RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 KDM5DQ9BY66 1539 aa37.11■■■■□ 3.53
ERCC2-209ENST00000586856 ZMYM3Q14202 1370 aa37.1■■■■□ 3.53
ERCC2-209ENST00000586856 SETD1BQ9UPS6 1966 aaKnown RBP37.09■■■■□ 3.53
ERCC2-209ENST00000586856 ERBINQ96RT1 1412 aa37.06■■■■□ 3.52
ERCC2-209ENST00000586856 ADGRL2O95490 1459 aa37.06■■■■□ 3.52
ERCC2-209ENST00000586856 ANKRD30AQ9BXX3 1397 aa37.05■■■■□ 3.52
ERCC2-209ENST00000586856 MROH1Q8NDA8 1641 aa37.05■■■■□ 3.52
ERCC2-209ENST00000586856 NPATQ14207 1427 aa37.04■■■■□ 3.52
ERCC2-209ENST00000586856 RRP7BPQ9NSQ0 103 aa37.04■■■■□ 3.52
ERCC2-209ENST00000586856 CHIC2Q9UKJ5 165 aa37.04■■■■□ 3.52
ERCC2-209ENST00000586856 UHRF1BP1Q6BDS2 1440 aa37.02■■■■□ 3.52
ERCC2-209ENST00000586856 ZC3H13Q5T200 1668 aaKnown RBP37.01■■■■□ 3.52
ERCC2-209ENST00000586856 NCOA1Q15788 1441 aa37.01■■■■□ 3.51
ERCC2-209ENST00000586856 PTPRKQ15262 1439 aa36.99■■■■□ 3.51
ERCC2-209ENST00000586856 HSPA2P54652 639 aa36.98■■■■□ 3.51
ERCC2-209ENST00000586856 ABCC3O15438 1527 aa36.97■■■■□ 3.51
ERCC2-209ENST00000586856 PRDM15P57071 1507 aaPredicted RBP36.95■■■■□ 3.51
ERCC2-209ENST00000586856 WASHC2CQ9Y4E1 1318 aa36.95■■■■□ 3.51
ERCC2-209ENST00000586856 DEPDC5O75140 1603 aa36.95■■■■□ 3.51
ERCC2-209ENST00000586856 MYO3AQ8NEV4 1616 aa36.94■■■■□ 3.5
ERCC2-209ENST00000586856 CEP152O94986 1710 aa36.93■■■■□ 3.5
ERCC2-209ENST00000586856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.93■■■■□ 3.5
ERCC2-209ENST00000586856 PZPP20742 1482 aa36.92■■■■□ 3.5
ERCC2-209ENST00000586856 RRBP1Q9P2E9 1410 aaKnown RBP36.88■■■■□ 3.49
ERCC2-209ENST00000586856 ZNF142P52746 1687 aaPredicted RBP36.87■■■■□ 3.49
ERCC2-209ENST00000586856 CAMSAP1Q5T5Y3 1602 aa36.87■■■■□ 3.49
ERCC2-209ENST00000586856 ROCK1Q13464 1354 aa36.82■■■■□ 3.49
ERCC2-209ENST00000586856 ANKRD50Q9ULJ7 1429 aa36.81■■■■□ 3.48
ERCC2-209ENST00000586856 CEP170BQ9Y4F5 1589 aaPredicted RBP36.81■■■■□ 3.48
ERCC2-209ENST00000586856 ITGAEP38570 1179 aa36.78■■■■□ 3.48
ERCC2-209ENST00000586856 TNRQ92752 1358 aa36.78■■■■□ 3.48
ERCC2-209ENST00000586856 FBXO31Q5XUX0 539 aaPredicted RBP36.77■■■■□ 3.48
ERCC2-209ENST00000586856 VWDEQ8N2E2 1590 aa36.77■■■■□ 3.48
ERCC2-209ENST00000586856 STRCQ7RTU9 1775 aa36.76■■■■□ 3.47
ERCC2-209ENST00000586856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.75■■■■□ 3.472e-8■■■□□ 14.9
ERCC2-209ENST00000586856 KANK1Q14678 1352 aa36.75■■■■□ 3.47
ERCC2-209ENST00000586856 SPATA31D1Q6ZQQ2 1576 aa36.73■■■■□ 3.47
ERCC2-209ENST00000586856 LMTK2Q8IWU2 1503 aa36.71■■■■□ 3.47
ERCC2-209ENST00000586856 A2ML1A8K2U0 1454 aa36.71■■■■□ 3.47
ERCC2-209ENST00000586856 ERVK-7P63135 1459 aa36.71■■■■□ 3.47
ERCC2-209ENST00000586856 UNC13BO14795 1591 aa36.69■■■■□ 3.46
ERCC2-209ENST00000586856 ARHGAP31Q2M1Z3 1444 aa36.68■■■■□ 3.46
ERCC2-209ENST00000586856 CFAP65Q6ZU64 1925 aaKnown RBP36.67■■■■□ 3.46
ERCC2-209ENST00000586856 NLRP1Q9C000 1473 aa36.64■■■■□ 3.46
ERCC2-209ENST00000586856 EFCAB6Q5THR3 1501 aa36.63■■■■□ 3.45
ERCC2-209ENST00000586856 PLA2R1Q13018 1463 aa36.6■■■■□ 3.45
ERCC2-209ENST00000586856 TET3O43151 1660 aa36.57■■■■□ 3.44
ERCC2-209ENST00000586856 GCC2Q8IWJ2 1684 aa36.56■■■■□ 3.44
ERCC2-209ENST00000586856 UGGT1Q9NYU2 1555 aa36.53■■■■□ 3.44
ERCC2-209ENST00000586856 IQGAP3Q86VI3 1631 aa36.52■■■■□ 3.44
ERCC2-209ENST00000586856 DMRT2Q9Y5R5 561 aa36.51■■■■□ 3.44
ERCC2-209ENST00000586856 PTPRTO14522 1441 aa36.51■■■■□ 3.43
ERCC2-209ENST00000586856 POLR1AO95602 1720 aaPredicted RBP36.48■■■■□ 3.43
ERCC2-209ENST00000586856 NAIPQ13075 1403 aa36.47■■■■□ 3.43
ERCC2-209ENST00000586856 SYNMO15061 1565 aa36.46■■■■□ 3.43
ERCC2-209ENST00000586856 RPRD2Q5VT52 1461 aaKnown RBP36.46■■■■□ 3.43
ERCC2-209ENST00000586856 UBR1Q8IWV7 1749 aa36.45■■■■□ 3.43
ERCC2-209ENST00000586856 NCKAP5LQ9HCH0 1330 aa36.45■■■■□ 3.43
ERCC2-209ENST00000586856 NOS1P29475 1434 aa36.42■■■■□ 3.42
ERCC2-209ENST00000586856 PKD2Q13563 968 aa36.42■■■■□ 3.42
ERCC2-209ENST00000586856 HFM1A2PYH4 1435 aa36.42■■■■□ 3.42
ERCC2-209ENST00000586856 PIK3C2BO00750 1634 aa36.41■■■■□ 3.42
ERCC2-209ENST00000586856 E9PCH4 1651 aa36.41■■■■□ 3.42
ERCC2-209ENST00000586856 NUP155O75694 1391 aa36.4■■■■□ 3.42
ERCC2-209ENST00000586856 NEURL4Q96JN8 1562 aa36.4■■■■□ 3.42
ERCC2-209ENST00000586856 THEMISQ8N1K5 641 aaPredicted RBP36.39■■■■□ 3.42
ERCC2-209ENST00000586856 ILDR1Q86SU0 546 aaPredicted RBP36.37■■■■□ 3.41
ERCC2-209ENST00000586856 KDM5AP29375 1690 aaKnown RBP36.33■■■■□ 3.41
ERCC2-209ENST00000586856 ADGRB3O60242 1522 aa36.28■■■■□ 3.4
ERCC2-209ENST00000586856 ANKLE2Q86XL3 938 aa36.27■■■■□ 3.4
ERCC2-209ENST00000586856 SLIT1O75093 1534 aa36.26■■■■□ 3.4
ERCC2-209ENST00000586856 ARHGAP23Q9P227 1491 aa36.25■■■■□ 3.39
ERCC2-209ENST00000586856 IDI1Q13907 227 aa36.25■■■■□ 3.39
ERCC2-209ENST00000586856 MED14O60244 1454 aa36.24■■■■□ 3.39
ERCC2-209ENST00000586856 IQGAP1P46940 1657 aa36.23■■■■□ 3.39
ERCC2-209ENST00000586856 LTBP4Q8N2S1 1624 aa36.22■■■■□ 3.39
ERCC2-209ENST00000586856 NPHP4O75161 1426 aaPredicted RBP36.21■■■■□ 3.39
ERCC2-209ENST00000586856 SLC52A1Q9NWF4 448 aa36.21■■■■□ 3.39
ERCC2-209ENST00000586856 STAG3Q9UJ98 1225 aa36.2■■■■□ 3.39
ERCC2-209ENST00000586856 SCAF11Q99590 1463 aaKnown RBP36.19■■■■□ 3.38
ERCC2-209ENST00000586856 SPHKAPQ2M3C7 1700 aa36.19■■■■□ 3.38
ERCC2-209ENST00000586856 MYO5BQ9ULV0 1848 aa36.18■■■■□ 3.38
ERCC2-209ENST00000586856 TMEM2Q9UHN6 1383 aa36.16■■■■□ 3.38
ERCC2-209ENST00000586856 CERKQ8TCT0 537 aa36.16■■■■□ 3.38
ERCC2-209ENST00000586856 ZNF335Q9H4Z2 1342 aaPredicted RBP36.14■■■■□ 3.38
ERCC2-209ENST00000586856 TMEM131LA2VDJ0 1609 aa36.14■■■■□ 3.38
ERCC2-209ENST00000586856 TRIM52Q96A61 297 aa36.12■■■■□ 3.37
ERCC2-209ENST00000586856 LTKP29376 864 aa36.09■■■■□ 3.37
ERCC2-209ENST00000586856 TXNDC2Q86VQ3 553 aa36.08■■■■□ 3.37
ERCC2-209ENST00000586856 FBXO41Q8TF61 875 aa36.07■■■■□ 3.36
ERCC2-209ENST00000586856 EID1Q9Y6B2 187 aa36.06■■■■□ 3.36
ERCC2-209ENST00000586856 TRPM2O94759 1503 aa36.04■■■■□ 3.36
ERCC2-209ENST00000586856 ZFYVE9O95405 1425 aa36■■■■□ 3.35
ERCC2-209ENST00000586856 SETD5Q9C0A6 1442 aa36■■■■□ 3.35
ERCC2-209ENST00000586856 CLTCL1P53675 1640 aa36■■■■□ 3.35
ERCC2-209ENST00000586856 IQSEC2Q5JU85 1478 aa35.99■■■■□ 3.35
ERCC2-209ENST00000586856 CHGAP10645 457 aaKnown RBP35.98■■■■□ 3.35
ERCC2-209ENST00000586856 SLC4A1APQ9BWU0 796 aaKnown RBP35.98■■■■□ 3.35
ERCC2-209ENST00000586856 RIMS2Q9UQ26 1411 aa35.97■■■■□ 3.35
ERCC2-209ENST00000586856 CPS1P31327 1500 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms