RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 RNF17Q9BXT8 1623 aaKnown RBP23.5■■□□□ 1.35
ITGB4-210ENST00000584025 NCOA1Q15788 1441 aa23.5■■□□□ 1.35
ITGB4-210ENST00000584025 CNTLNQ9NXG0 1405 aa23.5■■□□□ 1.35
ITGB4-210ENST00000584025 SETD1BQ9UPS6 1966 aaKnown RBP23.49■■□□□ 1.35
ITGB4-210ENST00000584025 PTPRKQ15262 1439 aa23.48■■□□□ 1.35
ITGB4-210ENST00000584025 ERBINQ96RT1 1412 aa23.46■■□□□ 1.35
ITGB4-210ENST00000584025 CEBPAP49715 358 aaPredicted RBP23.45■■□□□ 1.34
ITGB4-210ENST00000584025 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
ITGB4-210ENST00000584025 CEP152O94986 1710 aa23.44■■□□□ 1.34
ITGB4-210ENST00000584025 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
ITGB4-210ENST00000584025 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
ITGB4-210ENST00000584025 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
ITGB4-210ENST00000584025 ZC3H13Q5T200 1668 aaKnown RBP23.42■■□□□ 1.34
ITGB4-210ENST00000584025 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
ITGB4-210ENST00000584025 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
ITGB4-210ENST00000584025 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
ITGB4-210ENST00000584025 PREX1Q8TCU6 1659 aa23.4■■□□□ 1.34
ITGB4-210ENST00000584025 ZMYM3Q14202 1370 aa23.4■■□□□ 1.34
ITGB4-210ENST00000584025 WASHC2CQ9Y4E1 1318 aa23.39■■□□□ 1.34
ITGB4-210ENST00000584025 ANKRD50Q9ULJ7 1429 aa23.37■■□□□ 1.33
ITGB4-210ENST00000584025 PRDM15P57071 1507 aaPredicted RBP23.37■■□□□ 1.33
ITGB4-210ENST00000584025 ABCC3O15438 1527 aa23.35■■□□□ 1.33
ITGB4-210ENST00000584025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.35■■□□□ 1.33
ITGB4-210ENST00000584025 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
ITGB4-210ENST00000584025 GCC2Q8IWJ2 1684 aa23.32■■□□□ 1.32
ITGB4-210ENST00000584025 KANK1Q14678 1352 aa23.32■■□□□ 1.32
ITGB4-210ENST00000584025 NPATQ14207 1427 aa23.3■■□□□ 1.32
ITGB4-210ENST00000584025 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
ITGB4-210ENST00000584025 UNC13BO14795 1591 aa23.28■■□□□ 1.32
ITGB4-210ENST00000584025 PZPP20742 1482 aa23.28■■□□□ 1.32
ITGB4-210ENST00000584025 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
ITGB4-210ENST00000584025 VWDEQ8N2E2 1590 aa23.27■■□□□ 1.32
ITGB4-210ENST00000584025 MYO3AQ8NEV4 1616 aa23.26■■□□□ 1.31
ITGB4-210ENST00000584025 FBXO31Q5XUX0 539 aaPredicted RBP23.22■■□□□ 1.31
ITGB4-210ENST00000584025 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
ITGB4-210ENST00000584025 NAIPQ13075 1403 aa23.21■■□□□ 1.31
ITGB4-210ENST00000584025 LMTK2Q8IWU2 1503 aa23.21■■□□□ 1.31
ITGB4-210ENST00000584025 TET3O43151 1660 aa23.21■■□□□ 1.31
ITGB4-210ENST00000584025 IQGAP3Q86VI3 1631 aa23.19■■□□□ 1.3
ITGB4-210ENST00000584025 HFM1A2PYH4 1435 aa23.19■■□□□ 1.3
ITGB4-210ENST00000584025 TNRQ92752 1358 aa23.19■■□□□ 1.3
ITGB4-210ENST00000584025 HSPA2P54652 639 aa23.19■■□□□ 1.3
ITGB4-210ENST00000584025 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
ITGB4-210ENST00000584025 EFCAB6Q5THR3 1501 aa23.18■■□□□ 1.3
ITGB4-210ENST00000584025 CEP170BQ9Y4F5 1589 aaPredicted RBP23.17■■□□□ 1.3
ITGB4-210ENST00000584025 ERVK-7P63135 1459 aa23.17■■□□□ 1.3
ITGB4-210ENST00000584025 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
ITGB4-210ENST00000584025 NUP155O75694 1391 aa23.14■■□□□ 1.3
ITGB4-210ENST00000584025 E9PCH4 1651 aa23.13■■□□□ 1.29
ITGB4-210ENST00000584025 A2ML1A8K2U0 1454 aa23.12■■□□□ 1.29
ITGB4-210ENST00000584025 STRCQ7RTU9 1775 aa23.1■■□□□ 1.29
ITGB4-210ENST00000584025 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
ITGB4-210ENST00000584025 RPRD2Q5VT52 1461 aaKnown RBP23.08■■□□□ 1.29
ITGB4-210ENST00000584025 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
ITGB4-210ENST00000584025 SYNMO15061 1565 aa23.06■■□□□ 1.28
ITGB4-210ENST00000584025 UBR1Q8IWV7 1749 aa23.05■■□□□ 1.28
ITGB4-210ENST00000584025 UGGT1Q9NYU2 1555 aa23.04■■□□□ 1.28
ITGB4-210ENST00000584025 PIK3C2BO00750 1634 aa23.04■■□□□ 1.28
ITGB4-210ENST00000584025 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
ITGB4-210ENST00000584025 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
ITGB4-210ENST00000584025 NOS1P29475 1434 aa23.02■■□□□ 1.28
ITGB4-210ENST00000584025 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
ITGB4-210ENST00000584025 MYO5BQ9ULV0 1848 aa23.02■■□□□ 1.28
ITGB4-210ENST00000584025 PLA2R1Q13018 1463 aa22.98■■□□□ 1.27
ITGB4-210ENST00000584025 THEMISQ8N1K5 641 aaPredicted RBP22.98■■□□□ 1.27
ITGB4-210ENST00000584025 KDM5AP29375 1690 aaKnown RBP22.97■■□□□ 1.27
ITGB4-210ENST00000584025 STAG3Q9UJ98 1225 aa22.95■■□□□ 1.26
ITGB4-210ENST00000584025 NCKAP5LQ9HCH0 1330 aa22.94■■□□□ 1.26
ITGB4-210ENST00000584025 IDI1Q13907 227 aa22.94■■□□□ 1.26
ITGB4-210ENST00000584025 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
ITGB4-210ENST00000584025 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
ITGB4-210ENST00000584025 SLC52A1Q9NWF4 448 aa22.93■■□□□ 1.26
ITGB4-210ENST00000584025 DMRT2Q9Y5R5 561 aa22.93■■□□□ 1.26
ITGB4-210ENST00000584025 ACIN1Q9UKV3 1341 aaKnown RBP22.92■■□□□ 1.26
ITGB4-210ENST00000584025 PKD2Q13563 968 aa22.92■■□□□ 1.26
ITGB4-210ENST00000584025 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
ITGB4-210ENST00000584025 KIF1BO60333 1816 aa22.9■■□□□ 1.26
ITGB4-210ENST00000584025 PTPRTO14522 1441 aa22.89■■□□□ 1.25
ITGB4-210ENST00000584025 ANKLE2Q86XL3 938 aa22.88■■□□□ 1.25
ITGB4-210ENST00000584025 TMEM131LA2VDJ0 1609 aa22.88■■□□□ 1.25
ITGB4-210ENST00000584025 NEURL4Q96JN8 1562 aa22.87■■□□□ 1.25
ITGB4-210ENST00000584025 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
ITGB4-210ENST00000584025 SLIT1O75093 1534 aa22.86■■□□□ 1.25
ITGB4-210ENST00000584025 TRPM2O94759 1503 aa22.86■■□□□ 1.25
ITGB4-210ENST00000584025 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
ITGB4-210ENST00000584025 MPHOSPH9Q99550 1183 aa22.85■■□□□ 1.25
ITGB4-210ENST00000584025 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
ITGB4-210ENST00000584025 ARHGAP23Q9P227 1491 aa22.84■■□□□ 1.25
ITGB4-210ENST00000584025 TMEM2Q9UHN6 1383 aa22.82■■□□□ 1.24
ITGB4-210ENST00000584025 SCAF11Q99590 1463 aaKnown RBP22.81■■□□□ 1.24
ITGB4-210ENST00000584025 FOXD1Q16676 465 aa22.81■■□□□ 1.24
ITGB4-210ENST00000584025 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
ITGB4-210ENST00000584025 HRCP23327 699 aa22.8■■□□□ 1.24
ITGB4-210ENST00000584025 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
ITGB4-210ENST00000584025 NPHP4O75161 1426 aaPredicted RBP22.8■■□□□ 1.24
ITGB4-210ENST00000584025 MED14O60244 1454 aa22.79■■□□□ 1.24
ITGB4-210ENST00000584025 LTKP29376 864 aa22.77■■□□□ 1.24
ITGB4-210ENST00000584025 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
ITGB4-210ENST00000584025 RIMS2Q9UQ26 1411 aa22.75■■□□□ 1.23
ITGB4-210ENST00000584025 ZFYVE9O95405 1425 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms