RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 PTPN23Q9H3S7 1636 aa28.34■■■□□ 2.13
HMG20B-216ENST00000585900 ZNF142P52746 1687 aaPredicted RBP28.33■■■□□ 2.13
HMG20B-216ENST00000585900 PTPRTO14522 1441 aa28.33■■■□□ 2.13
HMG20B-216ENST00000585900 CEP170BQ9Y4F5 1589 aaPredicted RBP28.33■■■□□ 2.12
HMG20B-216ENST00000585900 CAMSAP1Q5T5Y3 1602 aa28.32■■■□□ 2.12
HMG20B-216ENST00000585900 FGD6Q6ZV73 1430 aa28.32■■■□□ 2.12
HMG20B-216ENST00000585900 SHANK2Q9UPX8 1470 aa28.31■■■□□ 2.12
HMG20B-216ENST00000585900 EIF2AK4Q9P2K8 1649 aaKnown RBP28.3■■■□□ 2.12
HMG20B-216ENST00000585900 PZPP20742 1482 aa28.3■■■□□ 2.12
HMG20B-216ENST00000585900 CERKQ8TCT0 537 aa28.3■■■□□ 2.12
HMG20B-216ENST00000585900 RNF17Q9BXT8 1623 aaKnown RBP28.29■■■□□ 2.12
HMG20B-216ENST00000585900 DUOX2Q9NRD8 1548 aa28.28■■■□□ 2.12
HMG20B-216ENST00000585900 CROCC2H7BZ55 1655 aa28.27■■■□□ 2.12
HMG20B-216ENST00000585900 TCOF1Q13428 1488 aaKnown RBP28.27■■■□□ 2.12
HMG20B-216ENST00000585900 ABCC5O15440 1437 aa28.26■■■□□ 2.12
HMG20B-216ENST00000585900 TNRQ92752 1358 aa28.26■■■□□ 2.12
HMG20B-216ENST00000585900 PLA2R1Q13018 1463 aa28.26■■■□□ 2.11
HMG20B-216ENST00000585900 A2ML1A8K2U0 1454 aa28.25■■■□□ 2.11
HMG20B-216ENST00000585900 DAPK1P53355 1430 aa28.25■■■□□ 2.11
HMG20B-216ENST00000585900 KIF15Q9NS87 1388 aa28.24■■■□□ 2.11
HMG20B-216ENST00000585900 ZC3H13Q5T200 1668 aaKnown RBP28.23■■■□□ 2.11
HMG20B-216ENST00000585900 DNMT1P26358 1616 aaKnown RBP28.23■■■□□ 2.11
HMG20B-216ENST00000585900 FBXO31Q5XUX0 539 aaPredicted RBP28.21■■■□□ 2.11
HMG20B-216ENST00000585900 ABCC3O15438 1527 aa28.21■■■□□ 2.11
HMG20B-216ENST00000585900 ERBINQ96RT1 1412 aa28.2■■■□□ 2.11
HMG20B-216ENST00000585900 PKD2Q13563 968 aa28.2■■■□□ 2.1
HMG20B-216ENST00000585900 NCKAP5LQ9HCH0 1330 aa28.18■■■□□ 2.1
HMG20B-216ENST00000585900 RRP7BPQ9NSQ0 103 aa28.18■■■□□ 2.1
HMG20B-216ENST00000585900 ANKRD30AQ9BXX3 1397 aa28.16■■■□□ 2.1
HMG20B-216ENST00000585900 NLRP1Q9C000 1473 aa28.15■■■□□ 2.1
HMG20B-216ENST00000585900 MROH1Q8NDA8 1641 aa28.15■■■□□ 2.1
HMG20B-216ENST00000585900 FAM50AQ14320 339 aaKnown RBP28.12■■■□□ 2.09
HMG20B-216ENST00000585900 PRDM15P57071 1507 aaPredicted RBP28.12■■■□□ 2.09
HMG20B-216ENST00000585900 CHIC2Q9UKJ5 165 aa28.11■■■□□ 2.09
HMG20B-216ENST00000585900 CEP152O94986 1710 aa28.09■■■□□ 2.09
HMG20B-216ENST00000585900 SPATA31D1Q6ZQQ2 1576 aa28.08■■■□□ 2.09
HMG20B-216ENST00000585900 KANK1Q14678 1352 aa28.08■■■□□ 2.09
HMG20B-216ENST00000585900 ERVK-7P63135 1459 aa28.08■■■□□ 2.09
HMG20B-216ENST00000585900 UGGT1Q9NYU2 1555 aa28.07■■■□□ 2.08
HMG20B-216ENST00000585900 THEMISQ8N1K5 641 aaPredicted RBP28.07■■■□□ 2.08
HMG20B-216ENST00000585900 LTBP4Q8N2S1 1624 aa28.07■■■□□ 2.08
HMG20B-216ENST00000585900 ADGRL2O95490 1459 aa28.04■■■□□ 2.08
HMG20B-216ENST00000585900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.04■■■□□ 2.082e-7■□□□□ 9.7
HMG20B-216ENST00000585900 DEPDC5O75140 1603 aa28.03■■■□□ 2.08
HMG20B-216ENST00000585900 POLR1AO95602 1720 aaPredicted RBP28.03■■■□□ 2.08
HMG20B-216ENST00000585900 IQSEC2Q5JU85 1478 aa28.02■■■□□ 2.08
HMG20B-216ENST00000585900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.02■■■□□ 2.083e-7■■■□□ 14.6
HMG20B-216ENST00000585900 ARHGAP31Q2M1Z3 1444 aa28.01■■■□□ 2.08
HMG20B-216ENST00000585900 ZNF335Q9H4Z2 1342 aaPredicted RBP28.01■■■□□ 2.07
HMG20B-216ENST00000585900 ANKLE2Q86XL3 938 aa28.01■■■□□ 2.07
HMG20B-216ENST00000585900 NEURL4Q96JN8 1562 aa27.97■■■□□ 2.07
HMG20B-216ENST00000585900 LMTK2Q8IWU2 1503 aa27.93■■■□□ 2.06
HMG20B-216ENST00000585900 ANKRD50Q9ULJ7 1429 aa27.92■■■□□ 2.06
HMG20B-216ENST00000585900 VWDEQ8N2E2 1590 aa27.91■■■□□ 2.06
HMG20B-216ENST00000585900 NPHP4O75161 1426 aaPredicted RBP27.91■■■□□ 2.06
HMG20B-216ENST00000585900 MED14O60244 1454 aa27.89■■■□□ 2.06
HMG20B-216ENST00000585900 CFAP65Q6ZU64 1925 aaKnown RBP27.89■■■□□ 2.06
HMG20B-216ENST00000585900 UBR1Q8IWV7 1749 aa27.87■■■□□ 2.05
HMG20B-216ENST00000585900 EFCAB6Q5THR3 1501 aa27.86■■■□□ 2.05
HMG20B-216ENST00000585900 CPS1P31327 1500 aa27.85■■■□□ 2.05
HMG20B-216ENST00000585900 IQGAP1P46940 1657 aa27.84■■■□□ 2.05
HMG20B-216ENST00000585900 PPARGC1BQ86YN6 1023 aaKnown RBP27.84■■■□□ 2.05
HMG20B-216ENST00000585900 ROCK1Q13464 1354 aa27.84■■■□□ 2.05
HMG20B-216ENST00000585900 STAG3Q9UJ98 1225 aa27.83■■■□□ 2.05
HMG20B-216ENST00000585900 SCAF11Q99590 1463 aaKnown RBP27.82■■■□□ 2.04
HMG20B-216ENST00000585900 PIK3C2BO00750 1634 aa27.79■■■□□ 2.04
HMG20B-216ENST00000585900 SLIT1O75093 1534 aa27.79■■■□□ 2.04
HMG20B-216ENST00000585900 UBAP1LF5GYI3 381 aa27.79■■■□□ 2.04
HMG20B-216ENST00000585900 RPRD2Q5VT52 1461 aaKnown RBP27.78■■■□□ 2.04
HMG20B-216ENST00000585900 ARHGAP23Q9P227 1491 aa27.78■■■□□ 2.04
HMG20B-216ENST00000585900 ITGAEP38570 1179 aa27.78■■■□□ 2.04
HMG20B-216ENST00000585900 EID1Q9Y6B2 187 aa27.78■■■□□ 2.04
HMG20B-216ENST00000585900 NOS1P29475 1434 aa27.76■■■□□ 2.04
HMG20B-216ENST00000585900 UNC13BO14795 1591 aa27.76■■■□□ 2.03
HMG20B-216ENST00000585900 SYNMO15061 1565 aa27.76■■■□□ 2.03
HMG20B-216ENST00000585900 TXNDC2Q86VQ3 553 aa27.75■■■□□ 2.03
HMG20B-216ENST00000585900 TET3O43151 1660 aa27.75■■■□□ 2.03
HMG20B-216ENST00000585900 KDM5AP29375 1690 aaKnown RBP27.74■■■□□ 2.03
HMG20B-216ENST00000585900 TMEM2Q9UHN6 1383 aa27.73■■■□□ 2.03
HMG20B-216ENST00000585900 IDI1Q13907 227 aa27.73■■■□□ 2.03
HMG20B-216ENST00000585900 SLC52A1Q9NWF4 448 aa27.72■■■□□ 2.03
HMG20B-216ENST00000585900 LTKP29376 864 aa27.71■■■□□ 2.03
HMG20B-216ENST00000585900 ADGRB3O60242 1522 aa27.7■■■□□ 2.02
HMG20B-216ENST00000585900 GCC2Q8IWJ2 1684 aa27.68■■■□□ 2.02
HMG20B-216ENST00000585900 TOM1O60784 492 aa27.66■■■□□ 2.02
HMG20B-216ENST00000585900 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
HMG20B-216ENST00000585900 IQGAP3Q86VI3 1631 aa27.64■■■□□ 2.02
HMG20B-216ENST00000585900 NUP155O75694 1391 aa27.63■■■□□ 2.01
HMG20B-216ENST00000585900 SCAF1Q9H7N4 1312 aaKnown RBP27.63■■■□□ 2.01
HMG20B-216ENST00000585900 LRRC7Q96NW7 1537 aa27.59■■■□□ 2.01
HMG20B-216ENST00000585900 PIP4K2BP78356 416 aa27.58■■■□□ 2.01
HMG20B-216ENST00000585900 E9PCH4 1651 aa27.58■■■□□ 2.01
HMG20B-216ENST00000585900 STRCP1A6NGW2 1772 aa27.58■■■□□ 2
HMG20B-216ENST00000585900 HDGFP51858 240 aaKnown RBP27.55■■■□□ 2
HMG20B-216ENST00000585900 BCANQ96GW7 911 aa27.54■■■□□ 2
HMG20B-216ENST00000585900 DISP3Q9P2K9 1392 aa27.54■■■□□ 2
HMG20B-216ENST00000585900 PPP1R15AO75807 674 aaPredicted RBP27.53■■■□□ 2
HMG20B-216ENST00000585900 CHGAP10645 457 aaKnown RBP27.53■■■□□ 2
HMG20B-216ENST00000585900 TMEM131LA2VDJ0 1609 aa27.52■■■□□ 2
HMG20B-216ENST00000585900 ZFYVE9O95405 1425 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms