680 MSH6P52701 1360 aa12.37□□□□□ -0.43
NFIX-211ENST00000588680 JCADQ9P266 1359 aa12.37□□□□□ -0.43
NFIX-211ENST00000588680 SHPRHQ149N8 1683 aa12.37□□□□□ -0.43
NFIX-211ENST00000588680 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
NFIX-211ENST00000588680 LMTK2Q8IWU2 1503 aa12.37□□□□□ -0.43
NFIX-211ENST00000588680 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
NFIX-211ENST00000588680 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
NFIX-211ENST00000588680 PTPN23Q9H3S7 1636 aa12.35□□□□□ -0.43
NFIX-211ENST00000588680 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
NFIX-211ENST00000588680 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.43
NFIX-211ENST00000588680 KANK1Q14678 1352 aa12.33□□□□□ -0.44
NFIX-211ENST00000588680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
NFIX-211ENST00000588680 ABCC5O15440 1437 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms