RNA–Protein interactions for RNA: ENST00000587600.1

LDLRAD4-210, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-210ENST00000587600 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
LDLRAD4-210ENST00000587600 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
LDLRAD4-210ENST00000587600 FAM135AQ9P2D6 1515 aa19.76■□□□□ 0.75
LDLRAD4-210ENST00000587600 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
LDLRAD4-210ENST00000587600 KDM5DQ9BY66 1539 aa19.75■□□□□ 0.75
LDLRAD4-210ENST00000587600 KANK1Q14678 1352 aa19.74■□□□□ 0.75
LDLRAD4-210ENST00000587600 NUP155O75694 1391 aa19.71■□□□□ 0.75
LDLRAD4-210ENST00000587600 TRIM52Q96A61 297 aa19.7■□□□□ 0.74
LDLRAD4-210ENST00000587600 VWDEQ8N2E2 1590 aa19.69■□□□□ 0.74
LDLRAD4-210ENST00000587600 MROH1Q8NDA8 1641 aa19.69■□□□□ 0.74
LDLRAD4-210ENST00000587600 ARID4BQ4LE39 1312 aaPredicted RBP19.68■□□□□ 0.74
LDLRAD4-210ENST00000587600 IQGAP3Q86VI3 1631 aa19.68■□□□□ 0.74
LDLRAD4-210ENST00000587600 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
LDLRAD4-210ENST00000587600 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
LDLRAD4-210ENST00000587600 GGT6Q6P531 493 aa19.66■□□□□ 0.74
LDLRAD4-210ENST00000587600 ZC3H13Q5T200 1668 aaKnown RBP19.65■□□□□ 0.74
LDLRAD4-210ENST00000587600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.74
LDLRAD4-210ENST00000587600 SIGLEC1Q9BZZ2 1709 aa19.65■□□□□ 0.74
LDLRAD4-210ENST00000587600 PZPP20742 1482 aa19.64■□□□□ 0.73
LDLRAD4-210ENST00000587600 CNTLNQ9NXG0 1405 aa19.63■□□□□ 0.73
LDLRAD4-210ENST00000587600 WASHC2CQ9Y4E1 1318 aa19.63■□□□□ 0.73
LDLRAD4-210ENST00000587600 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
LDLRAD4-210ENST00000587600 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
LDLRAD4-210ENST00000587600 ABCC3O15438 1527 aa19.61■□□□□ 0.73
LDLRAD4-210ENST00000587600 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
LDLRAD4-210ENST00000587600 CLSPNQ9HAW4 1339 aa19.61■□□□□ 0.73
LDLRAD4-210ENST00000587600 TET3O43151 1660 aa19.6■□□□□ 0.73
LDLRAD4-210ENST00000587600 ESF1Q9H501 851 aaKnown RBP19.6■□□□□ 0.73
LDLRAD4-210ENST00000587600 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
LDLRAD4-210ENST00000587600 ARHGAP31Q2M1Z3 1444 aa19.59■□□□□ 0.73
LDLRAD4-210ENST00000587600 EFCAB6Q5THR3 1501 aa19.57■□□□□ 0.72
LDLRAD4-210ENST00000587600 MLECQ14165 292 aa19.56■□□□□ 0.72
LDLRAD4-210ENST00000587600 PKD2Q13563 968 aa19.55■□□□□ 0.72
LDLRAD4-210ENST00000587600 CAMSAP1Q5T5Y3 1602 aa19.54■□□□□ 0.72
LDLRAD4-210ENST00000587600 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
LDLRAD4-210ENST00000587600 MROH2AA6NES4 1674 aa19.52■□□□□ 0.72
LDLRAD4-210ENST00000587600 CEP152O94986 1710 aa19.51■□□□□ 0.71
LDLRAD4-210ENST00000587600 NPATQ14207 1427 aa19.51■□□□□ 0.71
LDLRAD4-210ENST00000587600 ADAMTSL3P82987 1691 aa19.5■□□□□ 0.71
LDLRAD4-210ENST00000587600 CLTCQ00610 1675 aaKnown RBP19.49■□□□□ 0.71
LDLRAD4-210ENST00000587600 ZMYM3Q14202 1370 aa19.49■□□□□ 0.71
LDLRAD4-210ENST00000587600 PTPRTO14522 1441 aa19.49■□□□□ 0.71
LDLRAD4-210ENST00000587600 E9PCH4 1651 aa19.49■□□□□ 0.71
LDLRAD4-210ENST00000587600 FER1L4A9Z1Z3 1794 aa19.47■□□□□ 0.71
LDLRAD4-210ENST00000587600 ANKRD30BQ9BXX2 1392 aa19.47■□□□□ 0.71
LDLRAD4-210ENST00000587600 MADDQ8WXG6 1647 aa19.45■□□□□ 0.7
LDLRAD4-210ENST00000587600 TRPM2O94759 1503 aa19.45■□□□□ 0.7
LDLRAD4-210ENST00000587600 NOS1P29475 1434 aa19.44■□□□□ 0.7
LDLRAD4-210ENST00000587600 SPATA31D1Q6ZQQ2 1576 aa19.42■□□□□ 0.7
LDLRAD4-210ENST00000587600 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
LDLRAD4-210ENST00000587600 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
LDLRAD4-210ENST00000587600 FOXD1Q16676 465 aa19.41■□□□□ 0.7
LDLRAD4-210ENST00000587600 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
LDLRAD4-210ENST00000587600 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
LDLRAD4-210ENST00000587600 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
LDLRAD4-210ENST00000587600 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
LDLRAD4-210ENST00000587600 RIMS1Q86UR5 1692 aaKnown RBP19.38■□□□□ 0.69
LDLRAD4-210ENST00000587600 TIMELESSQ9UNS1 1208 aa19.38■□□□□ 0.69
LDLRAD4-210ENST00000587600 KDM4FA0A1W2PPD8 638 aa19.37■□□□□ 0.69
LDLRAD4-210ENST00000587600 C3P01024 1663 aa19.36■□□□□ 0.69
LDLRAD4-210ENST00000587600 PTPRMP28827 1452 aa19.36■□□□□ 0.69
LDLRAD4-210ENST00000587600 NEURL4Q96JN8 1562 aa19.36■□□□□ 0.69
LDLRAD4-210ENST00000587600 FBXO31Q5XUX0 539 aaPredicted RBP19.35■□□□□ 0.69
LDLRAD4-210ENST00000587600 TNRQ92752 1358 aa19.34■□□□□ 0.69
LDLRAD4-210ENST00000587600 SYNMO15061 1565 aa19.34■□□□□ 0.69
LDLRAD4-210ENST00000587600 NLRP1Q9C000 1473 aa19.34■□□□□ 0.69
LDLRAD4-210ENST00000587600 PIK3C2BO00750 1634 aa19.33■□□□□ 0.69
LDLRAD4-210ENST00000587600 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
LDLRAD4-210ENST00000587600 CLTCL1P53675 1640 aa19.3■□□□□ 0.68
LDLRAD4-210ENST00000587600 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
LDLRAD4-210ENST00000587600 SIN3AQ96ST3 1273 aa19.29■□□□□ 0.68
LDLRAD4-210ENST00000587600 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
LDLRAD4-210ENST00000587600 NEUROD1Q13562 356 aa19.27■□□□□ 0.68
LDLRAD4-210ENST00000587600 IDI1Q13907 227 aa19.27■□□□□ 0.68
LDLRAD4-210ENST00000587600 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
LDLRAD4-210ENST00000587600 TONSLQ96HA7 1378 aa19.27■□□□□ 0.68
LDLRAD4-210ENST00000587600 KDM5AP29375 1690 aaKnown RBP19.27■□□□□ 0.67
LDLRAD4-210ENST00000587600 UGGT1Q9NYU2 1555 aa19.26■□□□□ 0.67
LDLRAD4-210ENST00000587600 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
LDLRAD4-210ENST00000587600 RPGRIP1LQ68CZ1 1315 aa19.24■□□□□ 0.67
LDLRAD4-210ENST00000587600 KIF1BO60333 1816 aa19.23■□□□□ 0.67
LDLRAD4-210ENST00000587600 A2ML1A8K2U0 1454 aa19.22■□□□□ 0.67
LDLRAD4-210ENST00000587600 MYO3AQ8NEV4 1616 aa19.22■□□□□ 0.67
LDLRAD4-210ENST00000587600 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
LDLRAD4-210ENST00000587600 TMEM131LA2VDJ0 1609 aa19.21■□□□□ 0.67
LDLRAD4-210ENST00000587600 UHRF1BP1Q6BDS2 1440 aa19.2■□□□□ 0.66
LDLRAD4-210ENST00000587600 CFAP65Q6ZU64 1925 aaKnown RBP19.19■□□□□ 0.66
LDLRAD4-210ENST00000587600 SETD1BQ9UPS6 1966 aaKnown RBP19.19■□□□□ 0.66
LDLRAD4-210ENST00000587600 CEP170BQ9Y4F5 1589 aaPredicted RBP19.19■□□□□ 0.66
LDLRAD4-210ENST00000587600 ZNF142P52746 1687 aaPredicted RBP19.18■□□□□ 0.66
LDLRAD4-210ENST00000587600 HDGFP51858 240 aaKnown RBP19.18■□□□□ 0.66
LDLRAD4-210ENST00000587600 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
LDLRAD4-210ENST00000587600 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
LDLRAD4-210ENST00000587600 CHGAP10645 457 aaKnown RBP19.17■□□□□ 0.66
LDLRAD4-210ENST00000587600 L3MBTL2Q969R5 705 aa19.17■□□□□ 0.66
LDLRAD4-210ENST00000587600 ZNF326Q5BKZ1 582 aaKnown RBP19.16■□□□□ 0.66
LDLRAD4-210ENST00000587600 UBR1Q8IWV7 1749 aa19.15■□□□□ 0.66
LDLRAD4-210ENST00000587600 RGL3Q3MIN7 710 aa19.15■□□□□ 0.66
LDLRAD4-210ENST00000587600 ZFYVE9O95405 1425 aa19.15■□□□□ 0.66
LDLRAD4-210ENST00000587600 MYOM2P54296 1465 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms