RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 EIF2AK4Q9P2K8 1649 aaKnown RBP33.12■■■□□ 2.89
LAMA3-204ENST00000585600 REREQ9P2R6 1566 aa33.12■■■□□ 2.89
LAMA3-204ENST00000585600 MPHOSPH9Q99550 1183 aa33.09■■■□□ 2.89
LAMA3-204ENST00000585600 UNC13BO14795 1591 aa33.08■■■□□ 2.89
LAMA3-204ENST00000585600 PZPP20742 1482 aa33.08■■■□□ 2.89
LAMA3-204ENST00000585600 KDM5DQ9BY66 1539 aa33.05■■■□□ 2.88
LAMA3-204ENST00000585600 GGT6Q6P531 493 aa33.05■■■□□ 2.88
LAMA3-204ENST00000585600 AGLP35573 1532 aa33.05■■■□□ 2.88
LAMA3-204ENST00000585600 SIGLEC1Q9BZZ2 1709 aa33.04■■■□□ 2.88
LAMA3-204ENST00000585600 SLC4A1APQ9BWU0 796 aaKnown RBP33.04■■■□□ 2.88
LAMA3-204ENST00000585600 BCORL1Q5H9F3 1711 aa33.04■■■□□ 2.88
LAMA3-204ENST00000585600 DEPDC5O75140 1603 aa33.04■■■□□ 2.88
LAMA3-204ENST00000585600 MROH1Q8NDA8 1641 aa33.03■■■□□ 2.88
LAMA3-204ENST00000585600 RNF17Q9BXT8 1623 aaKnown RBP33■■■□□ 2.87
LAMA3-204ENST00000585600 PRDM15P57071 1507 aaPredicted RBP32.99■■■□□ 2.87
LAMA3-204ENST00000585600 FAM135AQ9P2D6 1515 aa32.99■■■□□ 2.87
LAMA3-204ENST00000585600 VWDEQ8N2E2 1590 aa32.97■■■□□ 2.87
LAMA3-204ENST00000585600 KANK1Q14678 1352 aa32.95■■■□□ 2.87
LAMA3-204ENST00000585600 IQGAP3Q86VI3 1631 aa32.94■■■□□ 2.86
LAMA3-204ENST00000585600 FOXD1Q16676 465 aa32.94■■■□□ 2.86
LAMA3-204ENST00000585600 PKD2Q13563 968 aa32.93■■■□□ 2.86
LAMA3-204ENST00000585600 ARID4BQ4LE39 1312 aaPredicted RBP32.93■■■□□ 2.86
LAMA3-204ENST00000585600 MLECQ14165 292 aa32.91■■■□□ 2.86
LAMA3-204ENST00000585600 WASHC2CQ9Y4E1 1318 aa32.88■■■□□ 2.85
LAMA3-204ENST00000585600 CLSPNQ9HAW4 1339 aa32.85■■■□□ 2.85
LAMA3-204ENST00000585600 LMTK2Q8IWU2 1503 aa32.85■■■□□ 2.85
LAMA3-204ENST00000585600 PPP6R1Q9UPN7 881 aa32.85■■■□□ 2.85
LAMA3-204ENST00000585600 ABCC3O15438 1527 aa32.84■■■□□ 2.85
LAMA3-204ENST00000585600 ANKRD30BQ9BXX2 1392 aa32.8■■■□□ 2.84
LAMA3-204ENST00000585600 TET3O43151 1660 aa32.77■■■□□ 2.84
LAMA3-204ENST00000585600 SIN3AQ96ST3 1273 aa32.77■■■□□ 2.84
LAMA3-204ENST00000585600 CEP152O94986 1710 aa32.76■■■□□ 2.83
LAMA3-204ENST00000585600 EFCAB6Q5THR3 1501 aa32.74■■■□□ 2.83
LAMA3-204ENST00000585600 NPATQ14207 1427 aa32.72■■■□□ 2.83
LAMA3-204ENST00000585600 E9PCH4 1651 aa32.72■■■□□ 2.83
LAMA3-204ENST00000585600 PLA2R1Q13018 1463 aa32.71■■■□□ 2.83
LAMA3-204ENST00000585600 ZC3H13Q5T200 1668 aaKnown RBP32.71■■■□□ 2.83
LAMA3-204ENST00000585600 ARHGAP31Q2M1Z3 1444 aa32.69■■■□□ 2.82
LAMA3-204ENST00000585600 CAMSAP1Q5T5Y3 1602 aa32.67■■■□□ 2.82
LAMA3-204ENST00000585600 ESF1Q9H501 851 aaKnown RBP32.67■■■□□ 2.82
LAMA3-204ENST00000585600 NEUROD1Q13562 356 aa32.66■■■□□ 2.82
LAMA3-204ENST00000585600 PTPRTO14522 1441 aa32.65■■■□□ 2.82
LAMA3-204ENST00000585600 RPRD2Q5VT52 1461 aaKnown RBP32.65■■■□□ 2.82
LAMA3-204ENST00000585600 CLTCQ00610 1675 aaKnown RBP32.64■■■□□ 2.82
LAMA3-204ENST00000585600 ZMYM3Q14202 1370 aa32.63■■■□□ 2.81
LAMA3-204ENST00000585600 CNTLNQ9NXG0 1405 aa32.6■■■□□ 2.81
LAMA3-204ENST00000585600 FBXO31Q5XUX0 539 aaPredicted RBP32.59■■■□□ 2.81
LAMA3-204ENST00000585600 NOS1P29475 1434 aa32.57■■■□□ 2.8
LAMA3-204ENST00000585600 TRPM2O94759 1503 aa32.55■■■□□ 2.8
LAMA3-204ENST00000585600 CCDC144AA2RUR9 1427 aa32.54■■■□□ 2.8
LAMA3-204ENST00000585600 ADAMTSL3P82987 1691 aa32.51■■■□□ 2.8
LAMA3-204ENST00000585600 SPHKAPQ2M3C7 1700 aa32.51■■■□□ 2.8
LAMA3-204ENST00000585600 CEBPAP49715 358 aaPredicted RBP32.51■■■□□ 2.79
LAMA3-204ENST00000585600 ERVK-7P63135 1459 aa32.5■■■□□ 2.79
LAMA3-204ENST00000585600 MADDQ8WXG6 1647 aa32.49■■■□□ 2.79
LAMA3-204ENST00000585600 ZNF316A6NFI3 1004 aaPredicted RBP32.49■■■□□ 2.79
LAMA3-204ENST00000585600 FER1L4A9Z1Z3 1794 aa32.49■■■□□ 2.79
LAMA3-204ENST00000585600 UGGT1Q9NYU2 1555 aa32.47■■■□□ 2.79
LAMA3-204ENST00000585600 MROH2AA6NES4 1674 aa32.47■■■□□ 2.79
LAMA3-204ENST00000585600 DIEXFQ68CQ4 756 aaKnown RBP32.46■■■□□ 2.79
LAMA3-204ENST00000585600 SYNMO15061 1565 aa32.45■■■□□ 2.79
LAMA3-204ENST00000585600 PREX1Q8TCU6 1659 aa32.44■■■□□ 2.78
LAMA3-204ENST00000585600 CFAP65Q6ZU64 1925 aaKnown RBP32.44■■■□□ 2.78
LAMA3-204ENST00000585600 SPATA31D1Q6ZQQ2 1576 aa32.43■■■□□ 2.78
LAMA3-204ENST00000585600 CLTCL1P53675 1640 aa32.43■■■□□ 2.78
LAMA3-204ENST00000585600 TIMELESSQ9UNS1 1208 aa32.43■■■□□ 2.78
LAMA3-204ENST00000585600 TONSLQ96HA7 1378 aa32.42■■■□□ 2.78
LAMA3-204ENST00000585600 IDI1Q13907 227 aa32.41■■■□□ 2.78
LAMA3-204ENST00000585600 SLC52A1Q9NWF4 448 aa32.4■■■□□ 2.78
LAMA3-204ENST00000585600 PLPPR3Q6T4P5 718 aa32.39■■■□□ 2.78
LAMA3-204ENST00000585600 L3MBTL2Q969R5 705 aa32.39■■■□□ 2.78
LAMA3-204ENST00000585600 RIMS1Q86UR5 1692 aaKnown RBP32.39■■■□□ 2.78
LAMA3-204ENST00000585600 C3P01024 1663 aa32.38■■■□□ 2.77
LAMA3-204ENST00000585600 SPATA31E1Q6ZUB1 1445 aa32.37■■■□□ 2.77
LAMA3-204ENST00000585600 PIK3C2BO00750 1634 aa32.35■■■□□ 2.77
LAMA3-204ENST00000585600 RGL3Q3MIN7 710 aa32.35■■■□□ 2.77
LAMA3-204ENST00000585600 TNRQ92752 1358 aa32.35■■■□□ 2.77
LAMA3-204ENST00000585600 KDM4FA0A1W2PPD8 638 aa32.32■■■□□ 2.76
LAMA3-204ENST00000585600 PTPRMP28827 1452 aa32.3■■■□□ 2.76
LAMA3-204ENST00000585600 PPP1R15AO75807 674 aaPredicted RBP32.29■■■□□ 2.76
LAMA3-204ENST00000585600 CHGAP10645 457 aaKnown RBP32.29■■■□□ 2.76
LAMA3-204ENST00000585600 ADGRB3O60242 1522 aa32.25■■■□□ 2.75
LAMA3-204ENST00000585600 NEURL4Q96JN8 1562 aa32.25■■■□□ 2.75
LAMA3-204ENST00000585600 DCAF11Q8TEB1 546 aa32.23■■■□□ 2.75
LAMA3-204ENST00000585600 KDM2AQ9Y2K7 1162 aa32.2■■■□□ 2.75
LAMA3-204ENST00000585600 KIF1BO60333 1816 aa32.19■■■□□ 2.74
LAMA3-204ENST00000585600 NLRP1Q9C000 1473 aa32.19■■■□□ 2.74
LAMA3-204ENST00000585600 ZNF326Q5BKZ1 582 aaKnown RBP32.19■■■□□ 2.74
LAMA3-204ENST00000585600 TMEM131LA2VDJ0 1609 aa32.18■■■□□ 2.74
LAMA3-204ENST00000585600 STAG3Q9UJ98 1225 aa32.17■■■□□ 2.74
LAMA3-204ENST00000585600 A2ML1A8K2U0 1454 aa32.16■■■□□ 2.74
LAMA3-204ENST00000585600 NBPF8Q3BBV2 869 aa32.14■■■□□ 2.74
LAMA3-204ENST00000585600 RPGRIP1LQ68CZ1 1315 aa32.12■■■□□ 2.73
LAMA3-204ENST00000585600 UHRF1BP1Q6BDS2 1440 aa32.08■■■□□ 2.73
LAMA3-204ENST00000585600 MYO3AQ8NEV4 1616 aa32.08■■■□□ 2.73
LAMA3-204ENST00000585600 STAC3Q96MF2 364 aa32.07■■■□□ 2.73
LAMA3-204ENST00000585600 NUTM2DQ5VT03 806 aaPredicted RBP32.05■■■□□ 2.72
LAMA3-204ENST00000585600 NEXMIFQ5QGS0 1516 aa32.05■■■□□ 2.72
LAMA3-204ENST00000585600 ADGRF5Q8IZF2 1346 aa32.05■■■□□ 2.72
LAMA3-204ENST00000585600 PRAG1Q86YV5 1406 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms