RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TRIM52Q96A61 297 aa33.5■■■□□ 2.95
ACTN4-210ENST00000588618 MROH1Q8NDA8 1641 aa33.48■■■□□ 2.95
ACTN4-210ENST00000588618 KIF3BO15066 747 aa33.48■■■□□ 2.95
ACTN4-210ENST00000588618 KDM5DQ9BY66 1539 aa33.46■■■□□ 2.95
ACTN4-210ENST00000588618 RNF17Q9BXT8 1623 aaKnown RBP33.46■■■□□ 2.95
ACTN4-210ENST00000588618 PZPP20742 1482 aa33.45■■■□□ 2.95
ACTN4-210ENST00000588618 PRDM15P57071 1507 aaPredicted RBP33.41■■■□□ 2.94
ACTN4-210ENST00000588618 NUP155O75694 1391 aa33.41■■■□□ 2.94
ACTN4-210ENST00000588618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.4■■■□□ 2.943e-11■■□□□ 11.5
ACTN4-210ENST00000588618 IQGAP3Q86VI3 1631 aa33.4■■■□□ 2.94
ACTN4-210ENST00000588618 AGLP35573 1532 aa33.39■■■□□ 2.94
ACTN4-210ENST00000588618 CCER1Q8TC90 406 aaPredicted RBP33.36■■■□□ 2.93
ACTN4-210ENST00000588618 FAM135AQ9P2D6 1515 aa33.36■■■□□ 2.93
ACTN4-210ENST00000588618 VWDEQ8N2E2 1590 aa33.36■■■□□ 2.93
ACTN4-210ENST00000588618 ARID4BQ4LE39 1312 aaPredicted RBP33.35■■■□□ 2.93
ACTN4-210ENST00000588618 KANK1Q14678 1352 aa33.34■■■□□ 2.93
ACTN4-210ENST00000588618 GGT6Q6P531 493 aa33.34■■■□□ 2.93
ACTN4-210ENST00000588618 MPHOSPH9Q99550 1183 aa33.34■■■□□ 2.93
ACTN4-210ENST00000588618 SLC4A1APQ9BWU0 796 aaKnown RBP33.3■■■□□ 2.92
ACTN4-210ENST00000588618 CEP152O94986 1710 aa33.29■■■□□ 2.92
ACTN4-210ENST00000588618 MLECQ14165 292 aa33.23■■■□□ 2.91
ACTN4-210ENST00000588618 FOXD1Q16676 465 aa33.23■■■□□ 2.91
ACTN4-210ENST00000588618 TET3O43151 1660 aa33.22■■■□□ 2.91
ACTN4-210ENST00000588618 ABCC3O15438 1527 aa33.21■■■□□ 2.91
ACTN4-210ENST00000588618 LMTK2Q8IWU2 1503 aa33.2■■■□□ 2.91
ACTN4-210ENST00000588618 PKD2Q13563 968 aa33.2■■■□□ 2.91
ACTN4-210ENST00000588618 WASHC2CQ9Y4E1 1318 aa33.2■■■□□ 2.91
ACTN4-210ENST00000588618 E9PCH4 1651 aa33.19■■■□□ 2.9
ACTN4-210ENST00000588618 ZC3H13Q5T200 1668 aaKnown RBP33.17■■■□□ 2.9
ACTN4-210ENST00000588618 PPP6R1Q9UPN7 881 aa33.17■■■□□ 2.9
ACTN4-210ENST00000588618 ESF1Q9H501 851 aaKnown RBP33.16■■■□□ 2.9
ACTN4-210ENST00000588618 EFCAB6Q5THR3 1501 aa33.15■■■□□ 2.9
ACTN4-210ENST00000588618 CAMSAP1Q5T5Y3 1602 aa33.14■■■□□ 2.9
ACTN4-210ENST00000588618 CLSPNQ9HAW4 1339 aa33.13■■■□□ 2.89
ACTN4-210ENST00000588618 CLTCQ00610 1675 aaKnown RBP33.11■■■□□ 2.89
ACTN4-210ENST00000588618 ANKRD30BQ9BXX2 1392 aa33.1■■■□□ 2.89
ACTN4-210ENST00000588618 CFAP65Q6ZU64 1925 aaKnown RBP33.05■■■□□ 2.88
ACTN4-210ENST00000588618 PLA2R1Q13018 1463 aa33.05■■■□□ 2.88
ACTN4-210ENST00000588618 NPATQ14207 1427 aa33.05■■■□□ 2.88
ACTN4-210ENST00000588618 SIN3AQ96ST3 1273 aa33.05■■■□□ 2.88
ACTN4-210ENST00000588618 SPHKAPQ2M3C7 1700 aa33.02■■■□□ 2.88
ACTN4-210ENST00000588618 FER1L4A9Z1Z3 1794 aa32.99■■■□□ 2.87
ACTN4-210ENST00000588618 CNTLNQ9NXG0 1405 aa32.99■■■□□ 2.87
ACTN4-210ENST00000588618 RPRD2Q5VT52 1461 aaKnown RBP32.98■■■□□ 2.87
ACTN4-210ENST00000588618 ARHGAP31Q2M1Z3 1444 aa32.98■■■□□ 2.87
ACTN4-210ENST00000588618 PTPRTO14522 1441 aa32.96■■■□□ 2.87
ACTN4-210ENST00000588618 TRPM2O94759 1503 aa32.94■■■□□ 2.86
ACTN4-210ENST00000588618 MROH2AA6NES4 1674 aa32.94■■■□□ 2.86
ACTN4-210ENST00000588618 ADAMTSL3P82987 1691 aa32.93■■■□□ 2.86
ACTN4-210ENST00000588618 PREX1Q8TCU6 1659 aa32.92■■■□□ 2.86
ACTN4-210ENST00000588618 MADDQ8WXG6 1647 aa32.92■■■□□ 2.86
ACTN4-210ENST00000588618 NEUROD1Q13562 356 aa32.92■■■□□ 2.86
ACTN4-210ENST00000588618 ZMYM3Q14202 1370 aa32.89■■■□□ 2.86
ACTN4-210ENST00000588618 CLTCL1P53675 1640 aa32.88■■■□□ 2.85
ACTN4-210ENST00000588618 NOS1P29475 1434 aa32.88■■■□□ 2.85
ACTN4-210ENST00000588618 SYNMO15061 1565 aa32.88■■■□□ 2.85
ACTN4-210ENST00000588618 UGGT1Q9NYU2 1555 aa32.87■■■□□ 2.85
ACTN4-210ENST00000588618 CCDC144AA2RUR9 1427 aa32.85■■■□□ 2.85
ACTN4-210ENST00000588618 C3P01024 1663 aa32.85■■■□□ 2.85
ACTN4-210ENST00000588618 RIMS1Q86UR5 1692 aaKnown RBP32.85■■■□□ 2.85
ACTN4-210ENST00000588618 ERVK-7P63135 1459 aa32.84■■■□□ 2.85
ACTN4-210ENST00000588618 FBXO31Q5XUX0 539 aaPredicted RBP32.83■■■□□ 2.85
ACTN4-210ENST00000588618 SPATA31D1Q6ZQQ2 1576 aa32.81■■■□□ 2.84
ACTN4-210ENST00000588618 PIK3C2BO00750 1634 aa32.8■■■□□ 2.84
ACTN4-210ENST00000588618 ZEB1P37275 1124 aaPredicted RBP32.77■■■□□ 2.84
ACTN4-210ENST00000588618 PLPPR3Q6T4P5 718 aa32.77■■■□□ 2.84
ACTN4-210ENST00000588618 CEBPAP49715 358 aaPredicted RBP32.74■■■□□ 2.83
ACTN4-210ENST00000588618 KIF1BO60333 1816 aa32.72■■■□□ 2.83
ACTN4-210ENST00000588618 TONSLQ96HA7 1378 aa32.71■■■□□ 2.83
ACTN4-210ENST00000588618 SPATA31E1Q6ZUB1 1445 aa32.7■■■□□ 2.82
ACTN4-210ENST00000588618 SLC52A1Q9NWF4 448 aa32.69■■■□□ 2.82
ACTN4-210ENST00000588618 TNRQ92752 1358 aa32.66■■■□□ 2.82
ACTN4-210ENST00000588618 L3MBTL2Q969R5 705 aa32.65■■■□□ 2.82
ACTN4-210ENST00000588618 TIMELESSQ9UNS1 1208 aa32.65■■■□□ 2.82
ACTN4-210ENST00000588618 ADGRB3O60242 1522 aa32.64■■■□□ 2.82
ACTN4-210ENST00000588618 MYO5BQ9ULV0 1848 aa32.64■■■□□ 2.82
ACTN4-210ENST00000588618 IDI1Q13907 227 aa32.64■■■□□ 2.82
ACTN4-210ENST00000588618 NEURL4Q96JN8 1562 aa32.63■■■□□ 2.81
ACTN4-210ENST00000588618 CHGAP10645 457 aaKnown RBP32.62■■■□□ 2.81
ACTN4-210ENST00000588618 PTPRMP28827 1452 aa32.61■■■□□ 2.81
ACTN4-210ENST00000588618 TMEM131LA2VDJ0 1609 aa32.6■■■□□ 2.81
ACTN4-210ENST00000588618 RGL3Q3MIN7 710 aa32.6■■■□□ 2.81
ACTN4-210ENST00000588618 STAG3Q9UJ98 1225 aa32.58■■■□□ 2.81
ACTN4-210ENST00000588618 KDM4FA0A1W2PPD8 638 aa32.55■■■□□ 2.8
ACTN4-210ENST00000588618 PPP1R15AO75807 674 aaPredicted RBP32.54■■■□□ 2.8
ACTN4-210ENST00000588618 IFT172Q9UG01 1749 aa32.54■■■□□ 2.8
ACTN4-210ENST00000588618 MYO3AQ8NEV4 1616 aa32.52■■■□□ 2.8
ACTN4-210ENST00000588618 ZNF326Q5BKZ1 582 aaKnown RBP32.52■■■□□ 2.8
ACTN4-210ENST00000588618 NLRP1Q9C000 1473 aa32.52■■■□□ 2.8
ACTN4-210ENST00000588618 UBR1Q8IWV7 1749 aa32.49■■■□□ 2.79
ACTN4-210ENST00000588618 PPLO60437 1756 aa32.48■■■□□ 2.79
ACTN4-210ENST00000588618 DCAF11Q8TEB1 546 aa32.48■■■□□ 2.79
ACTN4-210ENST00000588618 A2ML1A8K2U0 1454 aa32.48■■■□□ 2.79
ACTN4-210ENST00000588618 SETD1BQ9UPS6 1966 aaKnown RBP32.47■■■□□ 2.79
ACTN4-210ENST00000588618 KDM5AP29375 1690 aaKnown RBP32.46■■■□□ 2.79
ACTN4-210ENST00000588618 NEXMIFQ5QGS0 1516 aa32.44■■■□□ 2.78
ACTN4-210ENST00000588618 NBPF8Q3BBV2 869 aa32.43■■■□□ 2.78
ACTN4-210ENST00000588618 KDM2AQ9Y2K7 1162 aa32.43■■■□□ 2.78
ACTN4-210ENST00000588618 UHRF1BP1Q6BDS2 1440 aa32.41■■■□□ 2.78
ACTN4-210ENST00000588618 RPGRIP1LQ68CZ1 1315 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms