RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 SHANK2Q9UPX8 1470 aa33.69■■■□□ 2.98
CIRBP-205ENST00000585913 MYO3AQ8NEV4 1616 aa33.68■■■□□ 2.98
CIRBP-205ENST00000585913 EIF2AK4Q9P2K8 1649 aaKnown RBP33.68■■■□□ 2.98
CIRBP-205ENST00000585913 ABCC5O15440 1437 aa33.68■■■□□ 2.98
CIRBP-205ENST00000585913 DNMT1P26358 1616 aaKnown RBP33.67■■■□□ 2.98
CIRBP-205ENST00000585913 RNF17Q9BXT8 1623 aaKnown RBP33.66■■■□□ 2.98
CIRBP-205ENST00000585913 WASHC2CQ9Y4E1 1318 aa33.66■■■□□ 2.98
CIRBP-205ENST00000585913 DAPK1P53355 1430 aa33.65■■■□□ 2.98
CIRBP-205ENST00000585913 DMRT2Q9Y5R5 561 aa33.65■■■□□ 2.98
CIRBP-205ENST00000585913 DUOX2Q9NRD8 1548 aa33.64■■■□□ 2.98
CIRBP-205ENST00000585913 CERKQ8TCT0 537 aa33.64■■■□□ 2.98
CIRBP-205ENST00000585913 ZNF142P52746 1687 aaPredicted RBP33.64■■■□□ 2.98
CIRBP-205ENST00000585913 KIF15Q9NS87 1388 aa33.6■■■□□ 2.97
CIRBP-205ENST00000585913 CEP170BQ9Y4F5 1589 aaPredicted RBP33.6■■■□□ 2.97
CIRBP-205ENST00000585913 PZPP20742 1482 aa33.6■■■□□ 2.97
CIRBP-205ENST00000585913 CAMSAP1Q5T5Y3 1602 aa33.59■■■□□ 2.97
CIRBP-205ENST00000585913 NCOA1Q15788 1441 aa33.58■■■□□ 2.97
CIRBP-205ENST00000585913 ZC3H13Q5T200 1668 aaKnown RBP33.58■■■□□ 2.97
CIRBP-205ENST00000585913 RRP7BPQ9NSQ0 103 aa33.55■■■□□ 2.96
CIRBP-205ENST00000585913 PTPRTO14522 1441 aa33.53■■■□□ 2.96
CIRBP-205ENST00000585913 ERBINQ96RT1 1412 aa33.53■■■□□ 2.96
CIRBP-205ENST00000585913 ABCC3O15438 1527 aa33.53■■■□□ 2.96
CIRBP-205ENST00000585913 MROH1Q8NDA8 1641 aa33.53■■■□□ 2.96
CIRBP-205ENST00000585913 TNRQ92752 1358 aa33.53■■■□□ 2.96
CIRBP-205ENST00000585913 FBXO31Q5XUX0 539 aaPredicted RBP33.52■■■□□ 2.96
CIRBP-205ENST00000585913 FAM50AQ14320 339 aaKnown RBP33.51■■■□□ 2.95
CIRBP-205ENST00000585913 A2ML1A8K2U0 1454 aa33.5■■■□□ 2.95
CIRBP-205ENST00000585913 ANKRD30AQ9BXX3 1397 aa33.5■■■□□ 2.95
CIRBP-205ENST00000585913 CHIC2Q9UKJ5 165 aa33.49■■■□□ 2.95
CIRBP-205ENST00000585913 PLA2R1Q13018 1463 aa33.48■■■□□ 2.95
CIRBP-205ENST00000585913 CEP152O94986 1710 aa33.48■■■□□ 2.95
CIRBP-205ENST00000585913 PRDM15P57071 1507 aaPredicted RBP33.44■■■□□ 2.94
CIRBP-205ENST00000585913 NCKAP5LQ9HCH0 1330 aa33.42■■■□□ 2.94
CIRBP-205ENST00000585913 ADGRL2O95490 1459 aa33.41■■■□□ 2.94
CIRBP-205ENST00000585913 DEPDC5O75140 1603 aa33.4■■■□□ 2.94
CIRBP-205ENST00000585913 PKD2Q13563 968 aa33.4■■■□□ 2.94
CIRBP-205ENST00000585913 NLRP1Q9C000 1473 aa33.39■■■□□ 2.94
CIRBP-205ENST00000585913 SPATA31D1Q6ZQQ2 1576 aa33.38■■■□□ 2.93
CIRBP-205ENST00000585913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.36■■■□□ 2.931e-19■□□□□ 10
CIRBP-205ENST00000585913 ERVK-7P63135 1459 aa33.36■■■□□ 2.93
CIRBP-205ENST00000585913 KANK1Q14678 1352 aa33.35■■■□□ 2.93
CIRBP-205ENST00000585913 UGGT1Q9NYU2 1555 aa33.32■■■□□ 2.92
CIRBP-205ENST00000585913 PPARGC1BQ86YN6 1023 aaKnown RBP33.31■■■□□ 2.92
CIRBP-205ENST00000585913 POLR1AO95602 1720 aaPredicted RBP33.31■■■□□ 2.92
CIRBP-205ENST00000585913 CFAP65Q6ZU64 1925 aaKnown RBP33.3■■■□□ 2.92
CIRBP-205ENST00000585913 ARHGAP31Q2M1Z3 1444 aa33.29■■■□□ 2.92
CIRBP-205ENST00000585913 THEMISQ8N1K5 641 aaPredicted RBP33.28■■■□□ 2.92
CIRBP-205ENST00000585913 LTBP4Q8N2S1 1624 aa33.26■■■□□ 2.91
CIRBP-205ENST00000585913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.25■■■□□ 2.915e-6■■■□□ 18.7
CIRBP-205ENST00000585913 ANKRD50Q9ULJ7 1429 aa33.25■■■□□ 2.91
CIRBP-205ENST00000585913 VWDEQ8N2E2 1590 aa33.24■■■□□ 2.91
CIRBP-205ENST00000585913 LMTK2Q8IWU2 1503 aa33.23■■■□□ 2.91
CIRBP-205ENST00000585913 NEURL4Q96JN8 1562 aa33.21■■■□□ 2.91
CIRBP-205ENST00000585913 ANKLE2Q86XL3 938 aa33.2■■■□□ 2.91
CIRBP-205ENST00000585913 ZNF335Q9H4Z2 1342 aaPredicted RBP33.18■■■□□ 2.9
CIRBP-205ENST00000585913 ROCK1Q13464 1354 aa33.17■■■□□ 2.9
CIRBP-205ENST00000585913 UBR1Q8IWV7 1749 aa33.16■■■□□ 2.9
CIRBP-205ENST00000585913 EFCAB6Q5THR3 1501 aa33.15■■■□□ 2.9
CIRBP-205ENST00000585913 IQSEC2Q5JU85 1478 aa33.13■■■□□ 2.89
CIRBP-205ENST00000585913 ITGAEP38570 1179 aa33.13■■■□□ 2.89
CIRBP-205ENST00000585913 MED14O60244 1454 aa33.1■■■□□ 2.89
CIRBP-205ENST00000585913 NPHP4O75161 1426 aaPredicted RBP33.09■■■□□ 2.89
CIRBP-205ENST00000585913 UNC13BO14795 1591 aa33.09■■■□□ 2.89
CIRBP-205ENST00000585913 ILDR2Q71H61 639 aa33.08■■■□□ 2.89
CIRBP-205ENST00000585913 DISP3Q9P2K9 1392 aa33.08■■■□□ 2.89
CIRBP-205ENST00000585913 PIK3C2BO00750 1634 aa33.07■■■□□ 2.88
CIRBP-205ENST00000585913 IQGAP1P46940 1657 aa33.06■■■□□ 2.88
CIRBP-205ENST00000585913 TET3O43151 1660 aa33.04■■■□□ 2.88
CIRBP-205ENST00000585913 SYNMO15061 1565 aa33.04■■■□□ 2.88
CIRBP-205ENST00000585913 RPRD2Q5VT52 1461 aaKnown RBP33.03■■■□□ 2.88
CIRBP-205ENST00000585913 NOS1P29475 1434 aa33.02■■■□□ 2.88
CIRBP-205ENST00000585913 RRBP1Q9P2E9 1410 aaKnown RBP33.02■■■□□ 2.88
CIRBP-205ENST00000585913 STAG3Q9UJ98 1225 aa33.02■■■□□ 2.88
CIRBP-205ENST00000585913 SLIT1O75093 1534 aa33.01■■■□□ 2.87
CIRBP-205ENST00000585913 GCC2Q8IWJ2 1684 aa33.01■■■□□ 2.87
CIRBP-205ENST00000585913 SCAF11Q99590 1463 aaKnown RBP33■■■□□ 2.87
CIRBP-205ENST00000585913 KDM5AP29375 1690 aaKnown RBP33■■■□□ 2.87
CIRBP-205ENST00000585913 ARHGAP23Q9P227 1491 aa32.99■■■□□ 2.87
CIRBP-205ENST00000585913 IDI1Q13907 227 aa32.98■■■□□ 2.87
CIRBP-205ENST00000585913 CPS1P31327 1500 aa32.97■■■□□ 2.87
CIRBP-205ENST00000585913 IQGAP3Q86VI3 1631 aa32.95■■■□□ 2.87
CIRBP-205ENST00000585913 TXNDC2Q86VQ3 553 aa32.95■■■□□ 2.87
CIRBP-205ENST00000585913 EID1Q9Y6B2 187 aa32.94■■■□□ 2.86
CIRBP-205ENST00000585913 SLC52A1Q9NWF4 448 aa32.93■■■□□ 2.86
CIRBP-205ENST00000585913 TMEM2Q9UHN6 1383 aa32.93■■■□□ 2.86
CIRBP-205ENST00000585913 ADGRB3O60242 1522 aa32.92■■■□□ 2.86
CIRBP-205ENST00000585913 LTKP29376 864 aa32.92■■■□□ 2.86
CIRBP-205ENST00000585913 E9PCH4 1651 aa32.9■■■□□ 2.86
CIRBP-205ENST00000585913 NUP155O75694 1391 aa32.89■■■□□ 2.86
CIRBP-205ENST00000585913 UBAP1LF5GYI3 381 aa32.86■■■□□ 2.85
CIRBP-205ENST00000585913 SOCS7O14512 581 aa32.84■■■□□ 2.85
CIRBP-205ENST00000585913 STRCP1A6NGW2 1772 aa32.81■■■□□ 2.84
CIRBP-205ENST00000585913 NAIPQ13075 1403 aa32.77■■■□□ 2.84
CIRBP-205ENST00000585913 MYO5BQ9ULV0 1848 aa32.77■■■□□ 2.84
CIRBP-205ENST00000585913 TMEM131LA2VDJ0 1609 aa32.77■■■□□ 2.84
CIRBP-205ENST00000585913 CHGAP10645 457 aaKnown RBP32.72■■■□□ 2.83
CIRBP-205ENST00000585913 LRRC7Q96NW7 1537 aa32.72■■■□□ 2.83
CIRBP-205ENST00000585913 TOM1O60784 492 aa32.71■■■□□ 2.83
CIRBP-205ENST00000585913 HFM1A2PYH4 1435 aa32.69■■■□□ 2.82
CIRBP-205ENST00000585913 ZFYVE9O95405 1425 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms