RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
MSI2-218ENST00000583821 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
MSI2-218ENST00000583821 SPAG9O60271 1321 aaKnown RBP13.08□□□□□ -0.32
MSI2-218ENST00000583821 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
MSI2-218ENST00000583821 ZNF142P52746 1687 aaPredicted RBP13.06□□□□□ -0.32
MSI2-218ENST00000583821 A2MP01023 1474 aa13.06□□□□□ -0.32
MSI2-218ENST00000583821 CFDP1Q9UEE9 299 aaPredicted RBP13.06□□□□□ -0.32
MSI2-218ENST00000583821 ZNF644Q9H582 1327 aaPredicted RBP13.06□□□□□ -0.32
MSI2-218ENST00000583821 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
MSI2-218ENST00000583821 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
MSI2-218ENST00000583821 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
MSI2-218ENST00000583821 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
MSI2-218ENST00000583821 CAMSAP1Q5T5Y3 1602 aa13.03□□□□□ -0.32
MSI2-218ENST00000583821 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
MSI2-218ENST00000583821 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
MSI2-218ENST00000583821 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
MSI2-218ENST00000583821 NCOA1Q15788 1441 aa13.02□□□□□ -0.33
MSI2-218ENST00000583821 NPATQ14207 1427 aa13.01□□□□□ -0.33
MSI2-218ENST00000583821 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
MSI2-218ENST00000583821 LTBP4Q8N2S1 1624 aa12.99□□□□□ -0.33
MSI2-218ENST00000583821 PTPRTO14522 1441 aa12.99□□□□□ -0.33
MSI2-218ENST00000583821 ZMYM3Q14202 1370 aa12.99□□□□□ -0.33
MSI2-218ENST00000583821 CCDC141Q6ZP82 1450 aa12.98□□□□□ -0.33
MSI2-218ENST00000583821 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
MSI2-218ENST00000583821 GGT6Q6P531 493 aa12.97□□□□□ -0.33
MSI2-218ENST00000583821 ARHGEF5Q12774 1597 aa12.97□□□□□ -0.33
MSI2-218ENST00000583821 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.33
MSI2-218ENST00000583821 RTEL1-TNFRSF6BF6WH68 1400 aa12.95□□□□□ -0.34
MSI2-218ENST00000583821 VPS8Q8N3P4 1428 aa12.95□□□□□ -0.34
MSI2-218ENST00000583821 KDM5DQ9BY66 1539 aa12.94□□□□□ -0.34
MSI2-218ENST00000583821 LRRC9Q6ZRR7 1453 aa12.94□□□□□ -0.34
MSI2-218ENST00000583821 LOC105371045A0A1W2PR82 267 aa12.94□□□□□ -0.34
MSI2-218ENST00000583821 DNMT1P26358 1616 aaKnown RBP12.94□□□□□ -0.34
MSI2-218ENST00000583821 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
MSI2-218ENST00000583821 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
MSI2-218ENST00000583821 RNF17Q9BXT8 1623 aaKnown RBP12.92□□□□□ -0.34
MSI2-218ENST00000583821 TCOF1Q13428 1488 aaKnown RBP12.91□□□□□ -0.34
MSI2-218ENST00000583821 CEP152O94986 1710 aa12.91□□□□□ -0.34
MSI2-218ENST00000583821 MAST1Q9Y2H9 1570 aa12.91□□□□□ -0.34
MSI2-218ENST00000583821 CROCC2H7BZ55 1655 aa12.91□□□□□ -0.34
MSI2-218ENST00000583821 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
MSI2-218ENST00000583821 PLA2R1Q13018 1463 aa12.91□□□□□ -0.34
MSI2-218ENST00000583821 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
MSI2-218ENST00000583821 FAM135AQ9P2D6 1515 aa12.89□□□□□ -0.35
MSI2-218ENST00000583821 MROH1Q8NDA8 1641 aa12.89□□□□□ -0.35
MSI2-218ENST00000583821 CFAP65Q6ZU64 1925 aaKnown RBP12.89□□□□□ -0.35
MSI2-218ENST00000583821 PZPP20742 1482 aa12.89□□□□□ -0.35
MSI2-218ENST00000583821 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
MSI2-218ENST00000583821 EIF2AK4Q9P2K8 1649 aaKnown RBP12.88□□□□□ -0.35
MSI2-218ENST00000583821 KIF3BO15066 747 aa12.88□□□□□ -0.35
MSI2-218ENST00000583821 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
MSI2-218ENST00000583821 ZNF335Q9H4Z2 1342 aaPredicted RBP12.88□□□□□ -0.35
MSI2-218ENST00000583821 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
MSI2-218ENST00000583821 KANK4Q5T7N3 995 aaPredicted RBP12.87□□□□□ -0.35
MSI2-218ENST00000583821 FBXO31Q5XUX0 539 aaPredicted RBP12.87□□□□□ -0.35
MSI2-218ENST00000583821 ABCC3O15438 1527 aa12.87□□□□□ -0.35
MSI2-218ENST00000583821 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
MSI2-218ENST00000583821 TNRQ92752 1358 aa12.86□□□□□ -0.35
MSI2-218ENST00000583821 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
MSI2-218ENST00000583821 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
MSI2-218ENST00000583821 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
MSI2-218ENST00000583821 WASHC2CQ9Y4E1 1318 aa12.83□□□□□ -0.36
MSI2-218ENST00000583821 PKD2Q13563 968 aa12.82□□□□□ -0.36
MSI2-218ENST00000583821 UGGT1Q9NYU2 1555 aa12.81□□□□□ -0.36
MSI2-218ENST00000583821 STRCP1A6NGW2 1772 aa12.81□□□□□ -0.36
MSI2-218ENST00000583821 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
MSI2-218ENST00000583821 UBR1Q8IWV7 1749 aa12.81□□□□□ -0.36
MSI2-218ENST00000583821 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
MSI2-218ENST00000583821 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
MSI2-218ENST00000583821 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
MSI2-218ENST00000583821 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
MSI2-218ENST00000583821 NLRP1Q9C000 1473 aa12.8□□□□□ -0.36
MSI2-218ENST00000583821 DUOX2Q9NRD8 1548 aa12.8□□□□□ -0.36
MSI2-218ENST00000583821 TSPY4P0CV99 314 aa12.8□□□□□ -0.36
MSI2-218ENST00000583821 TSPY10P0CW01 314 aa12.8□□□□□ -0.36
MSI2-218ENST00000583821 RSPH4AQ5TD94 716 aa12.8□□□□□ -0.36
MSI2-218ENST00000583821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
MSI2-218ENST00000583821 ERVK-7P63135 1459 aa12.79□□□□□ -0.36
MSI2-218ENST00000583821 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
MSI2-218ENST00000583821 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
MSI2-218ENST00000583821 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.37
MSI2-218ENST00000583821 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
MSI2-218ENST00000583821 ABCC5O15440 1437 aa12.77□□□□□ -0.37
MSI2-218ENST00000583821 KIF15Q9NS87 1388 aa12.76□□□□□ -0.37
MSI2-218ENST00000583821 CPS1P31327 1500 aa12.76□□□□□ -0.37
MSI2-218ENST00000583821 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
MSI2-218ENST00000583821 NPHP4O75161 1426 aaPredicted RBP12.75□□□□□ -0.37
MSI2-218ENST00000583821 DAPK1P53355 1430 aa12.75□□□□□ -0.37
MSI2-218ENST00000583821 ALKQ9UM73 1620 aa12.74□□□□□ -0.37
MSI2-218ENST00000583821 MED14O60244 1454 aa12.74□□□□□ -0.37
MSI2-218ENST00000583821 FGD6Q6ZV73 1430 aa12.74□□□□□ -0.37
MSI2-218ENST00000583821 ERBINQ96RT1 1412 aa12.73□□□□□ -0.37
MSI2-218ENST00000583821 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
MSI2-218ENST00000583821 SYNMO15061 1565 aa12.72□□□□□ -0.37
MSI2-218ENST00000583821 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
MSI2-218ENST00000583821 THEMISQ8N1K5 641 aaPredicted RBP12.71□□□□□ -0.37
MSI2-218ENST00000583821 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.37
MSI2-218ENST00000583821 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
MSI2-218ENST00000583821 SLIT1O75093 1534 aa12.68□□□□□ -0.38
MSI2-218ENST00000583821 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms