RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 EEA1Q15075 1411 aa10.68□□□□□ -0.7
NUP85-221ENST00000583548 FAM135BQ49AJ0 1406 aa10.68□□□□□ -0.7
NUP85-221ENST00000583548 IQGAP1P46940 1657 aa10.68□□□□□ -0.7
NUP85-221ENST00000583548 SETD1AO15047 1707 aaKnown RBP10.67□□□□□ -0.7
NUP85-221ENST00000583548 UGGT1Q9NYU2 1555 aa10.67□□□□□ -0.7
NUP85-221ENST00000583548 PZPP20742 1482 aa10.67□□□□□ -0.7
NUP85-221ENST00000583548 PLEKHH2Q8IVE3 1493 aa10.66□□□□□ -0.7
NUP85-221ENST00000583548 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.7
NUP85-221ENST00000583548 SYCP2Q9BX26 1530 aa10.65□□□□□ -0.7
NUP85-221ENST00000583548 KIAA1107Q9UPP5 1409 aa10.65□□□□□ -0.7
NUP85-221ENST00000583548 ADGBQ8N7X0 1667 aa10.64□□□□□ -0.71
NUP85-221ENST00000583548 ZNF777Q9ULD5 760 aaPredicted RBP10.64□□□□□ -0.71
NUP85-221ENST00000583548 MIA2Q96PC5 1412 aa10.64□□□□□ -0.71
NUP85-221ENST00000583548 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
NUP85-221ENST00000583548 KDM5DQ9BY66 1539 aa10.63□□□□□ -0.71
NUP85-221ENST00000583548 CCDC18Q5T9S5 1454 aa10.62□□□□□ -0.71
NUP85-221ENST00000583548 CDC42BPAQ5VT25 1732 aa10.62□□□□□ -0.71
NUP85-221ENST00000583548 FOXD1Q16676 465 aa10.62□□□□□ -0.71
NUP85-221ENST00000583548 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
NUP85-221ENST00000583548 ZNF772Q68DY9 489 aaPredicted RBP10.62□□□□□ -0.71
NUP85-221ENST00000583548 HNRNPMP52272 730 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUP85-221ENST00000583548 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
NUP85-221ENST00000583548 JCADQ9P266 1359 aa10.6□□□□□ -0.71
NUP85-221ENST00000583548 WASHC2CQ9Y4E1 1318 aa10.59□□□□□ -0.71
NUP85-221ENST00000583548 ARHGAP35Q9NRY4 1499 aa10.58□□□□□ -0.72
NUP85-221ENST00000583548 CDK12Q9NYV4 1490 aaPredicted RBP10.58□□□□□ -0.72
NUP85-221ENST00000583548 DHX29Q7Z478 1369 aaKnown RBP10.58□□□□□ -0.72
NUP85-221ENST00000583548 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
NUP85-221ENST00000583548 RTEL1-TNFRSF6BF6WH68 1400 aa10.58□□□□□ -0.72
NUP85-221ENST00000583548 ZC3H13Q5T200 1668 aaKnown RBP10.57□□□□□ -0.72
NUP85-221ENST00000583548 ROBO1Q9Y6N7 1651 aa10.57□□□□□ -0.72
NUP85-221ENST00000583548 GPATCH8Q9UKJ3 1502 aaKnown RBP10.57□□□□□ -0.72
NUP85-221ENST00000583548 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
NUP85-221ENST00000583548 SCAF11Q99590 1463 aaKnown RBP10.56□□□□□ -0.72
NUP85-221ENST00000583548 KIF3BO15066 747 aa10.56□□□□□ -0.72
NUP85-221ENST00000583548 RXRBP28702 533 aa10.56□□□□□ -0.72
NUP85-221ENST00000583548 CFDP1Q9UEE9 299 aaPredicted RBP10.56□□□□□ -0.72
NUP85-221ENST00000583548 LRRIQ1Q96JM4 1722 aa10.55□□□□□ -0.72
NUP85-221ENST00000583548 MEX3CQ5U5Q3 659 aaKnown RBP10.55□□□□□ -0.72
NUP85-221ENST00000583548 FGD6Q6ZV73 1430 aa10.54□□□□□ -0.72
NUP85-221ENST00000583548 XIRP1Q702N8 1843 aaKnown RBP10.54□□□□□ -0.72
NUP85-221ENST00000583548 TMEM94Q12767 1356 aa10.53□□□□□ -0.72
NUP85-221ENST00000583548 CASKIN1Q8WXD9 1431 aa10.53□□□□□ -0.72
NUP85-221ENST00000583548 EID1Q9Y6B2 187 aa10.53□□□□□ -0.72
NUP85-221ENST00000583548 PHLPP1O60346 1717 aa10.53□□□□□ -0.72
NUP85-221ENST00000583548 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.72
NUP85-221ENST00000583548 UBTFP17480 764 aaKnown RBP10.52□□□□□ -0.73
NUP85-221ENST00000583548 TXNDC2Q86VQ3 553 aa10.52□□□□□ -0.73
NUP85-221ENST00000583548 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
NUP85-221ENST00000583548 MSH6P52701 1360 aa10.51□□□□□ -0.73
NUP85-221ENST00000583548 ARHGAP23Q9P227 1491 aa10.5□□□□□ -0.73
NUP85-221ENST00000583548 SLIT1O75093 1534 aa10.5□□□□□ -0.73
NUP85-221ENST00000583548 ABCC3O15438 1527 aa10.49□□□□□ -0.73
NUP85-221ENST00000583548 KCNA6P17658 529 aa10.49□□□□□ -0.73
NUP85-221ENST00000583548 PROSER2Q86WR7 435 aaPredicted RBP10.49□□□□□ -0.73
NUP85-221ENST00000583548 SLAIN2Q9P270 581 aa10.49□□□□□ -0.73
NUP85-221ENST00000583548 ERVK-7P63135 1459 aa10.49□□□□□ -0.73
NUP85-221ENST00000583548 MAP3K1Q13233 1512 aa10.48□□□□□ -0.73
NUP85-221ENST00000583548 LRP6O75581 1613 aa10.48□□□□□ -0.73
NUP85-221ENST00000583548 UBR1Q8IWV7 1749 aa10.48□□□□□ -0.73
NUP85-221ENST00000583548 NKTRP30414 1462 aaKnown RBP10.48□□□□□ -0.73
NUP85-221ENST00000583548 FYCO1Q9BQS8 1478 aa10.48□□□□□ -0.73
NUP85-221ENST00000583548 MBD5Q9P267 1494 aa10.48□□□□□ -0.73
NUP85-221ENST00000583548 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
NUP85-221ENST00000583548 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
NUP85-221ENST00000583548 LTKP29376 864 aa10.47□□□□□ -0.73
NUP85-221ENST00000583548 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
NUP85-221ENST00000583548 POTEDQ86YR6 584 aa10.47□□□□□ -0.73
NUP85-221ENST00000583548 TIAM1Q13009 1591 aa10.46□□□□□ -0.74
NUP85-221ENST00000583548 NCOA2Q15596 1464 aa10.45□□□□□ -0.74
NUP85-221ENST00000583548 SHPRHQ149N8 1683 aa10.44□□□□□ -0.74
NUP85-221ENST00000583548 CCDC141Q6ZP82 1450 aa10.44□□□□□ -0.74
NUP85-221ENST00000583548 ATAD2Q6PL18 1390 aa10.44□□□□□ -0.74
NUP85-221ENST00000583548 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
NUP85-221ENST00000583548 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
NUP85-221ENST00000583548 NUTM2DQ5VT03 806 aaPredicted RBP10.44□□□□□ -0.74
NUP85-221ENST00000583548 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
NUP85-221ENST00000583548 RBM6P78332 1123 aaKnown RBP10.43□□□□□ -0.74
NUP85-221ENST00000583548 CAMSAP2Q08AD1 1489 aa10.42□□□□□ -0.74
NUP85-221ENST00000583548 RGS12O14924 1447 aa10.42□□□□□ -0.74
NUP85-221ENST00000583548 MTUS2Q5JR59 1369 aa10.42□□□□□ -0.74
NUP85-221ENST00000583548 TMEM2Q9UHN6 1383 aa10.42□□□□□ -0.74
NUP85-221ENST00000583548 AFF2P51816 1311 aa10.42□□□□□ -0.74
NUP85-221ENST00000583548 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
NUP85-221ENST00000583548 NWD1Q149M9 1564 aa10.42□□□□□ -0.74
NUP85-221ENST00000583548 AHDC1Q5TGY3 1603 aaPredicted RBP10.41□□□□□ -0.74
NUP85-221ENST00000583548 ZNF644Q9H582 1327 aaPredicted RBP10.41□□□□□ -0.74
NUP85-221ENST00000583548 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
NUP85-221ENST00000583548 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
NUP85-221ENST00000583548 NCOA3Q9Y6Q9 1424 aa10.41□□□□□ -0.74
NUP85-221ENST00000583548 TSPY4P0CV99 314 aa10.4□□□□□ -0.74
NUP85-221ENST00000583548 TSPY10P0CW01 314 aa10.4□□□□□ -0.74
NUP85-221ENST00000583548 SRCAPQ6ZRS2 3230 aa10.39□□□□□ -0.75
NUP85-221ENST00000583548 KDM5AP29375 1690 aaKnown RBP10.39□□□□□ -0.75
NUP85-221ENST00000583548 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
NUP85-221ENST00000583548 QTRT2Q9H974 415 aaKnown RBP10.39□□□□□ -0.75
NUP85-221ENST00000583548 EIF2AK4Q9P2K8 1649 aaKnown RBP10.39□□□□□ -0.75
NUP85-221ENST00000583548 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
NUP85-221ENST00000583548 TET3O43151 1660 aa10.38□□□□□ -0.75
NUP85-221ENST00000583548 CADPS2Q86UW7 1296 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms