RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 DUOX2Q9NRD8 1548 aa27.11■■□□□ 1.93
RETREG3-205ENST00000586870 PPP6R1Q9UPN7 881 aa27.11■■□□□ 1.93
RETREG3-205ENST00000586870 PTPRKQ15262 1439 aa27.11■■□□□ 1.93
RETREG3-205ENST00000586870 MADDQ8WXG6 1647 aa27.1■■□□□ 1.93
RETREG3-205ENST00000586870 PTPRMP28827 1452 aa27.08■■□□□ 1.93
RETREG3-205ENST00000586870 ADGRL2O95490 1459 aa27.07■■□□□ 1.92
RETREG3-205ENST00000586870 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
RETREG3-205ENST00000586870 ROCK1Q13464 1354 aa27.06■■□□□ 1.92
RETREG3-205ENST00000586870 ERBINQ96RT1 1412 aa27.05■■□□□ 1.92
RETREG3-205ENST00000586870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.05■■□□□ 1.92
RETREG3-205ENST00000586870 CNTLNQ9NXG0 1405 aa27.04■■□□□ 1.92
RETREG3-205ENST00000586870 CEBPAP49715 358 aaPredicted RBP27.04■■□□□ 1.92
RETREG3-205ENST00000586870 RIMS1Q86UR5 1692 aaKnown RBP27.03■■□□□ 1.92
RETREG3-205ENST00000586870 FER1L4A9Z1Z3 1794 aa27.01■■□□□ 1.91
RETREG3-205ENST00000586870 ANKRD50Q9ULJ7 1429 aa27.01■■□□□ 1.91
RETREG3-205ENST00000586870 HFM1A2PYH4 1435 aa27■■□□□ 1.91
RETREG3-205ENST00000586870 ZMYM3Q14202 1370 aa26.98■■□□□ 1.91
RETREG3-205ENST00000586870 KANK1Q14678 1352 aa26.96■■□□□ 1.91
RETREG3-205ENST00000586870 EIF2AK4Q9P2K8 1649 aaKnown RBP26.96■■□□□ 1.91
RETREG3-205ENST00000586870 NAIPQ13075 1403 aa26.92■■□□□ 1.9
RETREG3-205ENST00000586870 ZNF316A6NFI3 1004 aaPredicted RBP26.91■■□□□ 1.9
RETREG3-205ENST00000586870 KDM5DQ9BY66 1539 aa26.9■■□□□ 1.9
RETREG3-205ENST00000586870 CLTCQ00610 1675 aaKnown RBP26.88■■□□□ 1.89
RETREG3-205ENST00000586870 RNF17Q9BXT8 1623 aaKnown RBP26.87■■□□□ 1.89
RETREG3-205ENST00000586870 FAM135AQ9P2D6 1515 aa26.86■■□□□ 1.89
RETREG3-205ENST00000586870 GCC2Q8IWJ2 1684 aa26.85■■□□□ 1.89
RETREG3-205ENST00000586870 MROH2AA6NES4 1674 aa26.81■■□□□ 1.88
RETREG3-205ENST00000586870 ABCC3O15438 1527 aa26.81■■□□□ 1.88
RETREG3-205ENST00000586870 FBXO31Q5XUX0 539 aaPredicted RBP26.81■■□□□ 1.88
RETREG3-205ENST00000586870 PRDM15P57071 1507 aaPredicted RBP26.8■■□□□ 1.88
RETREG3-205ENST00000586870 C3P01024 1663 aa26.8■■□□□ 1.88
RETREG3-205ENST00000586870 MROH1Q8NDA8 1641 aa26.8■■□□□ 1.88
RETREG3-205ENST00000586870 NUP155O75694 1391 aa26.8■■□□□ 1.88
RETREG3-205ENST00000586870 TRIM52Q96A61 297 aa26.79■■□□□ 1.88
RETREG3-205ENST00000586870 NPATQ14207 1427 aa26.78■■□□□ 1.88
RETREG3-205ENST00000586870 ACIN1Q9UKV3 1341 aaKnown RBP26.77■■□□□ 1.88
RETREG3-205ENST00000586870 DEPDC5O75140 1603 aa26.76■■□□□ 1.87
RETREG3-205ENST00000586870 PZPP20742 1482 aa26.76■■□□□ 1.87
RETREG3-205ENST00000586870 ZC3H13Q5T200 1668 aaKnown RBP26.75■■□□□ 1.87
RETREG3-205ENST00000586870 TIMELESSQ9UNS1 1208 aa26.75■■□□□ 1.87
RETREG3-205ENST00000586870 UHRF1BP1Q6BDS2 1440 aa26.75■■□□□ 1.87
RETREG3-205ENST00000586870 DIEXFQ68CQ4 756 aaKnown RBP26.74■■□□□ 1.87
RETREG3-205ENST00000586870 TNRQ92752 1358 aa26.72■■□□□ 1.87
RETREG3-205ENST00000586870 CEP152O94986 1710 aa26.69■■□□□ 1.86
RETREG3-205ENST00000586870 HSPA2P54652 639 aa26.69■■□□□ 1.86
RETREG3-205ENST00000586870 LMTK2Q8IWU2 1503 aa26.69■■□□□ 1.86
RETREG3-205ENST00000586870 ARHGAP31Q2M1Z3 1444 aa26.69■■□□□ 1.86
RETREG3-205ENST00000586870 VWDEQ8N2E2 1590 aa26.68■■□□□ 1.86
RETREG3-205ENST00000586870 UNC13BO14795 1591 aa26.68■■□□□ 1.86
RETREG3-205ENST00000586870 CAMSAP1Q5T5Y3 1602 aa26.67■■□□□ 1.86
RETREG3-205ENST00000586870 LMTK3Q96Q04 1460 aa26.66■■□□□ 1.86
RETREG3-205ENST00000586870 SIN3AQ96ST3 1273 aa26.65■■□□□ 1.86
RETREG3-205ENST00000586870 SETD1BQ9UPS6 1966 aaKnown RBP26.64■■□□□ 1.85
RETREG3-205ENST00000586870 ERVK-7P63135 1459 aa26.63■■□□□ 1.85
RETREG3-205ENST00000586870 SLC4A1APQ9BWU0 796 aaKnown RBP26.62■■□□□ 1.85
RETREG3-205ENST00000586870 PREX1Q8TCU6 1659 aa26.62■■□□□ 1.85
RETREG3-205ENST00000586870 NEUROD1Q13562 356 aa26.61■■□□□ 1.85
RETREG3-205ENST00000586870 EFCAB6Q5THR3 1501 aa26.6■■□□□ 1.85
RETREG3-205ENST00000586870 STAG3Q9UJ98 1225 aa26.59■■□□□ 1.85
RETREG3-205ENST00000586870 IQGAP3Q86VI3 1631 aa26.58■■□□□ 1.84
RETREG3-205ENST00000586870 SPATA31D1Q6ZQQ2 1576 aa26.58■■□□□ 1.84
RETREG3-205ENST00000586870 RPRD2Q5VT52 1461 aaKnown RBP26.57■■□□□ 1.84
RETREG3-205ENST00000586870 TET3O43151 1660 aa26.56■■□□□ 1.84
RETREG3-205ENST00000586870 NLRP1Q9C000 1473 aa26.56■■□□□ 1.84
RETREG3-205ENST00000586870 PKD2Q13563 968 aa26.56■■□□□ 1.84
RETREG3-205ENST00000586870 THEMISQ8N1K5 641 aaPredicted RBP26.56■■□□□ 1.84
RETREG3-205ENST00000586870 A2ML1A8K2U0 1454 aa26.55■■□□□ 1.84
RETREG3-205ENST00000586870 SLC52A1Q9NWF4 448 aa26.54■■□□□ 1.84
RETREG3-205ENST00000586870 MYO3AQ8NEV4 1616 aa26.53■■□□□ 1.84
RETREG3-205ENST00000586870 IDI1Q13907 227 aa26.53■■□□□ 1.84
RETREG3-205ENST00000586870 MPHOSPH9Q99550 1183 aa26.52■■□□□ 1.84
RETREG3-205ENST00000586870 CEP170BQ9Y4F5 1589 aaPredicted RBP26.51■■□□□ 1.83
RETREG3-205ENST00000586870 NOS1P29475 1434 aa26.51■■□□□ 1.83
RETREG3-205ENST00000586870 CFAP65Q6ZU64 1925 aaKnown RBP26.5■■□□□ 1.83
RETREG3-205ENST00000586870 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
RETREG3-205ENST00000586870 CHGAP10645 457 aaKnown RBP26.48■■□□□ 1.83
RETREG3-205ENST00000586870 TONSLQ96HA7 1378 aa26.48■■□□□ 1.83
RETREG3-205ENST00000586870 UGGT1Q9NYU2 1555 aa26.47■■□□□ 1.83
RETREG3-205ENST00000586870 DMRT2Q9Y5R5 561 aa26.46■■□□□ 1.83
RETREG3-205ENST00000586870 E9PCH4 1651 aa26.45■■□□□ 1.82
RETREG3-205ENST00000586870 FOXD1Q16676 465 aa26.44■■□□□ 1.82
RETREG3-205ENST00000586870 ANKLE2Q86XL3 938 aa26.43■■□□□ 1.82
RETREG3-205ENST00000586870 NCKAP5LQ9HCH0 1330 aa26.43■■□□□ 1.82
RETREG3-205ENST00000586870 ZNF142P52746 1687 aaPredicted RBP26.42■■□□□ 1.82
RETREG3-205ENST00000586870 SYNMO15061 1565 aa26.41■■□□□ 1.82
RETREG3-205ENST00000586870 EID1Q9Y6B2 187 aa26.39■■□□□ 1.81
RETREG3-205ENST00000586870 PLA2R1Q13018 1463 aa26.38■■□□□ 1.81
RETREG3-205ENST00000586870 PTPRTO14522 1441 aa26.38■■□□□ 1.81
RETREG3-205ENST00000586870 TXNDC2Q86VQ3 553 aa26.36■■□□□ 1.81
RETREG3-205ENST00000586870 HDGFP51858 240 aaKnown RBP26.35■■□□□ 1.81
RETREG3-205ENST00000586870 PIK3C2BO00750 1634 aa26.34■■□□□ 1.81
RETREG3-205ENST00000586870 ANKRD30BQ9BXX2 1392 aa26.32■■□□□ 1.8
RETREG3-205ENST00000586870 ZNF326Q5BKZ1 582 aaKnown RBP26.32■■□□□ 1.8
RETREG3-205ENST00000586870 TMEM2Q9UHN6 1383 aa26.32■■□□□ 1.8
RETREG3-205ENST00000586870 UBR1Q8IWV7 1749 aa26.29■■□□□ 1.8
RETREG3-205ENST00000586870 ADGRB3O60242 1522 aa26.29■■□□□ 1.8
RETREG3-205ENST00000586870 BCANQ96GW7 911 aa26.28■■□□□ 1.8
RETREG3-205ENST00000586870 SPHKAPQ2M3C7 1700 aa26.28■■□□□ 1.8
RETREG3-205ENST00000586870 TRPM2O94759 1503 aa26.28■■□□□ 1.8
RETREG3-205ENST00000586870 LTKP29376 864 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms