RNA–Protein interactions for RNA: ENST00000583903.5

PPP4R1-226, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-226ENST00000583903 A2MP01023 1474 aa11.75□□□□□ -0.53
PPP4R1-226ENST00000583903 SYNMO15061 1565 aa11.75□□□□□ -0.53
PPP4R1-226ENST00000583903 FBXO31Q5XUX0 539 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-226ENST00000583903 FMN1Q68DA7 1419 aa11.72□□□□□ -0.53
PPP4R1-226ENST00000583903 IQGAP1P46940 1657 aa11.71□□□□□ -0.53
PPP4R1-226ENST00000583903 ATP7AQ04656 1500 aa11.71□□□□□ -0.53
PPP4R1-226ENST00000583903 FAM135AQ9P2D6 1515 aa11.7□□□□□ -0.54
PPP4R1-226ENST00000583903 MSH5O43196 834 aa11.69□□□□□ -0.54
PPP4R1-226ENST00000583903 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.549e-6■■■■□ 20.2
PPP4R1-226ENST00000583903 UGGT1Q9NYU2 1555 aa11.69□□□□□ -0.54
PPP4R1-226ENST00000583903 SYCP2Q9BX26 1530 aa11.69□□□□□ -0.54
PPP4R1-226ENST00000583903 PZPP20742 1482 aa11.69□□□□□ -0.54
PPP4R1-226ENST00000583903 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
PPP4R1-226ENST00000583903 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
PPP4R1-226ENST00000583903 INO80Q9ULG1 1556 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-226ENST00000583903 ZNF777Q9ULD5 760 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-226ENST00000583903 CDC42BPAQ5VT25 1732 aa11.66□□□□□ -0.54
PPP4R1-226ENST00000583903 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
PPP4R1-226ENST00000583903 KIAA1107Q9UPP5 1409 aa11.66□□□□□ -0.54
PPP4R1-226ENST00000583903 XIRP1Q702N8 1843 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-226ENST00000583903 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
PPP4R1-226ENST00000583903 ZC3H13Q5T200 1668 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-226ENST00000583903 ROBO1Q9Y6N7 1651 aa11.63□□□□□ -0.55
PPP4R1-226ENST00000583903 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-226ENST00000583903 KDM5DQ9BY66 1539 aa11.63□□□□□ -0.55
PPP4R1-226ENST00000583903 JCADQ9P266 1359 aa11.63□□□□□ -0.55
PPP4R1-226ENST00000583903 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
PPP4R1-226ENST00000583903 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
PPP4R1-226ENST00000583903 GPATCH8Q9UKJ3 1502 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-226ENST00000583903 DHX29Q7Z478 1369 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-226ENST00000583903 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
PPP4R1-226ENST00000583903 CDK12Q9NYV4 1490 aaPredicted RBP11.6□□□□□ -0.55
PPP4R1-226ENST00000583903 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
PPP4R1-226ENST00000583903 EEA1Q15075 1411 aa11.6□□□□□ -0.55
PPP4R1-226ENST00000583903 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
PPP4R1-226ENST00000583903 KIF3BO15066 747 aa11.59□□□□□ -0.55
PPP4R1-226ENST00000583903 RXRBP28702 533 aa11.59□□□□□ -0.55
PPP4R1-226ENST00000583903 LRP6O75581 1613 aa11.59□□□□□ -0.55
PPP4R1-226ENST00000583903 SCAF11Q99590 1463 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-226ENST00000583903 LRRC9Q6ZRR7 1453 aa11.57□□□□□ -0.56
PPP4R1-226ENST00000583903 LTKP29376 864 aa11.57□□□□□ -0.56
PPP4R1-226ENST00000583903 CFDP1Q9UEE9 299 aaPredicted RBP11.57□□□□□ -0.56
PPP4R1-226ENST00000583903 SPATA31A6Q5VVP1 1343 aa11.57□□□□□ -0.56
PPP4R1-226ENST00000583903 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
PPP4R1-226ENST00000583903 RTEL1-TNFRSF6BF6WH68 1400 aa11.56□□□□□ -0.56
PPP4R1-226ENST00000583903 MAP3K1Q13233 1512 aa11.55□□□□□ -0.56
PPP4R1-226ENST00000583903 PHLPP1O60346 1717 aa11.55□□□□□ -0.56
PPP4R1-226ENST00000583903 MEX3CQ5U5Q3 659 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-226ENST00000583903 TXNDC2Q86VQ3 553 aa11.55□□□□□ -0.56
PPP4R1-226ENST00000583903 SLAIN2Q9P270 581 aa11.54□□□□□ -0.56
PPP4R1-226ENST00000583903 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
PPP4R1-226ENST00000583903 ARHGAP23Q9P227 1491 aa11.54□□□□□ -0.56
PPP4R1-226ENST00000583903 COL16A1Q07092 1604 aaPredicted RBP11.53□□□□□ -0.56
PPP4R1-226ENST00000583903 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
PPP4R1-226ENST00000583903 CASKIN1Q8WXD9 1431 aa11.53□□□□□ -0.56
PPP4R1-226ENST00000583903 MBD5Q9P267 1494 aa11.53□□□□□ -0.56
PPP4R1-226ENST00000583903 KCNA6P17658 529 aa11.53□□□□□ -0.56
PPP4R1-226ENST00000583903 PROSER2Q86WR7 435 aaPredicted RBP11.53□□□□□ -0.56
PPP4R1-226ENST00000583903 SLIT1O75093 1534 aa11.53□□□□□ -0.56
PPP4R1-226ENST00000583903 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-226ENST00000583903 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
PPP4R1-226ENST00000583903 ZNF644Q9H582 1327 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-226ENST00000583903 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
PPP4R1-226ENST00000583903 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
PPP4R1-226ENST00000583903 SETBP1Q9Y6X0 1596 aa11.5□□□□□ -0.57
PPP4R1-226ENST00000583903 CCNB3Q8WWL7 1395 aa11.5□□□□□ -0.57
PPP4R1-226ENST00000583903 RGS12O14924 1447 aa11.5□□□□□ -0.57
PPP4R1-226ENST00000583903 PRDM15P57071 1507 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-226ENST00000583903 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-226ENST00000583903 EID1Q9Y6B2 187 aa11.49□□□□□ -0.57
PPP4R1-226ENST00000583903 MSH6P52701 1360 aa11.49□□□□□ -0.57
PPP4R1-226ENST00000583903 TIAM1Q13009 1591 aa11.47□□□□□ -0.57
PPP4R1-226ENST00000583903 ABCC3O15438 1527 aa11.47□□□□□ -0.57
PPP4R1-226ENST00000583903 AFF2P51816 1311 aa11.47□□□□□ -0.57
PPP4R1-226ENST00000583903 NKTRP30414 1462 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-226ENST00000583903 NUTM2BA6NNL0 878 aaPredicted RBP11.46□□□□□ -0.57
PPP4R1-226ENST00000583903 NUTM2EB1AL46 878 aaPredicted RBP11.46□□□□□ -0.57
PPP4R1-226ENST00000583903 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-226ENST00000583903 NUTM2DQ5VT03 806 aaPredicted RBP11.46□□□□□ -0.57
PPP4R1-226ENST00000583903 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.57
PPP4R1-226ENST00000583903 SHPRHQ149N8 1683 aa11.46□□□□□ -0.58
PPP4R1-226ENST00000583903 TMEM2Q9UHN6 1383 aa11.45□□□□□ -0.58
PPP4R1-226ENST00000583903 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
PPP4R1-226ENST00000583903 SLC26A8Q96RN1 970 aa11.44□□□□□ -0.58
PPP4R1-226ENST00000583903 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
PPP4R1-226ENST00000583903 TET3O43151 1660 aa11.43□□□□□ -0.58
PPP4R1-226ENST00000583903 AHDC1Q5TGY3 1603 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1-226ENST00000583903 NWD1Q149M9 1564 aa11.43□□□□□ -0.58
PPP4R1-226ENST00000583903 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-226ENST00000583903 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
PPP4R1-226ENST00000583903 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
PPP4R1-226ENST00000583903 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
PPP4R1-226ENST00000583903 DIP2AQ14689 1571 aa11.4□□□□□ -0.58
PPP4R1-226ENST00000583903 KDM5AP29375 1690 aaKnown RBP11.4□□□□□ -0.59
PPP4R1-226ENST00000583903 CFAP65Q6ZU64 1925 aaKnown RBP11.39□□□□□ -0.59
PPP4R1-226ENST00000583903 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
PPP4R1-226ENST00000583903 EP400Q96L91 3159 aa11.38□□□□□ -0.59
PPP4R1-226ENST00000583903 NGLY1Q96IV0 654 aa11.38□□□□□ -0.59
PPP4R1-226ENST00000583903 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
PPP4R1-226ENST00000583903 ARHGAP31Q2M1Z3 1444 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms