RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 CLTCQ00610 1675 aaKnown RBP21.49■■□□□ 1.03
MKS1-213ENST00000585134 RNF17Q9BXT8 1623 aaKnown RBP21.48■■□□□ 1.03
MKS1-213ENST00000585134 ROCK1Q13464 1354 aa21.47■■□□□ 1.03
MKS1-213ENST00000585134 MROH1Q8NDA8 1641 aa21.45■■□□□ 1.02
MKS1-213ENST00000585134 CNTLNQ9NXG0 1405 aa21.45■■□□□ 1.02
MKS1-213ENST00000585134 ANKRD50Q9ULJ7 1429 aa21.44■■□□□ 1.02
MKS1-213ENST00000585134 KDM5DQ9BY66 1539 aa21.44■■□□□ 1.02
MKS1-213ENST00000585134 MROH2AA6NES4 1674 aa21.42■■□□□ 1.02
MKS1-213ENST00000585134 C3P01024 1663 aa21.42■■□□□ 1.02
MKS1-213ENST00000585134 CEBPAP49715 358 aaPredicted RBP21.41■■□□□ 1.02
MKS1-213ENST00000585134 CEP152O94986 1710 aa21.41■■□□□ 1.02
MKS1-213ENST00000585134 PRDM15P57071 1507 aaPredicted RBP21.4■■□□□ 1.02
MKS1-213ENST00000585134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.4■■□□□ 1.02
MKS1-213ENST00000585134 GCC2Q8IWJ2 1684 aa21.4■■□□□ 1.02
MKS1-213ENST00000585134 DEPDC5O75140 1603 aa21.4■■□□□ 1.02
MKS1-213ENST00000585134 ABCC3O15438 1527 aa21.39■■□□□ 1.01
MKS1-213ENST00000585134 FAM135AQ9P2D6 1515 aa21.39■■□□□ 1.01
MKS1-213ENST00000585134 ZC3H13Q5T200 1668 aaKnown RBP21.38■■□□□ 1.01
MKS1-213ENST00000585134 WASHC2CQ9Y4E1 1318 aa21.37■■□□□ 1.01
MKS1-213ENST00000585134 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
MKS1-213ENST00000585134 ZMYM3Q14202 1370 aa21.35■■□□□ 1.01
MKS1-213ENST00000585134 KANK1Q14678 1352 aa21.35■■□□□ 1.01
MKS1-213ENST00000585134 NAIPQ13075 1403 aa21.34■■□□□ 1.01
MKS1-213ENST00000585134 UNC13BO14795 1591 aa21.34■■□□□ 1.01
MKS1-213ENST00000585134 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1.01
MKS1-213ENST00000585134 HFM1A2PYH4 1435 aa21.32■■□□□ 1
MKS1-213ENST00000585134 VWDEQ8N2E2 1590 aa21.3■■□□□ 1
MKS1-213ENST00000585134 PZPP20742 1482 aa21.28■■□□□ 1
MKS1-213ENST00000585134 PREX1Q8TCU6 1659 aa21.27■■□□□ 1
MKS1-213ENST00000585134 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
MKS1-213ENST00000585134 NPATQ14207 1427 aa21.25■□□□□ 0.99
MKS1-213ENST00000585134 EFCAB6Q5THR3 1501 aa21.24■□□□□ 0.99
MKS1-213ENST00000585134 IQGAP3Q86VI3 1631 aa21.24■□□□□ 0.99
MKS1-213ENST00000585134 NUP155O75694 1391 aa21.23■□□□□ 0.99
MKS1-213ENST00000585134 UHRF1BP1Q6BDS2 1440 aa21.23■□□□□ 0.99
MKS1-213ENST00000585134 MYO3AQ8NEV4 1616 aa21.23■□□□□ 0.99
MKS1-213ENST00000585134 FBXO31Q5XUX0 539 aaPredicted RBP21.23■□□□□ 0.99
MKS1-213ENST00000585134 TET3O43151 1660 aa21.22■□□□□ 0.99
MKS1-213ENST00000585134 ERVK-7P63135 1459 aa21.22■□□□□ 0.99
MKS1-213ENST00000585134 LMTK3Q96Q04 1460 aa21.22■□□□□ 0.99
MKS1-213ENST00000585134 TNRQ92752 1358 aa21.22■□□□□ 0.99
MKS1-213ENST00000585134 CFAP65Q6ZU64 1925 aaKnown RBP21.2■□□□□ 0.98
MKS1-213ENST00000585134 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
MKS1-213ENST00000585134 SPATA31D1Q6ZQQ2 1576 aa21.19■□□□□ 0.98
MKS1-213ENST00000585134 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
MKS1-213ENST00000585134 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
MKS1-213ENST00000585134 SETD1BQ9UPS6 1966 aaKnown RBP21.16■□□□□ 0.98
MKS1-213ENST00000585134 HSPA2P54652 639 aa21.15■□□□□ 0.98
MKS1-213ENST00000585134 E9PCH4 1651 aa21.15■□□□□ 0.98
MKS1-213ENST00000585134 ZNF142P52746 1687 aaPredicted RBP21.15■□□□□ 0.98
MKS1-213ENST00000585134 CEP170BQ9Y4F5 1589 aaPredicted RBP21.14■□□□□ 0.98
MKS1-213ENST00000585134 RAB3GAP2Q9H2M9 1393 aa21.13■□□□□ 0.97
MKS1-213ENST00000585134 SYNMO15061 1565 aa21.11■□□□□ 0.97
MKS1-213ENST00000585134 RPRD2Q5VT52 1461 aaKnown RBP21.11■□□□□ 0.97
MKS1-213ENST00000585134 A2ML1A8K2U0 1454 aa21.1■□□□□ 0.97
MKS1-213ENST00000585134 NLRP1Q9C000 1473 aa21.09■□□□□ 0.97
MKS1-213ENST00000585134 NOS1P29475 1434 aa21.08■□□□□ 0.97
MKS1-213ENST00000585134 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
MKS1-213ENST00000585134 PIK3C2BO00750 1634 aa21.04■□□□□ 0.96
MKS1-213ENST00000585134 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
MKS1-213ENST00000585134 TRIM26Q12899 539 aaPredicted RBP21.04■□□□□ 0.96
MKS1-213ENST00000585134 UGGT1Q9NYU2 1555 aa21.04■□□□□ 0.96
MKS1-213ENST00000585134 PKD2Q13563 968 aa21.03■□□□□ 0.96
MKS1-213ENST00000585134 UBR1Q8IWV7 1749 aa21.01■□□□□ 0.95
MKS1-213ENST00000585134 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
MKS1-213ENST00000585134 FOXD1Q16676 465 aa20.98■□□□□ 0.95
MKS1-213ENST00000585134 MPHOSPH9Q99550 1183 aa20.98■□□□□ 0.95
MKS1-213ENST00000585134 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
MKS1-213ENST00000585134 IDI1Q13907 227 aa20.97■□□□□ 0.95
MKS1-213ENST00000585134 TRPM2O94759 1503 aa20.97■□□□□ 0.95
MKS1-213ENST00000585134 PLA2R1Q13018 1463 aa20.96■□□□□ 0.95
MKS1-213ENST00000585134 STRCQ7RTU9 1775 aa20.96■□□□□ 0.95
MKS1-213ENST00000585134 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
MKS1-213ENST00000585134 CLTCL1P53675 1640 aa20.95■□□□□ 0.94
MKS1-213ENST00000585134 ACIN1Q9UKV3 1341 aaKnown RBP20.95■□□□□ 0.94
MKS1-213ENST00000585134 PTPRTO14522 1441 aa20.95■□□□□ 0.94
MKS1-213ENST00000585134 THEMISQ8N1K5 641 aaPredicted RBP20.94■□□□□ 0.94
MKS1-213ENST00000585134 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
MKS1-213ENST00000585134 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
MKS1-213ENST00000585134 POLR1AO95602 1720 aaPredicted RBP20.93■□□□□ 0.94
MKS1-213ENST00000585134 MYO5BQ9ULV0 1848 aa20.93■□□□□ 0.94
MKS1-213ENST00000585134 TMEM131LA2VDJ0 1609 aa20.91■□□□□ 0.94
MKS1-213ENST00000585134 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
MKS1-213ENST00000585134 HRCP23327 699 aa20.89■□□□□ 0.93
MKS1-213ENST00000585134 NEURL4Q96JN8 1562 aa20.89■□□□□ 0.93
MKS1-213ENST00000585134 SLIT1O75093 1534 aa20.87■□□□□ 0.93
MKS1-213ENST00000585134 ARHGAP23Q9P227 1491 aa20.87■□□□□ 0.93
MKS1-213ENST00000585134 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
MKS1-213ENST00000585134 ANKLE2Q86XL3 938 aa20.86■□□□□ 0.93
MKS1-213ENST00000585134 SCAF11Q99590 1463 aaKnown RBP20.86■□□□□ 0.93
MKS1-213ENST00000585134 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
MKS1-213ENST00000585134 KIF1BO60333 1816 aa20.85■□□□□ 0.93
MKS1-213ENST00000585134 RIMS2Q9UQ26 1411 aa20.83■□□□□ 0.93
MKS1-213ENST00000585134 NPHP4O75161 1426 aaPredicted RBP20.82■□□□□ 0.92
MKS1-213ENST00000585134 TXNDC2Q86VQ3 553 aa20.82■□□□□ 0.92
MKS1-213ENST00000585134 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
MKS1-213ENST00000585134 EID1Q9Y6B2 187 aa20.82■□□□□ 0.92
MKS1-213ENST00000585134 IQGAP1P46940 1657 aa20.81■□□□□ 0.92
MKS1-213ENST00000585134 ZNF326Q5BKZ1 582 aaKnown RBP20.81■□□□□ 0.92
MKS1-213ENST00000585134 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 227.5 ms