RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 CEBPAP49715 358 aaPredicted RBP25.23■■□□□ 1.63
GCDH-203ENST00000585420 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.62
GCDH-203ENST00000585420 ERBINQ96RT1 1412 aa25.2■■□□□ 1.62
GCDH-203ENST00000585420 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
GCDH-203ENST00000585420 CNTLNQ9NXG0 1405 aa25.18■■□□□ 1.62
GCDH-203ENST00000585420 ROCK1Q13464 1354 aa25.16■■□□□ 1.62
GCDH-203ENST00000585420 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
GCDH-203ENST00000585420 ZMYM3Q14202 1370 aa25.15■■□□□ 1.62
GCDH-203ENST00000585420 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
GCDH-203ENST00000585420 WASHC2CQ9Y4E1 1318 aa25.14■■□□□ 1.62
GCDH-203ENST00000585420 C3P01024 1663 aa25.13■■□□□ 1.61
GCDH-203ENST00000585420 ANKRD50Q9ULJ7 1429 aa25.12■■□□□ 1.61
GCDH-203ENST00000585420 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
GCDH-203ENST00000585420 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
GCDH-203ENST00000585420 KDM5DQ9BY66 1539 aa25.1■■□□□ 1.61
GCDH-203ENST00000585420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.09■■□□□ 1.61
GCDH-203ENST00000585420 FAM135AQ9P2D6 1515 aa25.06■■□□□ 1.6
GCDH-203ENST00000585420 PRDM15P57071 1507 aaPredicted RBP25.06■■□□□ 1.6
GCDH-203ENST00000585420 DEPDC5O75140 1603 aa25.05■■□□□ 1.6
GCDH-203ENST00000585420 ABCC3O15438 1527 aa25.05■■□□□ 1.6
GCDH-203ENST00000585420 LMTK3Q96Q04 1460 aa25.01■■□□□ 1.59
GCDH-203ENST00000585420 ZC3H13Q5T200 1668 aaKnown RBP25■■□□□ 1.59
GCDH-203ENST00000585420 FBXO31Q5XUX0 539 aaPredicted RBP25■■□□□ 1.59
GCDH-203ENST00000585420 CEP152O94986 1710 aa24.99■■□□□ 1.59
GCDH-203ENST00000585420 NAIPQ13075 1403 aa24.99■■□□□ 1.59
GCDH-203ENST00000585420 NPATQ14207 1427 aa24.99■■□□□ 1.59
GCDH-203ENST00000585420 KANK1Q14678 1352 aa24.99■■□□□ 1.59
GCDH-203ENST00000585420 PZPP20742 1482 aa24.98■■□□□ 1.59
GCDH-203ENST00000585420 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
GCDH-203ENST00000585420 SETD1BQ9UPS6 1966 aaKnown RBP24.96■■□□□ 1.59
GCDH-203ENST00000585420 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
GCDH-203ENST00000585420 HFM1A2PYH4 1435 aa24.95■■□□□ 1.58
GCDH-203ENST00000585420 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.58
GCDH-203ENST00000585420 CAMSAP1Q5T5Y3 1602 aa24.94■■□□□ 1.58
GCDH-203ENST00000585420 HSPA2P54652 639 aa24.93■■□□□ 1.58
GCDH-203ENST00000585420 UNC13BO14795 1591 aa24.93■■□□□ 1.58
GCDH-203ENST00000585420 LMTK2Q8IWU2 1503 aa24.92■■□□□ 1.58
GCDH-203ENST00000585420 GCC2Q8IWJ2 1684 aa24.91■■□□□ 1.58
GCDH-203ENST00000585420 ARHGAP31Q2M1Z3 1444 aa24.9■■□□□ 1.58
GCDH-203ENST00000585420 NUP155O75694 1391 aa24.89■■□□□ 1.57
GCDH-203ENST00000585420 TNRQ92752 1358 aa24.89■■□□□ 1.57
GCDH-203ENST00000585420 ERVK-7P63135 1459 aa24.86■■□□□ 1.57
GCDH-203ENST00000585420 SPATA31D1Q6ZQQ2 1576 aa24.86■■□□□ 1.57
GCDH-203ENST00000585420 MYO3AQ8NEV4 1616 aa24.85■■□□□ 1.57
GCDH-203ENST00000585420 EFCAB6Q5THR3 1501 aa24.85■■□□□ 1.57
GCDH-203ENST00000585420 SETD5Q9C0A6 1442 aa24.85■■□□□ 1.57
GCDH-203ENST00000585420 CFAP65Q6ZU64 1925 aaKnown RBP24.84■■□□□ 1.57
GCDH-203ENST00000585420 IQGAP3Q86VI3 1631 aa24.83■■□□□ 1.56
GCDH-203ENST00000585420 CEP170BQ9Y4F5 1589 aaPredicted RBP24.81■■□□□ 1.56
GCDH-203ENST00000585420 TET3O43151 1660 aa24.81■■□□□ 1.56
GCDH-203ENST00000585420 RAB3GAP2Q9H2M9 1393 aa24.8■■□□□ 1.56
GCDH-203ENST00000585420 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
GCDH-203ENST00000585420 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
GCDH-203ENST00000585420 A2ML1A8K2U0 1454 aa24.78■■□□□ 1.56
GCDH-203ENST00000585420 RPRD2Q5VT52 1461 aaKnown RBP24.76■■□□□ 1.55
GCDH-203ENST00000585420 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
GCDH-203ENST00000585420 NOS1P29475 1434 aa24.75■■□□□ 1.55
GCDH-203ENST00000585420 E9PCH4 1651 aa24.74■■□□□ 1.55
GCDH-203ENST00000585420 SYNMO15061 1565 aa24.72■■□□□ 1.55
GCDH-203ENST00000585420 UGGT1Q9NYU2 1555 aa24.71■■□□□ 1.55
GCDH-203ENST00000585420 IDI1Q13907 227 aa24.7■■□□□ 1.54
GCDH-203ENST00000585420 HRCP23327 699 aa24.69■■□□□ 1.54
GCDH-203ENST00000585420 STRCQ7RTU9 1775 aa24.68■■□□□ 1.54
GCDH-203ENST00000585420 SLC4A1APQ9BWU0 796 aaKnown RBP24.68■■□□□ 1.54
GCDH-203ENST00000585420 THEMISQ8N1K5 641 aaPredicted RBP24.67■■□□□ 1.54
GCDH-203ENST00000585420 SLC52A1Q9NWF4 448 aa24.66■■□□□ 1.54
GCDH-203ENST00000585420 NCKAP5LQ9HCH0 1330 aa24.65■■□□□ 1.54
GCDH-203ENST00000585420 PKD2Q13563 968 aa24.65■■□□□ 1.54
GCDH-203ENST00000585420 PLA2R1Q13018 1463 aa24.65■■□□□ 1.54
GCDH-203ENST00000585420 PIK3C2BO00750 1634 aa24.64■■□□□ 1.54
GCDH-203ENST00000585420 UBR1Q8IWV7 1749 aa24.63■■□□□ 1.53
GCDH-203ENST00000585420 MPHOSPH9Q99550 1183 aa24.61■■□□□ 1.53
GCDH-203ENST00000585420 STAG3Q9UJ98 1225 aa24.61■■□□□ 1.53
GCDH-203ENST00000585420 PTPRTO14522 1441 aa24.6■■□□□ 1.53
GCDH-203ENST00000585420 FOXD1Q16676 465 aa24.59■■□□□ 1.53
GCDH-203ENST00000585420 CCER1Q8TC90 406 aaPredicted RBP24.58■■□□□ 1.53
GCDH-203ENST00000585420 DMRT2Q9Y5R5 561 aa24.58■■□□□ 1.53
GCDH-203ENST00000585420 ACIN1Q9UKV3 1341 aaKnown RBP24.58■■□□□ 1.53
GCDH-203ENST00000585420 ANKLE2Q86XL3 938 aa24.57■■□□□ 1.52
GCDH-203ENST00000585420 SPHKAPQ2M3C7 1700 aa24.57■■□□□ 1.52
GCDH-203ENST00000585420 ADGRB3O60242 1522 aa24.55■■□□□ 1.52
GCDH-203ENST00000585420 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
GCDH-203ENST00000585420 KDM5AP29375 1690 aaKnown RBP24.54■■□□□ 1.52
GCDH-203ENST00000585420 CHGAP10645 457 aaKnown RBP24.53■■□□□ 1.52
GCDH-203ENST00000585420 TMEM2Q9UHN6 1383 aa24.53■■□□□ 1.52
GCDH-203ENST00000585420 LTKP29376 864 aa24.52■■□□□ 1.52
GCDH-203ENST00000585420 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
GCDH-203ENST00000585420 SLIT1O75093 1534 aa24.52■■□□□ 1.52
GCDH-203ENST00000585420 TRPM2O94759 1503 aa24.52■■□□□ 1.52
GCDH-203ENST00000585420 NEURL4Q96JN8 1562 aa24.51■■□□□ 1.51
GCDH-203ENST00000585420 TMEM131LA2VDJ0 1609 aa24.51■■□□□ 1.51
GCDH-203ENST00000585420 POLR1AO95602 1720 aaPredicted RBP24.5■■□□□ 1.51
GCDH-203ENST00000585420 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
GCDH-203ENST00000585420 CLTCL1P53675 1640 aa24.48■■□□□ 1.51
GCDH-203ENST00000585420 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
GCDH-203ENST00000585420 EID1Q9Y6B2 187 aa24.47■■□□□ 1.51
GCDH-203ENST00000585420 MED14O60244 1454 aa24.47■■□□□ 1.51
GCDH-203ENST00000585420 SCAF11Q99590 1463 aaKnown RBP24.47■■□□□ 1.51
GCDH-203ENST00000585420 NPHP4O75161 1426 aaPredicted RBP24.46■■□□□ 1.51
GCDH-203ENST00000585420 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms