RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
NUP85-223ENST00000583877 ZNF335Q9H4Z2 1342 aaPredicted RBP14.22□□□□□ -0.13
NUP85-223ENST00000583877 TIAM1Q13009 1591 aa14.22□□□□□ -0.13
NUP85-223ENST00000583877 GGT6Q6P531 493 aa14.2□□□□□ -0.14
NUP85-223ENST00000583877 A2ML1A8K2U0 1454 aa14.19□□□□□ -0.14
NUP85-223ENST00000583877 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
NUP85-223ENST00000583877 MTUS2Q5JR59 1369 aa14.19□□□□□ -0.14
NUP85-223ENST00000583877 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
NUP85-223ENST00000583877 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
NUP85-223ENST00000583877 RTEL1-TNFRSF6BF6WH68 1400 aa14.17□□□□□ -0.14
NUP85-223ENST00000583877 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
NUP85-223ENST00000583877 FAM135AQ9P2D6 1515 aa14.16□□□□□ -0.14
NUP85-223ENST00000583877 NEURL4Q96JN8 1562 aa14.16□□□□□ -0.14
NUP85-223ENST00000583877 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
NUP85-223ENST00000583877 CPS1P31327 1500 aa14.14□□□□□ -0.15
NUP85-223ENST00000583877 KDM5DQ9BY66 1539 aa14.14□□□□□ -0.15
NUP85-223ENST00000583877 ZNF644Q9H582 1327 aaPredicted RBP14.14□□□□□ -0.15
NUP85-223ENST00000583877 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
NUP85-223ENST00000583877 CFAP65Q6ZU64 1925 aaKnown RBP14.13□□□□□ -0.15
NUP85-223ENST00000583877 PZPP20742 1482 aa14.12□□□□□ -0.15
NUP85-223ENST00000583877 DEPDC5O75140 1603 aa14.12□□□□□ -0.15
NUP85-223ENST00000583877 TNRQ92752 1358 aa14.11□□□□□ -0.15
NUP85-223ENST00000583877 CCDC141Q6ZP82 1450 aa14.11□□□□□ -0.15
NUP85-223ENST00000583877 SHANK2Q9UPX8 1470 aa14.11□□□□□ -0.15
NUP85-223ENST00000583877 MED1Q15648 1581 aaPredicted RBP14.1□□□□□ -0.15
NUP85-223ENST00000583877 CAMSAP2Q08AD1 1489 aa14.09□□□□□ -0.15
NUP85-223ENST00000583877 IQGAP1P46940 1657 aa14.09□□□□□ -0.15
NUP85-223ENST00000583877 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
NUP85-223ENST00000583877 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
NUP85-223ENST00000583877 VWDEQ8N2E2 1590 aa14.09□□□□□ -0.15
NUP85-223ENST00000583877 NLRP1Q9C000 1473 aa14.08□□□□□ -0.16
NUP85-223ENST00000583877 KIF3BO15066 747 aa14.08□□□□□ -0.16
NUP85-223ENST00000583877 TOM1O60784 492 aa14.08□□□□□ -0.16
NUP85-223ENST00000583877 FBXO31Q5XUX0 539 aaPredicted RBP14.08□□□□□ -0.16
NUP85-223ENST00000583877 UGGT1Q9NYU2 1555 aa14.08□□□□□ -0.16
NUP85-223ENST00000583877 STRCP1A6NGW2 1772 aa14.07□□□□□ -0.16
NUP85-223ENST00000583877 RSPH4AQ5TD94 716 aa14.07□□□□□ -0.16
NUP85-223ENST00000583877 RNF17Q9BXT8 1623 aaKnown RBP14.07□□□□□ -0.16
NUP85-223ENST00000583877 MED14O60244 1454 aa14.06□□□□□ -0.16
NUP85-223ENST00000583877 HSPA1LP34931 641 aa14.06□□□□□ -0.16
NUP85-223ENST00000583877 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
NUP85-223ENST00000583877 WASHC2CQ9Y4E1 1318 aa14.06□□□□□ -0.16
NUP85-223ENST00000583877 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
NUP85-223ENST00000583877 THEMISQ8N1K5 641 aaPredicted RBP14.05□□□□□ -0.16
NUP85-223ENST00000583877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP85-223ENST00000583877 MIA2Q96PC5 1412 aa14.05□□□□□ -0.16
NUP85-223ENST00000583877 ALKQ9UM73 1620 aa14.04□□□□□ -0.16
NUP85-223ENST00000583877 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
NUP85-223ENST00000583877 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
NUP85-223ENST00000583877 CEP152O94986 1710 aa14.04□□□□□ -0.16
NUP85-223ENST00000583877 NPHP4O75161 1426 aaPredicted RBP14.03□□□□□ -0.16
NUP85-223ENST00000583877 SYNMO15061 1565 aa14.03□□□□□ -0.16
NUP85-223ENST00000583877 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
NUP85-223ENST00000583877 UBR1Q8IWV7 1749 aa14.02□□□□□ -0.16
NUP85-223ENST00000583877 ABCC3O15438 1527 aa14□□□□□ -0.17
NUP85-223ENST00000583877 XIRP1Q702N8 1843 aaKnown RBP14□□□□□ -0.17
NUP85-223ENST00000583877 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
NUP85-223ENST00000583877 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
NUP85-223ENST00000583877 MROH1Q8NDA8 1641 aa13.99□□□□□ -0.17
NUP85-223ENST00000583877 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
NUP85-223ENST00000583877 ERVK-7P63135 1459 aa13.97□□□□□ -0.17
NUP85-223ENST00000583877 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
NUP85-223ENST00000583877 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
NUP85-223ENST00000583877 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
NUP85-223ENST00000583877 ZBTB22O15209 634 aa13.93□□□□□ -0.18
NUP85-223ENST00000583877 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
NUP85-223ENST00000583877 SCAF11Q99590 1463 aaKnown RBP13.92□□□□□ -0.18
NUP85-223ENST00000583877 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
NUP85-223ENST00000583877 SLIT1O75093 1534 aa13.91□□□□□ -0.18
NUP85-223ENST00000583877 ARHGAP23Q9P227 1491 aa13.91□□□□□ -0.18
NUP85-223ENST00000583877 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.18
NUP85-223ENST00000583877 PIK3C2BO00750 1634 aa13.9□□□□□ -0.19
NUP85-223ENST00000583877 MAP3K1Q13233 1512 aa13.9□□□□□ -0.19
NUP85-223ENST00000583877 ARHGAP31Q2M1Z3 1444 aa13.89□□□□□ -0.19
NUP85-223ENST00000583877 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
NUP85-223ENST00000583877 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
NUP85-223ENST00000583877 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
NUP85-223ENST00000583877 LTKP29376 864 aa13.85□□□□□ -0.19
NUP85-223ENST00000583877 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
NUP85-223ENST00000583877 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
NUP85-223ENST00000583877 EID1Q9Y6B2 187 aa13.83□□□□□ -0.2
NUP85-223ENST00000583877 MYO5BQ9ULV0 1848 aa13.83□□□□□ -0.2
NUP85-223ENST00000583877 KIF15Q9NS87 1388 aa13.83□□□□□ -0.2
NUP85-223ENST00000583877 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
NUP85-223ENST00000583877 KANK4Q5T7N3 995 aaPredicted RBP13.82□□□□□ -0.2
NUP85-223ENST00000583877 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
NUP85-223ENST00000583877 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
NUP85-223ENST00000583877 FAM135BQ49AJ0 1406 aa13.81□□□□□ -0.2
NUP85-223ENST00000583877 TET3O43151 1660 aa13.8□□□□□ -0.2
NUP85-223ENST00000583877 RGS17Q9UGC6 210 aaPredicted RBP13.8□□□□□ -0.2
NUP85-223ENST00000583877 ABCC5O15440 1437 aa13.8□□□□□ -0.2
NUP85-223ENST00000583877 LMTK2Q8IWU2 1503 aa13.8□□□□□ -0.2
NUP85-223ENST00000583877 CHD2O14647 1828 aaKnown RBP13.79□□□□□ -0.2
NUP85-223ENST00000583877 KANK1Q14678 1352 aa13.79□□□□□ -0.2
NUP85-223ENST00000583877 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
NUP85-223ENST00000583877 NWD1Q149M9 1564 aa13.78□□□□□ -0.2
NUP85-223ENST00000583877 DAPK1P53355 1430 aa13.77□□□□□ -0.21
NUP85-223ENST00000583877 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
NUP85-223ENST00000583877 PHLPP1O60346 1717 aa13.76□□□□□ -0.21
NUP85-223ENST00000583877 ADGRB3O60242 1522 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms