RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 ROCK1Q13464 1354 aa20.31■□□□□ 0.84
CHAF1A-202ENST00000585371 ANKRD30AQ9BXX3 1397 aa20.31■□□□□ 0.84
CHAF1A-202ENST00000585371 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
CHAF1A-202ENST00000585371 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
CHAF1A-202ENST00000585371 EIF2AK4Q9P2K8 1649 aaKnown RBP20.3■□□□□ 0.84
CHAF1A-202ENST00000585371 ITGAEP38570 1179 aa20.29■□□□□ 0.84
CHAF1A-202ENST00000585371 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
CHAF1A-202ENST00000585371 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.84
CHAF1A-202ENST00000585371 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
CHAF1A-202ENST00000585371 CERKQ8TCT0 537 aa20.26■□□□□ 0.83
CHAF1A-202ENST00000585371 RNF17Q9BXT8 1623 aaKnown RBP20.26■□□□□ 0.83
CHAF1A-202ENST00000585371 STRCQ7RTU9 1775 aa20.26■□□□□ 0.83
CHAF1A-202ENST00000585371 GCC2Q8IWJ2 1684 aa20.26■□□□□ 0.83
CHAF1A-202ENST00000585371 MROH1Q8NDA8 1641 aa20.25■□□□□ 0.83
CHAF1A-202ENST00000585371 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
CHAF1A-202ENST00000585371 DEPDC5O75140 1603 aa20.24■□□□□ 0.83
CHAF1A-202ENST00000585371 MROH2AA6NES4 1674 aa20.22■□□□□ 0.83
CHAF1A-202ENST00000585371 NAIPQ13075 1403 aa20.2■□□□□ 0.82
CHAF1A-202ENST00000585371 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
CHAF1A-202ENST00000585371 KIF3BO15066 747 aa20.2■□□□□ 0.82
CHAF1A-202ENST00000585371 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
CHAF1A-202ENST00000585371 PTPRTO14522 1441 aa20.18■□□□□ 0.82
CHAF1A-202ENST00000585371 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
CHAF1A-202ENST00000585371 NPATQ14207 1427 aa20.17■□□□□ 0.82
CHAF1A-202ENST00000585371 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
CHAF1A-202ENST00000585371 UNC13BO14795 1591 aa20.16■□□□□ 0.82
CHAF1A-202ENST00000585371 VWDEQ8N2E2 1590 aa20.15■□□□□ 0.82
CHAF1A-202ENST00000585371 CEP152O94986 1710 aa20.14■□□□□ 0.81
CHAF1A-202ENST00000585371 FAM135AQ9P2D6 1515 aa20.14■□□□□ 0.81
CHAF1A-202ENST00000585371 GGT6Q6P531 493 aa20.14■□□□□ 0.81
CHAF1A-202ENST00000585371 KDM5DQ9BY66 1539 aa20.13■□□□□ 0.81
CHAF1A-202ENST00000585371 ZMYM3Q14202 1370 aa20.13■□□□□ 0.81
CHAF1A-202ENST00000585371 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
CHAF1A-202ENST00000585371 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
CHAF1A-202ENST00000585371 ABCC3O15438 1527 aa20.11■□□□□ 0.81
CHAF1A-202ENST00000585371 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
CHAF1A-202ENST00000585371 CAMSAP1Q5T5Y3 1602 aa20.07■□□□□ 0.8
CHAF1A-202ENST00000585371 IQGAP3Q86VI3 1631 aa20.07■□□□□ 0.8
CHAF1A-202ENST00000585371 LMTK2Q8IWU2 1503 aa20.07■□□□□ 0.8
CHAF1A-202ENST00000585371 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
CHAF1A-202ENST00000585371 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
CHAF1A-202ENST00000585371 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
CHAF1A-202ENST00000585371 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
CHAF1A-202ENST00000585371 LTBP4Q8N2S1 1624 aa20.03■□□□□ 0.8
CHAF1A-202ENST00000585371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.03■□□□□ 0.81e-7■■■■□ 22
CHAF1A-202ENST00000585371 WASHC2CQ9Y4E1 1318 aa20.02■□□□□ 0.8
CHAF1A-202ENST00000585371 CEP170BQ9Y4F5 1589 aaPredicted RBP20.02■□□□□ 0.8
CHAF1A-202ENST00000585371 TET3O43151 1660 aa20.02■□□□□ 0.8
CHAF1A-202ENST00000585371 PLA2R1Q13018 1463 aa20.01■□□□□ 0.79
CHAF1A-202ENST00000585371 CFAP65Q6ZU64 1925 aaKnown RBP20.01■□□□□ 0.79
CHAF1A-202ENST00000585371 KANK1Q14678 1352 aa20■□□□□ 0.79
CHAF1A-202ENST00000585371 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
CHAF1A-202ENST00000585371 EFCAB6Q5THR3 1501 aa19.99■□□□□ 0.79
CHAF1A-202ENST00000585371 ARHGAP31Q2M1Z3 1444 aa19.99■□□□□ 0.79
CHAF1A-202ENST00000585371 PZPP20742 1482 aa19.99■□□□□ 0.79
CHAF1A-202ENST00000585371 E9PCH4 1651 aa19.98■□□□□ 0.79
CHAF1A-202ENST00000585371 PKD2Q13563 968 aa19.98■□□□□ 0.79
CHAF1A-202ENST00000585371 NUP155O75694 1391 aa19.97■□□□□ 0.79
CHAF1A-202ENST00000585371 NCKAP5LQ9HCH0 1330 aa19.95■□□□□ 0.78
CHAF1A-202ENST00000585371 SPATA31D1Q6ZQQ2 1576 aa19.95■□□□□ 0.78
CHAF1A-202ENST00000585371 A2ML1A8K2U0 1454 aa19.94■□□□□ 0.78
CHAF1A-202ENST00000585371 HRCP23327 699 aa19.93■□□□□ 0.78
CHAF1A-202ENST00000585371 FBXO31Q5XUX0 539 aaPredicted RBP19.93■□□□□ 0.78
CHAF1A-202ENST00000585371 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
CHAF1A-202ENST00000585371 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
CHAF1A-202ENST00000585371 SYNMO15061 1565 aa19.89■□□□□ 0.77
CHAF1A-202ENST00000585371 TRIM52Q96A61 297 aa19.89■□□□□ 0.77
CHAF1A-202ENST00000585371 NOS1P29475 1434 aa19.88■□□□□ 0.77
CHAF1A-202ENST00000585371 TNRQ92752 1358 aa19.88■□□□□ 0.77
CHAF1A-202ENST00000585371 ZNF335Q9H4Z2 1342 aaPredicted RBP19.88■□□□□ 0.77
CHAF1A-202ENST00000585371 POLR1AO95602 1720 aaPredicted RBP19.88■□□□□ 0.77
CHAF1A-202ENST00000585371 ACIN1Q9UKV3 1341 aaKnown RBP19.86■□□□□ 0.77
CHAF1A-202ENST00000585371 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
CHAF1A-202ENST00000585371 DISP3Q9P2K9 1392 aa19.85■□□□□ 0.77
CHAF1A-202ENST00000585371 PIK3C2BO00750 1634 aa19.83■□□□□ 0.76
CHAF1A-202ENST00000585371 NLRP1Q9C000 1473 aa19.82■□□□□ 0.76
CHAF1A-202ENST00000585371 MPHOSPH9Q99550 1183 aa19.82■□□□□ 0.76
CHAF1A-202ENST00000585371 SLC4A1APQ9BWU0 796 aaKnown RBP19.82■□□□□ 0.76
CHAF1A-202ENST00000585371 NEURL4Q96JN8 1562 aa19.8■□□□□ 0.76
CHAF1A-202ENST00000585371 UGGT1Q9NYU2 1555 aa19.79■□□□□ 0.76
CHAF1A-202ENST00000585371 UBAP1LF5GYI3 381 aa19.79■□□□□ 0.76
CHAF1A-202ENST00000585371 PCGF6Q9BYE7 350 aa19.79■□□□□ 0.76
CHAF1A-202ENST00000585371 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
CHAF1A-202ENST00000585371 UBR1Q8IWV7 1749 aa19.78■□□□□ 0.76
CHAF1A-202ENST00000585371 TRPM2O94759 1503 aa19.77■□□□□ 0.76
CHAF1A-202ENST00000585371 CPS1P31327 1500 aa19.77■□□□□ 0.76
CHAF1A-202ENST00000585371 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.76
CHAF1A-202ENST00000585371 MYO5BQ9ULV0 1848 aa19.76■□□□□ 0.75
CHAF1A-202ENST00000585371 KDM5AP29375 1690 aaKnown RBP19.76■□□□□ 0.75
CHAF1A-202ENST00000585371 FOXD1Q16676 465 aa19.76■□□□□ 0.75
CHAF1A-202ENST00000585371 CLTCL1P53675 1640 aa19.76■□□□□ 0.75
CHAF1A-202ENST00000585371 IDI1Q13907 227 aa19.74■□□□□ 0.75
CHAF1A-202ENST00000585371 MED14O60244 1454 aa19.73■□□□□ 0.75
CHAF1A-202ENST00000585371 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
CHAF1A-202ENST00000585371 ILDR2Q71H61 639 aa19.72■□□□□ 0.75
CHAF1A-202ENST00000585371 SLC52A1Q9NWF4 448 aa19.71■□□□□ 0.75
CHAF1A-202ENST00000585371 ADGRB3O60242 1522 aa19.71■□□□□ 0.75
CHAF1A-202ENST00000585371 NPHP4O75161 1426 aaPredicted RBP19.7■□□□□ 0.74
CHAF1A-202ENST00000585371 KIF1BO60333 1816 aa19.69■□□□□ 0.74
CHAF1A-202ENST00000585371 IQGAP1P46940 1657 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms