RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 FAM135AQ9P2D6 1515 aa21.35■■□□□ 1.01
TPM4-205ENST00000586833 RIMS1Q86UR5 1692 aaKnown RBP21.34■■□□□ 1.01
TPM4-205ENST00000586833 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1.01
TPM4-205ENST00000586833 KANK1Q14678 1352 aa21.33■■□□□ 1
TPM4-205ENST00000586833 ZMYM3Q14202 1370 aa21.32■■□□□ 1
TPM4-205ENST00000586833 EIF2AK4Q9P2K8 1649 aaKnown RBP21.32■■□□□ 1
TPM4-205ENST00000586833 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
TPM4-205ENST00000586833 CEBPAP49715 358 aaPredicted RBP21.29■■□□□ 1
TPM4-205ENST00000586833 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
TPM4-205ENST00000586833 PTPRKQ15262 1439 aa21.28■■□□□ 1
TPM4-205ENST00000586833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 19e-7■■□□□ 13.8
TPM4-205ENST00000586833 NPATQ14207 1427 aa21.25■□□□□ 0.99
TPM4-205ENST00000586833 RNF17Q9BXT8 1623 aaKnown RBP21.23■□□□□ 0.99
TPM4-205ENST00000586833 UHRF1BP1Q6BDS2 1440 aa21.22■□□□□ 0.99
TPM4-205ENST00000586833 MROH2AA6NES4 1674 aa21.22■□□□□ 0.99
TPM4-205ENST00000586833 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
TPM4-205ENST00000586833 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
TPM4-205ENST00000586833 PZPP20742 1482 aa21.18■□□□□ 0.98
TPM4-205ENST00000586833 ABCC3O15438 1527 aa21.18■□□□□ 0.98
TPM4-205ENST00000586833 ZC3H13Q5T200 1668 aaKnown RBP21.17■□□□□ 0.98
TPM4-205ENST00000586833 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
TPM4-205ENST00000586833 C3P01024 1663 aa21.15■□□□□ 0.98
TPM4-205ENST00000586833 TNRQ92752 1358 aa21.14■□□□□ 0.98
TPM4-205ENST00000586833 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
TPM4-205ENST00000586833 ARHGAP31Q2M1Z3 1444 aa21.12■□□□□ 0.97
TPM4-205ENST00000586833 DEPDC5O75140 1603 aa21.12■□□□□ 0.97
TPM4-205ENST00000586833 MROH1Q8NDA8 1641 aa21.12■□□□□ 0.97
TPM4-205ENST00000586833 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
TPM4-205ENST00000586833 LMTK3Q96Q04 1460 aa21.12■□□□□ 0.97
TPM4-205ENST00000586833 NAIPQ13075 1403 aa21.11■□□□□ 0.97
TPM4-205ENST00000586833 NUP155O75694 1391 aa21.1■□□□□ 0.97
TPM4-205ENST00000586833 FBXO31Q5XUX0 539 aaPredicted RBP21.1■□□□□ 0.97
TPM4-205ENST00000586833 PREX1Q8TCU6 1659 aa21.08■□□□□ 0.96
TPM4-205ENST00000586833 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
TPM4-205ENST00000586833 HSPA2P54652 639 aa21.06■□□□□ 0.96
TPM4-205ENST00000586833 TRIM52Q96A61 297 aa21.06■□□□□ 0.96
TPM4-205ENST00000586833 NLRP1Q9C000 1473 aa21.06■□□□□ 0.96
TPM4-205ENST00000586833 ERVK-7P63135 1459 aa21.05■□□□□ 0.96
TPM4-205ENST00000586833 UNC13BO14795 1591 aa21.05■□□□□ 0.96
TPM4-205ENST00000586833 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
TPM4-205ENST00000586833 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
TPM4-205ENST00000586833 DMRT2Q9Y5R5 561 aa21.03■□□□□ 0.96
TPM4-205ENST00000586833 SETD1BQ9UPS6 1966 aaKnown RBP21.03■□□□□ 0.96
TPM4-205ENST00000586833 SPATA31D1Q6ZQQ2 1576 aa21.02■□□□□ 0.96
TPM4-205ENST00000586833 A2ML1A8K2U0 1454 aa21.02■□□□□ 0.96
TPM4-205ENST00000586833 THEMISQ8N1K5 641 aaPredicted RBP21.02■□□□□ 0.96
TPM4-205ENST00000586833 EFCAB6Q5THR3 1501 aa21.01■□□□□ 0.95
TPM4-205ENST00000586833 SLC52A1Q9NWF4 448 aa21■□□□□ 0.95
TPM4-205ENST00000586833 STAG3Q9UJ98 1225 aa21■□□□□ 0.95
TPM4-205ENST00000586833 CEP152O94986 1710 aa21■□□□□ 0.95
TPM4-205ENST00000586833 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
TPM4-205ENST00000586833 CEP170BQ9Y4F5 1589 aaPredicted RBP20.98■□□□□ 0.95
TPM4-205ENST00000586833 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
TPM4-205ENST00000586833 MYO3AQ8NEV4 1616 aa20.98■□□□□ 0.95
TPM4-205ENST00000586833 PKD2Q13563 968 aa20.96■□□□□ 0.95
TPM4-205ENST00000586833 IQGAP3Q86VI3 1631 aa20.96■□□□□ 0.95
TPM4-205ENST00000586833 TET3O43151 1660 aa20.96■□□□□ 0.95
TPM4-205ENST00000586833 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
TPM4-205ENST00000586833 NOS1P29475 1434 aa20.95■□□□□ 0.94
TPM4-205ENST00000586833 PLA2R1Q13018 1463 aa20.94■□□□□ 0.94
TPM4-205ENST00000586833 UGGT1Q9NYU2 1555 aa20.93■□□□□ 0.94
TPM4-205ENST00000586833 ANKLE2Q86XL3 938 aa20.92■□□□□ 0.94
TPM4-205ENST00000586833 ZNF142P52746 1687 aaPredicted RBP20.92■□□□□ 0.94
TPM4-205ENST00000586833 HRCP23327 699 aa20.9■□□□□ 0.94
TPM4-205ENST00000586833 IDI1Q13907 227 aa20.9■□□□□ 0.94
TPM4-205ENST00000586833 HDGFP51858 240 aaKnown RBP20.88■□□□□ 0.93
TPM4-205ENST00000586833 EID1Q9Y6B2 187 aa20.88■□□□□ 0.93
TPM4-205ENST00000586833 RAB3GAP2Q9H2M9 1393 aa20.87■□□□□ 0.93
TPM4-205ENST00000586833 PTPRTO14522 1441 aa20.87■□□□□ 0.93
TPM4-205ENST00000586833 NCKAP5LQ9HCH0 1330 aa20.85■□□□□ 0.93
TPM4-205ENST00000586833 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
TPM4-205ENST00000586833 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
TPM4-205ENST00000586833 TRIM26Q12899 539 aaPredicted RBP20.83■□□□□ 0.93
TPM4-205ENST00000586833 SYNMO15061 1565 aa20.81■□□□□ 0.92
TPM4-205ENST00000586833 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
TPM4-205ENST00000586833 TMEM2Q9UHN6 1383 aa20.81■□□□□ 0.92
TPM4-205ENST00000586833 E9PCH4 1651 aa20.8■□□□□ 0.92
TPM4-205ENST00000586833 ADGRB3O60242 1522 aa20.79■□□□□ 0.92
TPM4-205ENST00000586833 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.79■□□□□ 0.92
TPM4-205ENST00000586833 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
TPM4-205ENST00000586833 SCAF11Q99590 1463 aaKnown RBP20.76■□□□□ 0.91
TPM4-205ENST00000586833 PIK3C2BO00750 1634 aa20.76■□□□□ 0.91
TPM4-205ENST00000586833 SLIT1O75093 1534 aa20.76■□□□□ 0.91
TPM4-205ENST00000586833 NPHP4O75161 1426 aaPredicted RBP20.76■□□□□ 0.91
TPM4-205ENST00000586833 TRPM2O94759 1503 aa20.75■□□□□ 0.91
TPM4-205ENST00000586833 KDM5AP29375 1690 aaKnown RBP20.75■□□□□ 0.91
TPM4-205ENST00000586833 ARHGAP23Q9P227 1491 aa20.75■□□□□ 0.91
TPM4-205ENST00000586833 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
TPM4-205ENST00000586833 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
TPM4-205ENST00000586833 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
TPM4-205ENST00000586833 BCANQ96GW7 911 aa20.73■□□□□ 0.91
TPM4-205ENST00000586833 MED14O60244 1454 aa20.73■□□□□ 0.91
TPM4-205ENST00000586833 CFAP65Q6ZU64 1925 aaKnown RBP20.71■□□□□ 0.91
TPM4-205ENST00000586833 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
TPM4-205ENST00000586833 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
TPM4-205ENST00000586833 LTKP29376 864 aa20.7■□□□□ 0.9
TPM4-205ENST00000586833 FOXD1Q16676 465 aa20.7■□□□□ 0.9
TPM4-205ENST00000586833 SPHKAPQ2M3C7 1700 aa20.7■□□□□ 0.9
TPM4-205ENST00000586833 RPGRIP1LQ68CZ1 1315 aa20.66■□□□□ 0.9
TPM4-205ENST00000586833 TMEM131LA2VDJ0 1609 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms