RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 MROH1Q8NDA8 1641 aa25.38■■□□□ 1.65
PRKCSH-203ENST00000586486 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
PRKCSH-203ENST00000586486 KIF3BO15066 747 aa25.36■■□□□ 1.65
PRKCSH-203ENST00000586486 HRCP23327 699 aa25.35■■□□□ 1.65
PRKCSH-203ENST00000586486 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
PRKCSH-203ENST00000586486 KDM5DQ9BY66 1539 aa25.33■■□□□ 1.65
PRKCSH-203ENST00000586486 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
PRKCSH-203ENST00000586486 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
PRKCSH-203ENST00000586486 ARID4BQ4LE39 1312 aaPredicted RBP25.3■■□□□ 1.64
PRKCSH-203ENST00000586486 IQGAP3Q86VI3 1631 aa25.3■■□□□ 1.64
PRKCSH-203ENST00000586486 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
PRKCSH-203ENST00000586486 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
PRKCSH-203ENST00000586486 GGT6Q6P531 493 aa25.25■■□□□ 1.63
PRKCSH-203ENST00000586486 KANK1Q14678 1352 aa25.25■■□□□ 1.63
PRKCSH-203ENST00000586486 LMTK2Q8IWU2 1503 aa25.24■■□□□ 1.63
PRKCSH-203ENST00000586486 ABCC3O15438 1527 aa25.24■■□□□ 1.63
PRKCSH-203ENST00000586486 NUP155O75694 1391 aa25.23■■□□□ 1.63
PRKCSH-203ENST00000586486 ADAMTSL3P82987 1691 aa25.23■■□□□ 1.63
PRKCSH-203ENST00000586486 CEP152O94986 1710 aa25.23■■□□□ 1.63
PRKCSH-203ENST00000586486 FER1L4A9Z1Z3 1794 aa25.22■■□□□ 1.63
PRKCSH-203ENST00000586486 PZPP20742 1482 aa25.21■■□□□ 1.63
PRKCSH-203ENST00000586486 TET3O43151 1660 aa25.2■■□□□ 1.63
PRKCSH-203ENST00000586486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.2■■□□□ 1.621e-7■■□□□ 12.6
PRKCSH-203ENST00000586486 MLECQ14165 292 aa25.19■■□□□ 1.62
PRKCSH-203ENST00000586486 CLTCQ00610 1675 aaKnown RBP25.19■■□□□ 1.62
PRKCSH-203ENST00000586486 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
PRKCSH-203ENST00000586486 MROH2AA6NES4 1674 aa25.19■■□□□ 1.62
PRKCSH-203ENST00000586486 CAMSAP1Q5T5Y3 1602 aa25.19■■□□□ 1.62
PRKCSH-203ENST00000586486 CNTLNQ9NXG0 1405 aa25.17■■□□□ 1.62
PRKCSH-203ENST00000586486 MADDQ8WXG6 1647 aa25.17■■□□□ 1.62
PRKCSH-203ENST00000586486 EFCAB6Q5THR3 1501 aa25.16■■□□□ 1.62
PRKCSH-203ENST00000586486 WASHC2CQ9Y4E1 1318 aa25.16■■□□□ 1.62
PRKCSH-203ENST00000586486 ARHGAP31Q2M1Z3 1444 aa25.11■■□□□ 1.61
PRKCSH-203ENST00000586486 E9PCH4 1651 aa25.11■■□□□ 1.61
PRKCSH-203ENST00000586486 RIMS1Q86UR5 1692 aaKnown RBP25.1■■□□□ 1.61
PRKCSH-203ENST00000586486 RPRD2Q5VT52 1461 aaKnown RBP25.09■■□□□ 1.61
PRKCSH-203ENST00000586486 MPHOSPH9Q99550 1183 aa25.09■■□□□ 1.61
PRKCSH-203ENST00000586486 SLC4A1APQ9BWU0 796 aaKnown RBP25.09■■□□□ 1.61
PRKCSH-203ENST00000586486 ESF1Q9H501 851 aaKnown RBP25.09■■□□□ 1.61
PRKCSH-203ENST00000586486 DHX57Q6P158 1386 aaKnown RBP25.06■■□□□ 1.6
PRKCSH-203ENST00000586486 NPATQ14207 1427 aa25.06■■□□□ 1.6
PRKCSH-203ENST00000586486 C3P01024 1663 aa25.05■■□□□ 1.6
PRKCSH-203ENST00000586486 ZMYM3Q14202 1370 aa25.04■■□□□ 1.6
PRKCSH-203ENST00000586486 PKD2Q13563 968 aa25.02■■□□□ 1.6
PRKCSH-203ENST00000586486 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
PRKCSH-203ENST00000586486 SPHKAPQ2M3C7 1700 aa25.01■■□□□ 1.59
PRKCSH-203ENST00000586486 SPATA31D1Q6ZQQ2 1576 aa24.99■■□□□ 1.59
PRKCSH-203ENST00000586486 PTPRMP28827 1452 aa24.98■■□□□ 1.59
PRKCSH-203ENST00000586486 ERVK-7P63135 1459 aa24.98■■□□□ 1.59
PRKCSH-203ENST00000586486 PTPRTO14522 1441 aa24.97■■□□□ 1.59
PRKCSH-203ENST00000586486 NOS1P29475 1434 aa24.96■■□□□ 1.59
PRKCSH-203ENST00000586486 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
PRKCSH-203ENST00000586486 TRPM2O94759 1503 aa24.95■■□□□ 1.59
PRKCSH-203ENST00000586486 CFAP65Q6ZU64 1925 aaKnown RBP24.94■■□□□ 1.58
PRKCSH-203ENST00000586486 SYNMO15061 1565 aa24.93■■□□□ 1.58
PRKCSH-203ENST00000586486 PLA2R1Q13018 1463 aa24.92■■□□□ 1.58
PRKCSH-203ENST00000586486 FOXD1Q16676 465 aa24.92■■□□□ 1.58
PRKCSH-203ENST00000586486 ANKRD30BQ9BXX2 1392 aa24.91■■□□□ 1.58
PRKCSH-203ENST00000586486 PIK3C2BO00750 1634 aa24.9■■□□□ 1.58
PRKCSH-203ENST00000586486 CEBPAP49715 358 aaPredicted RBP24.89■■□□□ 1.57
PRKCSH-203ENST00000586486 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
PRKCSH-203ENST00000586486 CLSPNQ9HAW4 1339 aa24.86■■□□□ 1.57
PRKCSH-203ENST00000586486 TNRQ92752 1358 aa24.86■■□□□ 1.57
PRKCSH-203ENST00000586486 CLTCL1P53675 1640 aa24.86■■□□□ 1.57
PRKCSH-203ENST00000586486 UGGT1Q9NYU2 1555 aa24.83■■□□□ 1.57
PRKCSH-203ENST00000586486 MYO3AQ8NEV4 1616 aa24.83■■□□□ 1.57
PRKCSH-203ENST00000586486 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
PRKCSH-203ENST00000586486 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.56
PRKCSH-203ENST00000586486 SETD1BQ9UPS6 1966 aaKnown RBP24.82■■□□□ 1.56
PRKCSH-203ENST00000586486 NLRP1Q9C000 1473 aa24.82■■□□□ 1.56
PRKCSH-203ENST00000586486 SLC52A1Q9NWF4 448 aa24.81■■□□□ 1.56
PRKCSH-203ENST00000586486 KDM5AP29375 1690 aaKnown RBP24.79■■□□□ 1.56
PRKCSH-203ENST00000586486 ZNF142P52746 1687 aaPredicted RBP24.79■■□□□ 1.56
PRKCSH-203ENST00000586486 PLPPR3Q6T4P5 718 aa24.78■■□□□ 1.56
PRKCSH-203ENST00000586486 KIF1BO60333 1816 aa24.78■■□□□ 1.56
PRKCSH-203ENST00000586486 NEURL4Q96JN8 1562 aa24.77■■□□□ 1.56
PRKCSH-203ENST00000586486 ADGRB3O60242 1522 aa24.75■■□□□ 1.55
PRKCSH-203ENST00000586486 CEP170BQ9Y4F5 1589 aaPredicted RBP24.74■■□□□ 1.55
PRKCSH-203ENST00000586486 IDI1Q13907 227 aa24.74■■□□□ 1.55
PRKCSH-203ENST00000586486 TMEM131LA2VDJ0 1609 aa24.74■■□□□ 1.55
PRKCSH-203ENST00000586486 A2ML1A8K2U0 1454 aa24.73■■□□□ 1.55
PRKCSH-203ENST00000586486 UBR1Q8IWV7 1749 aa24.72■■□□□ 1.55
PRKCSH-203ENST00000586486 UHRF1BP1Q6BDS2 1440 aa24.71■■□□□ 1.55
PRKCSH-203ENST00000586486 SPATA31E1Q6ZUB1 1445 aa24.7■■□□□ 1.55
PRKCSH-203ENST00000586486 MYO5BQ9ULV0 1848 aa24.69■■□□□ 1.54
PRKCSH-203ENST00000586486 SIN3AQ96ST3 1273 aa24.68■■□□□ 1.54
PRKCSH-203ENST00000586486 IFT172Q9UG01 1749 aa24.62■■□□□ 1.53
PRKCSH-203ENST00000586486 NEUROD1Q13562 356 aa24.61■■□□□ 1.53
PRKCSH-203ENST00000586486 LMTK3Q96Q04 1460 aa24.61■■□□□ 1.53
PRKCSH-203ENST00000586486 STAG3Q9UJ98 1225 aa24.61■■□□□ 1.53
PRKCSH-203ENST00000586486 CHGAP10645 457 aaKnown RBP24.6■■□□□ 1.53
PRKCSH-203ENST00000586486 SLIT1O75093 1534 aa24.59■■□□□ 1.53
PRKCSH-203ENST00000586486 PPLO60437 1756 aa24.59■■□□□ 1.53
PRKCSH-203ENST00000586486 NEXMIFQ5QGS0 1516 aa24.59■■□□□ 1.53
PRKCSH-203ENST00000586486 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.53
PRKCSH-203ENST00000586486 THEMISQ8N1K5 641 aaPredicted RBP24.57■■□□□ 1.52
PRKCSH-203ENST00000586486 TONSLQ96HA7 1378 aa24.56■■□□□ 1.52
PRKCSH-203ENST00000586486 TMEM2Q9UHN6 1383 aa24.56■■□□□ 1.52
PRKCSH-203ENST00000586486 ZFYVE9O95405 1425 aa24.56■■□□□ 1.52
PRKCSH-203ENST00000586486 RPGRIP1LQ68CZ1 1315 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms