RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 BCORL1Q5H9F3 1711 aa26.43■■□□□ 1.82
RBFOX1-222ENST00000585867 RAB3GAP2Q9H2M9 1393 aa26.43■■□□□ 1.82
RBFOX1-222ENST00000585867 ZEB1P37275 1124 aaPredicted RBP26.41■■□□□ 1.82
RBFOX1-222ENST00000585867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.4■■□□□ 1.82
RBFOX1-222ENST00000585867 RNF17Q9BXT8 1623 aaKnown RBP26.37■■□□□ 1.81
RBFOX1-222ENST00000585867 DEPDC5O75140 1603 aa26.35■■□□□ 1.81
RBFOX1-222ENST00000585867 PPP6R1Q9UPN7 881 aa26.34■■□□□ 1.81
RBFOX1-222ENST00000585867 ACIN1Q9UKV3 1341 aaKnown RBP26.34■■□□□ 1.81
RBFOX1-222ENST00000585867 MROH1Q8NDA8 1641 aa26.33■■□□□ 1.81
RBFOX1-222ENST00000585867 TRIM52Q96A61 297 aa26.33■■□□□ 1.8
RBFOX1-222ENST00000585867 ESF1Q9H501 851 aaKnown RBP26.33■■□□□ 1.8
RBFOX1-222ENST00000585867 UNC13BO14795 1591 aa26.32■■□□□ 1.8
RBFOX1-222ENST00000585867 KANK1Q14678 1352 aa26.32■■□□□ 1.8
RBFOX1-222ENST00000585867 PRDM15P57071 1507 aaPredicted RBP26.31■■□□□ 1.8
RBFOX1-222ENST00000585867 WASHC2CQ9Y4E1 1318 aa26.31■■□□□ 1.8
RBFOX1-222ENST00000585867 NUP155O75694 1391 aa26.3■■□□□ 1.8
RBFOX1-222ENST00000585867 ADAMTSL3P82987 1691 aa26.29■■□□□ 1.8
RBFOX1-222ENST00000585867 DHX57Q6P158 1386 aaKnown RBP26.27■■□□□ 1.8
RBFOX1-222ENST00000585867 CLSPNQ9HAW4 1339 aa26.27■■□□□ 1.8
RBFOX1-222ENST00000585867 FER1L4A9Z1Z3 1794 aa26.25■■□□□ 1.79
RBFOX1-222ENST00000585867 MADDQ8WXG6 1647 aa26.25■■□□□ 1.79
RBFOX1-222ENST00000585867 KDM5DQ9BY66 1539 aa26.25■■□□□ 1.79
RBFOX1-222ENST00000585867 VWDEQ8N2E2 1590 aa26.25■■□□□ 1.79
RBFOX1-222ENST00000585867 FAM135AQ9P2D6 1515 aa26.23■■□□□ 1.79
RBFOX1-222ENST00000585867 CLTCQ00610 1675 aaKnown RBP26.23■■□□□ 1.79
RBFOX1-222ENST00000585867 KDM4FA0A1W2PPD8 638 aa26.23■■□□□ 1.79
RBFOX1-222ENST00000585867 ABCC3O15438 1527 aa26.23■■□□□ 1.79
RBFOX1-222ENST00000585867 CEP152O94986 1710 aa26.23■■□□□ 1.79
RBFOX1-222ENST00000585867 CNTLNQ9NXG0 1405 aa26.22■■□□□ 1.79
RBFOX1-222ENST00000585867 ZC3H13Q5T200 1668 aaKnown RBP26.21■■□□□ 1.79
RBFOX1-222ENST00000585867 IQGAP3Q86VI3 1631 aa26.21■■□□□ 1.79
RBFOX1-222ENST00000585867 RIMS1Q86UR5 1692 aaKnown RBP26.19■■□□□ 1.78
RBFOX1-222ENST00000585867 LMTK2Q8IWU2 1503 aa26.19■■□□□ 1.78
RBFOX1-222ENST00000585867 ZMYM3Q14202 1370 aa26.18■■□□□ 1.78
RBFOX1-222ENST00000585867 SLC4A1APQ9BWU0 796 aaKnown RBP26.17■■□□□ 1.78
RBFOX1-222ENST00000585867 PZPP20742 1482 aa26.16■■□□□ 1.78
RBFOX1-222ENST00000585867 MPHOSPH9Q99550 1183 aa26.16■■□□□ 1.78
RBFOX1-222ENST00000585867 CAMSAP1Q5T5Y3 1602 aa26.15■■□□□ 1.78
RBFOX1-222ENST00000585867 MROH2AA6NES4 1674 aa26.15■■□□□ 1.78
RBFOX1-222ENST00000585867 PLPPR3Q6T4P5 718 aa26.14■■□□□ 1.78
RBFOX1-222ENST00000585867 TET3O43151 1660 aa26.14■■□□□ 1.78
RBFOX1-222ENST00000585867 CEBPAP49715 358 aaPredicted RBP26.13■■□□□ 1.77
RBFOX1-222ENST00000585867 PTPRMP28827 1452 aa26.11■■□□□ 1.77
RBFOX1-222ENST00000585867 PKD2Q13563 968 aa26.11■■□□□ 1.77
RBFOX1-222ENST00000585867 EFCAB6Q5THR3 1501 aa26.1■■□□□ 1.77
RBFOX1-222ENST00000585867 ARHGAP31Q2M1Z3 1444 aa26.1■■□□□ 1.77
RBFOX1-222ENST00000585867 C3P01024 1663 aa26.1■■□□□ 1.77
RBFOX1-222ENST00000585867 NPATQ14207 1427 aa26.08■■□□□ 1.77
RBFOX1-222ENST00000585867 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
RBFOX1-222ENST00000585867 E9PCH4 1651 aa26.07■■□□□ 1.76
RBFOX1-222ENST00000585867 CFAP65Q6ZU64 1925 aaKnown RBP26.05■■□□□ 1.76
RBFOX1-222ENST00000585867 RPRD2Q5VT52 1461 aaKnown RBP26.05■■□□□ 1.76
RBFOX1-222ENST00000585867 FOXD1Q16676 465 aa26.04■■□□□ 1.76
RBFOX1-222ENST00000585867 PREX1Q8TCU6 1659 aa25.99■■□□□ 1.75
RBFOX1-222ENST00000585867 ERVK-7P63135 1459 aa25.99■■□□□ 1.75
RBFOX1-222ENST00000585867 SPATA31D1Q6ZQQ2 1576 aa25.97■■□□□ 1.75
RBFOX1-222ENST00000585867 NOS1P29475 1434 aa25.97■■□□□ 1.75
RBFOX1-222ENST00000585867 TNRQ92752 1358 aa25.94■■□□□ 1.74
RBFOX1-222ENST00000585867 PTPRTO14522 1441 aa25.94■■□□□ 1.74
RBFOX1-222ENST00000585867 SPHKAPQ2M3C7 1700 aa25.93■■□□□ 1.74
RBFOX1-222ENST00000585867 SYNMO15061 1565 aa25.91■■□□□ 1.74
RBFOX1-222ENST00000585867 PLA2R1Q13018 1463 aa25.91■■□□□ 1.74
RBFOX1-222ENST00000585867 SETD1BQ9UPS6 1966 aaKnown RBP25.88■■□□□ 1.73
RBFOX1-222ENST00000585867 ANKRD30BQ9BXX2 1392 aa25.87■■□□□ 1.73
RBFOX1-222ENST00000585867 SLC52A1Q9NWF4 448 aa25.87■■□□□ 1.73
RBFOX1-222ENST00000585867 TRPM2O94759 1503 aa25.87■■□□□ 1.73
RBFOX1-222ENST00000585867 IDI1Q13907 227 aa25.86■■□□□ 1.73
RBFOX1-222ENST00000585867 UGGT1Q9NYU2 1555 aa25.85■■□□□ 1.73
RBFOX1-222ENST00000585867 NLRP1Q9C000 1473 aa25.83■■□□□ 1.73
RBFOX1-222ENST00000585867 MYO3AQ8NEV4 1616 aa25.83■■□□□ 1.72
RBFOX1-222ENST00000585867 CCDC144AA2RUR9 1427 aa25.82■■□□□ 1.72
RBFOX1-222ENST00000585867 TIMELESSQ9UNS1 1208 aa25.82■■□□□ 1.72
RBFOX1-222ENST00000585867 PIK3C2BO00750 1634 aa25.81■■□□□ 1.72
RBFOX1-222ENST00000585867 CLTCL1P53675 1640 aa25.81■■□□□ 1.72
RBFOX1-222ENST00000585867 UHRF1BP1Q6BDS2 1440 aa25.81■■□□□ 1.72
RBFOX1-222ENST00000585867 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
RBFOX1-222ENST00000585867 CHGAP10645 457 aaKnown RBP25.79■■□□□ 1.72
RBFOX1-222ENST00000585867 STAG3Q9UJ98 1225 aa25.79■■□□□ 1.72
RBFOX1-222ENST00000585867 A2ML1A8K2U0 1454 aa25.78■■□□□ 1.72
RBFOX1-222ENST00000585867 CEP170BQ9Y4F5 1589 aaPredicted RBP25.76■■□□□ 1.71
RBFOX1-222ENST00000585867 SIN3AQ96ST3 1273 aa25.76■■□□□ 1.71
RBFOX1-222ENST00000585867 ZNF142P52746 1687 aaPredicted RBP25.73■■□□□ 1.71
RBFOX1-222ENST00000585867 KIF1BO60333 1816 aa25.73■■□□□ 1.71
RBFOX1-222ENST00000585867 NEUROD1Q13562 356 aa25.73■■□□□ 1.71
RBFOX1-222ENST00000585867 UBR1Q8IWV7 1749 aa25.71■■□□□ 1.71
RBFOX1-222ENST00000585867 THEMISQ8N1K5 641 aaPredicted RBP25.71■■□□□ 1.71
RBFOX1-222ENST00000585867 ADGRB3O60242 1522 aa25.71■■□□□ 1.71
RBFOX1-222ENST00000585867 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
RBFOX1-222ENST00000585867 LMTK3Q96Q04 1460 aa25.7■■□□□ 1.7
RBFOX1-222ENST00000585867 TONSLQ96HA7 1378 aa25.69■■□□□ 1.7
RBFOX1-222ENST00000585867 KDM5AP29375 1690 aaKnown RBP25.68■■□□□ 1.7
RBFOX1-222ENST00000585867 RGL3Q3MIN7 710 aa25.68■■□□□ 1.7
RBFOX1-222ENST00000585867 MYO5BQ9ULV0 1848 aa25.67■■□□□ 1.7
RBFOX1-222ENST00000585867 ZNF326Q5BKZ1 582 aaKnown RBP25.67■■□□□ 1.7
RBFOX1-222ENST00000585867 SPATA31E1Q6ZUB1 1445 aa25.66■■□□□ 1.7
RBFOX1-222ENST00000585867 HSPA2P54652 639 aa25.65■■□□□ 1.7
RBFOX1-222ENST00000585867 TMEM2Q9UHN6 1383 aa25.61■■□□□ 1.69
RBFOX1-222ENST00000585867 NEURL4Q96JN8 1562 aa25.61■■□□□ 1.69
RBFOX1-222ENST00000585867 RPGRIP1LQ68CZ1 1315 aa25.58■■□□□ 1.69
RBFOX1-222ENST00000585867 SLIT1O75093 1534 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms