RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 C3orf67Q6ZVT6 689 aa8.79□□□□□ -1
TUBD1-207ENST00000587476 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
TUBD1-207ENST00000587476 PHF14O94880 888 aa8.78□□□□□ -1
TUBD1-207ENST00000587476 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
TUBD1-207ENST00000587476 PCMTD1Q96MG8 357 aaPredicted RBP8.78□□□□□ -1
TUBD1-207ENST00000587476 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.78□□□□□ -1
TUBD1-207ENST00000587476 MAP3K7O43318 606 aa8.76□□□□□ -1.01
TUBD1-207ENST00000587476 MS4A1P11836 297 aa8.76□□□□□ -1.01
TUBD1-207ENST00000587476 CLCN1P35523 988 aa8.76□□□□□ -1.01
TUBD1-207ENST00000587476 CDHR5Q9HBB8 845 aa8.76□□□□□ -1.01
TUBD1-207ENST00000587476 GPCPD1Q9NPB8 672 aa8.74□□□□□ -1.01
TUBD1-207ENST00000587476 SH3D19Q5HYK7 790 aa8.73□□□□□ -1.01
TUBD1-207ENST00000587476 NPDC1Q9NQX5 325 aaPredicted RBP8.73□□□□□ -1.01
TUBD1-207ENST00000587476 TYW1BQ6NUM6 668 aa8.72□□□□□ -1.01
TUBD1-207ENST00000587476 TMUB1Q9BVT8 246 aa8.72□□□□□ -1.01
TUBD1-207ENST00000587476 REPIN1Q9BWE0 567 aaKnown RBP8.72□□□□□ -1.01
TUBD1-207ENST00000587476 UBTFP17480 764 aaKnown RBP8.71□□□□□ -1.02
TUBD1-207ENST00000587476 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
TUBD1-207ENST00000587476 RBM33Q96EV2 1170 aaKnown RBP8.71□□□□□ -1.02
TUBD1-207ENST00000587476 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
TUBD1-207ENST00000587476 ONECUT3O60422 494 aaPredicted RBP8.7□□□□□ -1.02
TUBD1-207ENST00000587476 MDM2Q00987 491 aaPredicted RBP8.7□□□□□ -1.02
TUBD1-207ENST00000587476 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
TUBD1-207ENST00000587476 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
TUBD1-207ENST00000587476 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
TUBD1-207ENST00000587476 CERKQ8TCT0 537 aa8.68□□□□□ -1.02
TUBD1-207ENST00000587476 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
TUBD1-207ENST00000587476 ARID3AQ99856 593 aa8.68□□□□□ -1.02
TUBD1-207ENST00000587476 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
TUBD1-207ENST00000587476 A6NJR5 290 aa8.67□□□□□ -1.02
TUBD1-207ENST00000587476 OATP04181 439 aa8.67□□□□□ -1.02
TUBD1-207ENST00000587476 SKIV2LQ15477 1246 aaKnown RBP8.67□□□□□ -1.02
TUBD1-207ENST00000587476 APBB1O00213 710 aa8.66□□□□□ -1.02
TUBD1-207ENST00000587476 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
TUBD1-207ENST00000587476 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
TUBD1-207ENST00000587476 METTL3Q86U44 580 aaKnown RBP8.65□□□□□ -1.02
TUBD1-207ENST00000587476 PHOX2BQ99453 314 aa8.65□□□□□ -1.02
TUBD1-207ENST00000587476 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
TUBD1-207ENST00000587476 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
TUBD1-207ENST00000587476 MCM6Q14566 821 aa8.64□□□□□ -1.03
TUBD1-207ENST00000587476 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
TUBD1-207ENST00000587476 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
TUBD1-207ENST00000587476 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
TUBD1-207ENST00000587476 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
TUBD1-207ENST00000587476 POTEMA6NI47 508 aa8.62□□□□□ -1.03
TUBD1-207ENST00000587476 TRAK2O60296 914 aa8.62□□□□□ -1.03
TUBD1-207ENST00000587476 FOSBP53539 338 aa8.62□□□□□ -1.03
TUBD1-207ENST00000587476 PADI6Q6TGC4 694 aa8.62□□□□□ -1.03
TUBD1-207ENST00000587476 SNPHO15079 494 aa8.61□□□□□ -1.03
TUBD1-207ENST00000587476 ST18O60284 1047 aa8.61□□□□□ -1.03
TUBD1-207ENST00000587476 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
TUBD1-207ENST00000587476 POTEGQ6S5H5 508 aa8.61□□□□□ -1.03
TUBD1-207ENST00000587476 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
TUBD1-207ENST00000587476 ADGRG1Q9Y653 693 aa8.61□□□□□ -1.03
TUBD1-207ENST00000587476 KDM4FA0A1W2PPD8 638 aa8.6□□□□□ -1.03
TUBD1-207ENST00000587476 DIXDC1Q155Q3 683 aa8.6□□□□□ -1.03
TUBD1-207ENST00000587476 ZDHHC16Q969W1 377 aa8.6□□□□□ -1.03
TUBD1-207ENST00000587476 FAM161AQ3B820 660 aa8.59□□□□□ -1.03
TUBD1-207ENST00000587476 ZNF454Q8N9F8 522 aa8.59□□□□□ -1.03
TUBD1-207ENST00000587476 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
TUBD1-207ENST00000587476 RAD21O60216 631 aa8.58□□□□□ -1.04
TUBD1-207ENST00000587476 CLK2P49760 499 aaKnown RBP8.58□□□□□ -1.04
TUBD1-207ENST00000587476 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
TUBD1-207ENST00000587476 TTC13Q8NBP0 860 aa8.58□□□□□ -1.04
TUBD1-207ENST00000587476 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
TUBD1-207ENST00000587476 POLR3EQ9NVU0 708 aa8.58□□□□□ -1.04
TUBD1-207ENST00000587476 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
TUBD1-207ENST00000587476 PROCA1Q8NCQ7 364 aaPredicted RBP8.57□□□□□ -1.04
TUBD1-207ENST00000587476 NLRP7Q8WX94 980 aa8.57□□□□□ -1.04
TUBD1-207ENST00000587476 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
TUBD1-207ENST00000587476 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
TUBD1-207ENST00000587476 SPDYE5A6NIY4 337 aa8.55□□□□□ -1.04
TUBD1-207ENST00000587476 HOXB3P14651 431 aaPredicted RBP8.55□□□□□ -1.04
TUBD1-207ENST00000587476 PRSS12P56730 875 aa8.55□□□□□ -1.04
TUBD1-207ENST00000587476 DOK7Q18PE1 504 aa8.55□□□□□ -1.04
TUBD1-207ENST00000587476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
TUBD1-207ENST00000587476 BANK1Q8NDB2 785 aa8.54□□□□□ -1.04
TUBD1-207ENST00000587476 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
TUBD1-207ENST00000587476 RIMBP2O15034 1052 aa8.53□□□□□ -1.04
TUBD1-207ENST00000587476 MARVELD3Q96A59 401 aa8.53□□□□□ -1.04
TUBD1-207ENST00000587476 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
TUBD1-207ENST00000587476 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
TUBD1-207ENST00000587476 NUDT7P0C024 238 aa8.52□□□□□ -1.05
TUBD1-207ENST00000587476 ZSWIM6Q9HCJ5 1215 aa8.52□□□□□ -1.05
TUBD1-207ENST00000587476 RFC5P40937 340 aa8.51□□□□□ -1.05
TUBD1-207ENST00000587476 TRIM26Q12899 539 aaPredicted RBP8.51□□□□□ -1.05
TUBD1-207ENST00000587476 TMEM259Q4ZIN3 620 aa8.51□□□□□ -1.05
TUBD1-207ENST00000587476 ZNF710Q8N1W2 664 aa8.51□□□□□ -1.05
TUBD1-207ENST00000587476 SULF1Q8IWU6 871 aa8.5□□□□□ -1.05
TUBD1-207ENST00000587476 FNBP4Q8N3X1 1017 aaPredicted RBP8.5□□□□□ -1.05
TUBD1-207ENST00000587476 CCDC97Q96F63 343 aaPredicted RBP8.5□□□□□ -1.05
TUBD1-207ENST00000587476 POM121Q96HA1 1249 aa8.5□□□□□ -1.05
TUBD1-207ENST00000587476 ARSIQ5FYB1 569 aa8.49□□□□□ -1.05
TUBD1-207ENST00000587476 PPP2R2DQ66LE6 453 aa8.49□□□□□ -1.05
TUBD1-207ENST00000587476 SERPINA10Q9UK55 444 aa8.49□□□□□ -1.05
TUBD1-207ENST00000587476 ZNF777Q9ULD5 760 aaPredicted RBP8.49□□□□□ -1.05
TUBD1-207ENST00000587476 PSDA5PKW4 1024 aaPredicted RBP8.48□□□□□ -1.05
TUBD1-207ENST00000587476 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
TUBD1-207ENST00000587476 EMP3P54852 163 aa8.48□□□□□ -1.05
TUBD1-207ENST00000587476 TUSC1Q2TAM9 212 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms