RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 CEBPAP49715 358 aaPredicted RBP32.5■■■□□ 2.79
RETREG3-204ENST00000586796 EIF2AK4Q9P2K8 1649 aaKnown RBP32.48■■■□□ 2.79
RETREG3-204ENST00000586796 PPP6R1Q9UPN7 881 aa32.47■■■□□ 2.79
RETREG3-204ENST00000586796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.46■■■□□ 2.79
RETREG3-204ENST00000586796 CNTLNQ9NXG0 1405 aa32.45■■■□□ 2.79
RETREG3-204ENST00000586796 ANKRD50Q9ULJ7 1429 aa32.45■■■□□ 2.79
RETREG3-204ENST00000586796 WASHC2CQ9Y4E1 1318 aa32.45■■■□□ 2.78
RETREG3-204ENST00000586796 CLTCQ00610 1675 aaKnown RBP32.43■■■□□ 2.78
RETREG3-204ENST00000586796 RNF17Q9BXT8 1623 aaKnown RBP32.42■■■□□ 2.78
RETREG3-204ENST00000586796 ZMYM3Q14202 1370 aa32.4■■■□□ 2.78
RETREG3-204ENST00000586796 KDM5DQ9BY66 1539 aa32.37■■■□□ 2.77
RETREG3-204ENST00000586796 MROH1Q8NDA8 1641 aa32.36■■■□□ 2.77
RETREG3-204ENST00000586796 C3P01024 1663 aa32.35■■■□□ 2.77
RETREG3-204ENST00000586796 MROH2AA6NES4 1674 aa32.33■■■□□ 2.77
RETREG3-204ENST00000586796 KANK1Q14678 1352 aa32.32■■■□□ 2.77
RETREG3-204ENST00000586796 PRDM15P57071 1507 aaPredicted RBP32.31■■■□□ 2.76
RETREG3-204ENST00000586796 ABCC3O15438 1527 aa32.3■■■□□ 2.76
RETREG3-204ENST00000586796 FAM135AQ9P2D6 1515 aa32.3■■■□□ 2.76
RETREG3-204ENST00000586796 DEPDC5O75140 1603 aa32.29■■■□□ 2.76
RETREG3-204ENST00000586796 NAIPQ13075 1403 aa32.29■■■□□ 2.76
RETREG3-204ENST00000586796 CEP152O94986 1710 aa32.26■■■□□ 2.76
RETREG3-204ENST00000586796 HFM1A2PYH4 1435 aa32.25■■■□□ 2.75
RETREG3-204ENST00000586796 ZC3H13Q5T200 1668 aaKnown RBP32.24■■■□□ 2.75
RETREG3-204ENST00000586796 FBXO31Q5XUX0 539 aaPredicted RBP32.23■■■□□ 2.75
RETREG3-204ENST00000586796 GCC2Q8IWJ2 1684 aa32.21■■■□□ 2.75
RETREG3-204ENST00000586796 PZPP20742 1482 aa32.19■■■□□ 2.74
RETREG3-204ENST00000586796 CAMSAP1Q5T5Y3 1602 aa32.18■■■□□ 2.74
RETREG3-204ENST00000586796 UNC13BO14795 1591 aa32.18■■■□□ 2.74
RETREG3-204ENST00000586796 VWDEQ8N2E2 1590 aa32.18■■■□□ 2.74
RETREG3-204ENST00000586796 NUP155O75694 1391 aa32.18■■■□□ 2.74
RETREG3-204ENST00000586796 NPATQ14207 1427 aa32.17■■■□□ 2.74
RETREG3-204ENST00000586796 LMTK2Q8IWU2 1503 aa32.13■■■□□ 2.73
RETREG3-204ENST00000586796 TRIM52Q96A61 297 aa32.13■■■□□ 2.73
RETREG3-204ENST00000586796 UHRF1BP1Q6BDS2 1440 aa32.12■■■□□ 2.73
RETREG3-204ENST00000586796 LMTK3Q96Q04 1460 aa32.11■■■□□ 2.73
RETREG3-204ENST00000586796 TNRQ92752 1358 aa32.1■■■□□ 2.73
RETREG3-204ENST00000586796 PREX1Q8TCU6 1659 aa32.1■■■□□ 2.73
RETREG3-204ENST00000586796 HSPA2P54652 639 aa32.09■■■□□ 2.73
RETREG3-204ENST00000586796 ARHGAP31Q2M1Z3 1444 aa32.09■■■□□ 2.73
RETREG3-204ENST00000586796 SETD5Q9C0A6 1442 aa32.07■■■□□ 2.72
RETREG3-204ENST00000586796 SETD1BQ9UPS6 1966 aaKnown RBP32.07■■■□□ 2.72
RETREG3-204ENST00000586796 EFCAB6Q5THR3 1501 aa32.05■■■□□ 2.72
RETREG3-204ENST00000586796 ERVK-7P63135 1459 aa32.05■■■□□ 2.72
RETREG3-204ENST00000586796 IQGAP3Q86VI3 1631 aa32.05■■■□□ 2.72
RETREG3-204ENST00000586796 CFAP65Q6ZU64 1925 aaKnown RBP32.04■■■□□ 2.72
RETREG3-204ENST00000586796 TET3O43151 1660 aa32.02■■■□□ 2.72
RETREG3-204ENST00000586796 MYO3AQ8NEV4 1616 aa32.01■■■□□ 2.72
RETREG3-204ENST00000586796 SPATA31D1Q6ZQQ2 1576 aa32.01■■■□□ 2.71
RETREG3-204ENST00000586796 RAB3GAP2Q9H2M9 1393 aa31.97■■■□□ 2.71
RETREG3-204ENST00000586796 CEP170BQ9Y4F5 1589 aaPredicted RBP31.94■■■□□ 2.7
RETREG3-204ENST00000586796 SLC4A1APQ9BWU0 796 aaKnown RBP31.94■■■□□ 2.7
RETREG3-204ENST00000586796 RPRD2Q5VT52 1461 aaKnown RBP31.94■■■□□ 2.7
RETREG3-204ENST00000586796 E9PCH4 1651 aa31.93■■■□□ 2.7
RETREG3-204ENST00000586796 A2ML1A8K2U0 1454 aa31.92■■■□□ 2.7
RETREG3-204ENST00000586796 NLRP1Q9C000 1473 aa31.91■■■□□ 2.7
RETREG3-204ENST00000586796 TRIM26Q12899 539 aaPredicted RBP31.91■■■□□ 2.7
RETREG3-204ENST00000586796 NOS1P29475 1434 aa31.9■■■□□ 2.7
RETREG3-204ENST00000586796 ZNF142P52746 1687 aaPredicted RBP31.89■■■□□ 2.7
RETREG3-204ENST00000586796 PKD2Q13563 968 aa31.88■■■□□ 2.69
RETREG3-204ENST00000586796 SYNMO15061 1565 aa31.86■■■□□ 2.69
RETREG3-204ENST00000586796 IDI1Q13907 227 aa31.85■■■□□ 2.69
RETREG3-204ENST00000586796 MPHOSPH9Q99550 1183 aa31.84■■■□□ 2.69
RETREG3-204ENST00000586796 STAG3Q9UJ98 1225 aa31.84■■■□□ 2.69
RETREG3-204ENST00000586796 UGGT1Q9NYU2 1555 aa31.84■■■□□ 2.69
RETREG3-204ENST00000586796 ACIN1Q9UKV3 1341 aaKnown RBP31.83■■■□□ 2.69
RETREG3-204ENST00000586796 FOXD1Q16676 465 aa31.81■■■□□ 2.68
RETREG3-204ENST00000586796 THEMISQ8N1K5 641 aaPredicted RBP31.81■■■□□ 2.68
RETREG3-204ENST00000586796 SLC52A1Q9NWF4 448 aa31.81■■■□□ 2.68
RETREG3-204ENST00000586796 PIK3C2BO00750 1634 aa31.78■■■□□ 2.68
RETREG3-204ENST00000586796 NCKAP5LQ9HCH0 1330 aa31.76■■■□□ 2.68
RETREG3-204ENST00000586796 CHGAP10645 457 aaKnown RBP31.76■■■□□ 2.67
RETREG3-204ENST00000586796 HRCP23327 699 aa31.76■■■□□ 2.67
RETREG3-204ENST00000586796 SPHKAPQ2M3C7 1700 aa31.73■■■□□ 2.67
RETREG3-204ENST00000586796 UBR1Q8IWV7 1749 aa31.73■■■□□ 2.67
RETREG3-204ENST00000586796 PTPRTO14522 1441 aa31.73■■■□□ 2.67
RETREG3-204ENST00000586796 PLA2R1Q13018 1463 aa31.71■■■□□ 2.67
RETREG3-204ENST00000586796 STRCQ7RTU9 1775 aa31.71■■■□□ 2.67
RETREG3-204ENST00000586796 ANKLE2Q86XL3 938 aa31.68■■■□□ 2.66
RETREG3-204ENST00000586796 ADGRB3O60242 1522 aa31.67■■■□□ 2.66
RETREG3-204ENST00000586796 TRPM2O94759 1503 aa31.65■■■□□ 2.66
RETREG3-204ENST00000586796 DMRT2Q9Y5R5 561 aa31.65■■■□□ 2.66
RETREG3-204ENST00000586796 CLTCL1P53675 1640 aa31.61■■■□□ 2.65
RETREG3-204ENST00000586796 TMEM2Q9UHN6 1383 aa31.61■■■□□ 2.65
RETREG3-204ENST00000586796 TXNDC2Q86VQ3 553 aa31.61■■■□□ 2.65
RETREG3-204ENST00000586796 EID1Q9Y6B2 187 aa31.6■■■□□ 2.65
RETREG3-204ENST00000586796 KDM5AP29375 1690 aaKnown RBP31.6■■■□□ 2.65
RETREG3-204ENST00000586796 TMEM131LA2VDJ0 1609 aa31.6■■■□□ 2.65
RETREG3-204ENST00000586796 LTKP29376 864 aa31.59■■■□□ 2.65
RETREG3-204ENST00000586796 ARHGAP23Q9P227 1491 aa31.58■■■□□ 2.65
RETREG3-204ENST00000586796 SLIT1O75093 1534 aa31.57■■■□□ 2.64
RETREG3-204ENST00000586796 MYO5BQ9ULV0 1848 aa31.56■■■□□ 2.64
RETREG3-204ENST00000586796 ZNF326Q5BKZ1 582 aaKnown RBP31.56■■■□□ 2.64
RETREG3-204ENST00000586796 POLR1AO95602 1720 aaPredicted RBP31.55■■■□□ 2.64
RETREG3-204ENST00000586796 PCGF6Q9BYE7 350 aa31.55■■■□□ 2.64
RETREG3-204ENST00000586796 SCAF11Q99590 1463 aaKnown RBP31.54■■■□□ 2.64
RETREG3-204ENST00000586796 CCDC144AA2RUR9 1427 aa31.54■■■□□ 2.64
RETREG3-204ENST00000586796 NEURL4Q96JN8 1562 aa31.53■■■□□ 2.64
RETREG3-204ENST00000586796 NUTM2DQ5VT03 806 aaPredicted RBP31.53■■■□□ 2.64
RETREG3-204ENST00000586796 SENP3Q9H4L4 574 aaPredicted RBP31.53■■■□□ 2.64
RETREG3-204ENST00000586796 NPHP4O75161 1426 aaPredicted RBP31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms