RNA–Protein interactions for RNA: ENST00000587494.1

C19orf38-202, Transcript of chromosome 19 open reading frame 38, humanhuman

TSL 3

Gene C19orf38, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf38-202ENST00000587494 SHANK2Q9UPX8 1470 aa23.61■■□□□ 1.37
C19orf38-202ENST00000587494 FAM135AQ9P2D6 1515 aa23.6■■□□□ 1.37
C19orf38-202ENST00000587494 ABCC5O15440 1437 aa23.59■■□□□ 1.37
C19orf38-202ENST00000587494 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
C19orf38-202ENST00000587494 DUOX2Q9NRD8 1548 aa23.58■■□□□ 1.36
C19orf38-202ENST00000587494 DAPK1P53355 1430 aa23.58■■□□□ 1.36
C19orf38-202ENST00000587494 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
C19orf38-202ENST00000587494 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
C19orf38-202ENST00000587494 CEP152O94986 1710 aa23.55■■□□□ 1.36
C19orf38-202ENST00000587494 MROH1Q8NDA8 1641 aa23.54■■□□□ 1.36
C19orf38-202ENST00000587494 CFAP65Q6ZU64 1925 aaKnown RBP23.52■■□□□ 1.36
C19orf38-202ENST00000587494 CEP170BQ9Y4F5 1589 aaPredicted RBP23.52■■□□□ 1.36
C19orf38-202ENST00000587494 KIF15Q9NS87 1388 aa23.52■■□□□ 1.36
C19orf38-202ENST00000587494 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
C19orf38-202ENST00000587494 PZPP20742 1482 aa23.49■■□□□ 1.35
C19orf38-202ENST00000587494 CAMSAP1Q5T5Y3 1602 aa23.49■■□□□ 1.35
C19orf38-202ENST00000587494 ABCC3O15438 1527 aa23.49■■□□□ 1.35
C19orf38-202ENST00000587494 ERBINQ96RT1 1412 aa23.48■■□□□ 1.35
C19orf38-202ENST00000587494 RRP7BPQ9NSQ0 103 aa23.47■■□□□ 1.35
C19orf38-202ENST00000587494 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
C19orf38-202ENST00000587494 FAM50AQ14320 339 aaKnown RBP23.46■■□□□ 1.35
C19orf38-202ENST00000587494 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
C19orf38-202ENST00000587494 CHIC2Q9UKJ5 165 aa23.45■■□□□ 1.34
C19orf38-202ENST00000587494 NCOA1Q15788 1441 aa23.44■■□□□ 1.34
C19orf38-202ENST00000587494 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
C19orf38-202ENST00000587494 ILDR1Q86SU0 546 aaPredicted RBP23.43■■□□□ 1.34
C19orf38-202ENST00000587494 FBXO31Q5XUX0 539 aaPredicted RBP23.42■■□□□ 1.34
C19orf38-202ENST00000587494 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
C19orf38-202ENST00000587494 DMRT2Q9Y5R5 561 aa23.41■■□□□ 1.34
C19orf38-202ENST00000587494 A2ML1A8K2U0 1454 aa23.41■■□□□ 1.34
C19orf38-202ENST00000587494 TNRQ92752 1358 aa23.4■■□□□ 1.34
C19orf38-202ENST00000587494 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
C19orf38-202ENST00000587494 POLR1AO95602 1720 aaPredicted RBP23.39■■□□□ 1.34
C19orf38-202ENST00000587494 PTPRTO14522 1441 aa23.38■■□□□ 1.33
C19orf38-202ENST00000587494 PLA2R1Q13018 1463 aa23.37■■□□□ 1.33
C19orf38-202ENST00000587494 SPATA31D1Q6ZQQ2 1576 aa23.37■■□□□ 1.33
C19orf38-202ENST00000587494 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
C19orf38-202ENST00000587494 NLRP1Q9C000 1473 aa23.33■■□□□ 1.33
C19orf38-202ENST00000587494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.32
C19orf38-202ENST00000587494 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
C19orf38-202ENST00000587494 KANK1Q14678 1352 aa23.31■■□□□ 1.32
C19orf38-202ENST00000587494 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
C19orf38-202ENST00000587494 NCKAP5LQ9HCH0 1330 aa23.31■■□□□ 1.32
C19orf38-202ENST00000587494 FBXO41Q8TF61 875 aa23.29■■□□□ 1.32
C19orf38-202ENST00000587494 ARHGAP31Q2M1Z3 1444 aa23.28■■□□□ 1.32
C19orf38-202ENST00000587494 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
C19orf38-202ENST00000587494 UBR1Q8IWV7 1749 aa23.28■■□□□ 1.32
C19orf38-202ENST00000587494 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
C19orf38-202ENST00000587494 PKD2Q13563 968 aa23.27■■□□□ 1.32
C19orf38-202ENST00000587494 CERKQ8TCT0 537 aa23.26■■□□□ 1.31
C19orf38-202ENST00000587494 NEURL4Q96JN8 1562 aa23.26■■□□□ 1.31
C19orf38-202ENST00000587494 UNC13BO14795 1591 aa23.25■■□□□ 1.31
C19orf38-202ENST00000587494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
C19orf38-202ENST00000587494 EFCAB6Q5THR3 1501 aa23.24■■□□□ 1.31
C19orf38-202ENST00000587494 LTBP4Q8N2S1 1624 aa23.23■■□□□ 1.31
C19orf38-202ENST00000587494 GCC2Q8IWJ2 1684 aa23.23■■□□□ 1.31
C19orf38-202ENST00000587494 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
C19orf38-202ENST00000587494 ITGAEP38570 1179 aa23.22■■□□□ 1.31
C19orf38-202ENST00000587494 TET3O43151 1660 aa23.22■■□□□ 1.31
C19orf38-202ENST00000587494 THEMISQ8N1K5 641 aaPredicted RBP23.21■■□□□ 1.31
C19orf38-202ENST00000587494 PIK3C2BO00750 1634 aa23.21■■□□□ 1.31
C19orf38-202ENST00000587494 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
C19orf38-202ENST00000587494 IQGAP1P46940 1657 aa23.18■■□□□ 1.3
C19orf38-202ENST00000587494 SYNMO15061 1565 aa23.18■■□□□ 1.3
C19orf38-202ENST00000587494 KDM5AP29375 1690 aaKnown RBP23.16■■□□□ 1.3
C19orf38-202ENST00000587494 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
C19orf38-202ENST00000587494 ANKLE2Q86XL3 938 aa23.15■■□□□ 1.3
C19orf38-202ENST00000587494 E9PCH4 1651 aa23.14■■□□□ 1.29
C19orf38-202ENST00000587494 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
C19orf38-202ENST00000587494 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
C19orf38-202ENST00000587494 MED14O60244 1454 aa23.12■■□□□ 1.29
C19orf38-202ENST00000587494 RPRD2Q5VT52 1461 aaKnown RBP23.12■■□□□ 1.29
C19orf38-202ENST00000587494 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
C19orf38-202ENST00000587494 NOS1P29475 1434 aa23.1■■□□□ 1.29
C19orf38-202ENST00000587494 IQSEC2Q5JU85 1478 aa23.1■■□□□ 1.29
C19orf38-202ENST00000587494 SLIT1O75093 1534 aa23.09■■□□□ 1.29
C19orf38-202ENST00000587494 ARHGAP23Q9P227 1491 aa23.07■■□□□ 1.28
C19orf38-202ENST00000587494 ADGRB3O60242 1522 aa23.07■■□□□ 1.28
C19orf38-202ENST00000587494 SCAF11Q99590 1463 aaKnown RBP23.06■■□□□ 1.28
C19orf38-202ENST00000587494 STRCP1A6NGW2 1772 aa23.04■■□□□ 1.28
C19orf38-202ENST00000587494 IDI1Q13907 227 aa23.04■■□□□ 1.28
C19orf38-202ENST00000587494 STAG3Q9UJ98 1225 aa23.04■■□□□ 1.28
C19orf38-202ENST00000587494 NUP155O75694 1391 aa23.02■■□□□ 1.28
C19orf38-202ENST00000587494 CPS1P31327 1500 aa23.02■■□□□ 1.28
C19orf38-202ENST00000587494 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
C19orf38-202ENST00000587494 SPHKAPQ2M3C7 1700 aa23■■□□□ 1.27
C19orf38-202ENST00000587494 LTKP29376 864 aa22.99■■□□□ 1.27
C19orf38-202ENST00000587494 TXNDC2Q86VQ3 553 aa22.99■■□□□ 1.27
C19orf38-202ENST00000587494 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
C19orf38-202ENST00000587494 TMEM131LA2VDJ0 1609 aa22.99■■□□□ 1.27
C19orf38-202ENST00000587494 NAIPQ13075 1403 aa22.99■■□□□ 1.27
C19orf38-202ENST00000587494 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
C19orf38-202ENST00000587494 HFM1A2PYH4 1435 aa22.93■■□□□ 1.26
C19orf38-202ENST00000587494 XIRP1Q702N8 1843 aaKnown RBP22.89■■□□□ 1.26
C19orf38-202ENST00000587494 UBAP1LF5GYI3 381 aa22.88■■□□□ 1.25
C19orf38-202ENST00000587494 ZFYVE9O95405 1425 aa22.88■■□□□ 1.25
C19orf38-202ENST00000587494 RIMS2Q9UQ26 1411 aa22.86■■□□□ 1.25
C19orf38-202ENST00000587494 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
C19orf38-202ENST00000587494 KIF1BO60333 1816 aa22.86■■□□□ 1.25
C19orf38-202ENST00000587494 LRRC7Q96NW7 1537 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms