RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
GGA3-219ENST00000584550 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
GGA3-219ENST00000584550 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
GGA3-219ENST00000584550 TNRQ92752 1358 aa16.62■□□□□ 0.25
GGA3-219ENST00000584550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.62■□□□□ 0.25
GGA3-219ENST00000584550 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
GGA3-219ENST00000584550 FYCO1Q9BQS8 1478 aa16.6■□□□□ 0.25
GGA3-219ENST00000584550 KIF3BO15066 747 aa16.59■□□□□ 0.25
GGA3-219ENST00000584550 VWDEQ8N2E2 1590 aa16.59■□□□□ 0.25
GGA3-219ENST00000584550 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
GGA3-219ENST00000584550 THEMISQ8N1K5 641 aaPredicted RBP16.57■□□□□ 0.24
GGA3-219ENST00000584550 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
GGA3-219ENST00000584550 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
GGA3-219ENST00000584550 DHX29Q7Z478 1369 aaKnown RBP16.55■□□□□ 0.24
GGA3-219ENST00000584550 PZPP20742 1482 aa16.54■□□□□ 0.24
GGA3-219ENST00000584550 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
GGA3-219ENST00000584550 RGS17Q9UGC6 210 aaPredicted RBP16.53■□□□□ 0.24
GGA3-219ENST00000584550 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
GGA3-219ENST00000584550 UGGT1Q9NYU2 1555 aa16.52■□□□□ 0.24
GGA3-219ENST00000584550 STRCP1A6NGW2 1772 aa16.52■□□□□ 0.24
GGA3-219ENST00000584550 MIA2Q96PC5 1412 aa16.52■□□□□ 0.23
GGA3-219ENST00000584550 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
GGA3-219ENST00000584550 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
GGA3-219ENST00000584550 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
GGA3-219ENST00000584550 MED14O60244 1454 aa16.5■□□□□ 0.23
GGA3-219ENST00000584550 RTEL1-TNFRSF6BF6WH68 1400 aa16.5■□□□□ 0.23
GGA3-219ENST00000584550 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
GGA3-219ENST00000584550 DEPDC5O75140 1603 aa16.49■□□□□ 0.23
GGA3-219ENST00000584550 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
GGA3-219ENST00000584550 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
GGA3-219ENST00000584550 RNF17Q9BXT8 1623 aaKnown RBP16.46■□□□□ 0.23
GGA3-219ENST00000584550 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
GGA3-219ENST00000584550 POTEAQ6S8J7 498 aa16.42■□□□□ 0.22
GGA3-219ENST00000584550 SYNMO15061 1565 aa16.42■□□□□ 0.22
GGA3-219ENST00000584550 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
GGA3-219ENST00000584550 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
GGA3-219ENST00000584550 ZC3H13Q5T200 1668 aaKnown RBP16.39■□□□□ 0.21
GGA3-219ENST00000584550 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.21
GGA3-219ENST00000584550 TSPY4P0CV99 314 aa16.38■□□□□ 0.21
GGA3-219ENST00000584550 TSPY10P0CW01 314 aa16.38■□□□□ 0.21
GGA3-219ENST00000584550 LTKP29376 864 aa16.38■□□□□ 0.21
GGA3-219ENST00000584550 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
GGA3-219ENST00000584550 RSPH4AQ5TD94 716 aa16.37■□□□□ 0.21
GGA3-219ENST00000584550 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
GGA3-219ENST00000584550 XIRP1Q702N8 1843 aaKnown RBP16.37■□□□□ 0.21
GGA3-219ENST00000584550 ABCC3O15438 1527 aa16.36■□□□□ 0.21
GGA3-219ENST00000584550 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
GGA3-219ENST00000584550 ERVK-7P63135 1459 aa16.35■□□□□ 0.21
GGA3-219ENST00000584550 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
GGA3-219ENST00000584550 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
GGA3-219ENST00000584550 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
GGA3-219ENST00000584550 CEP152O94986 1710 aa16.32■□□□□ 0.2
GGA3-219ENST00000584550 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
GGA3-219ENST00000584550 FAM135BQ49AJ0 1406 aa16.31■□□□□ 0.2
GGA3-219ENST00000584550 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
GGA3-219ENST00000584550 ARHGEF5Q12774 1597 aa16.3■□□□□ 0.2
GGA3-219ENST00000584550 TMEM94Q12767 1356 aa16.28■□□□□ 0.2
GGA3-219ENST00000584550 ROBO1Q9Y6N7 1651 aa16.28■□□□□ 0.2
GGA3-219ENST00000584550 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
GGA3-219ENST00000584550 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
GGA3-219ENST00000584550 ARHGAP23Q9P227 1491 aa16.27■□□□□ 0.19
GGA3-219ENST00000584550 MROH1Q8NDA8 1641 aa16.27■□□□□ 0.19
GGA3-219ENST00000584550 SLIT1O75093 1534 aa16.26■□□□□ 0.19
GGA3-219ENST00000584550 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
GGA3-219ENST00000584550 EIF2AK4Q9P2K8 1649 aaKnown RBP16.24■□□□□ 0.19
GGA3-219ENST00000584550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
GGA3-219ENST00000584550 KCNA6P17658 529 aa16.23■□□□□ 0.19
GGA3-219ENST00000584550 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
GGA3-219ENST00000584550 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
GGA3-219ENST00000584550 MAST1Q9Y2H9 1570 aa16.21■□□□□ 0.19
GGA3-219ENST00000584550 BCANQ96GW7 911 aa16.21■□□□□ 0.19
GGA3-219ENST00000584550 MAP3K1Q13233 1512 aa16.2■□□□□ 0.18
GGA3-219ENST00000584550 PHLPP1O60346 1717 aa16.2■□□□□ 0.18
GGA3-219ENST00000584550 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
GGA3-219ENST00000584550 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
GGA3-219ENST00000584550 IDI1Q13907 227 aa16.18■□□□□ 0.18
GGA3-219ENST00000584550 UPF1Q92900 1129 aaKnown RBP eCLIP16.18■□□□□ 0.18
GGA3-219ENST00000584550 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
GGA3-219ENST00000584550 JCADQ9P266 1359 aa16.17■□□□□ 0.18
GGA3-219ENST00000584550 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
GGA3-219ENST00000584550 ARHGAP31Q2M1Z3 1444 aa16.17■□□□□ 0.18
GGA3-219ENST00000584550 MSH6P52701 1360 aa16.16■□□□□ 0.18
GGA3-219ENST00000584550 EFCAB6Q5THR3 1501 aa16.16■□□□□ 0.18
GGA3-219ENST00000584550 MEX3CQ5U5Q3 659 aaKnown RBP16.16■□□□□ 0.18
GGA3-219ENST00000584550 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
GGA3-219ENST00000584550 PRDM15P57071 1507 aaPredicted RBP16.15■□□□□ 0.18
GGA3-219ENST00000584550 TET3O43151 1660 aa16.15■□□□□ 0.18
GGA3-219ENST00000584550 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
GGA3-219ENST00000584550 KANK4Q5T7N3 995 aaPredicted RBP16.13■□□□□ 0.17
GGA3-219ENST00000584550 LRP6O75581 1613 aa16.12■□□□□ 0.17
GGA3-219ENST00000584550 ZNF772Q68DY9 489 aaPredicted RBP16.11■□□□□ 0.17
GGA3-219ENST00000584550 KANK1Q14678 1352 aa16.11■□□□□ 0.17
GGA3-219ENST00000584550 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
GGA3-219ENST00000584550 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
GGA3-219ENST00000584550 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
GGA3-219ENST00000584550 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
GGA3-219ENST00000584550 COL16A1Q07092 1604 aaPredicted RBP16.09■□□□□ 0.17
GGA3-219ENST00000584550 ERBINQ96RT1 1412 aa16.09■□□□□ 0.17
GGA3-219ENST00000584550 KDM5AP29375 1690 aaKnown RBP16.08■□□□□ 0.17
GGA3-219ENST00000584550 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms