RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 PTPRMP28827 1452 aa37.09■■■■□ 3.53
MIR3960-201ENST00000583311 CNTLNQ9NXG0 1405 aa37.09■■■■□ 3.53
MIR3960-201ENST00000583311 RNF17Q9BXT8 1623 aaKnown RBP37.04■■■■□ 3.52
MIR3960-201ENST00000583311 FAM135AQ9P2D6 1515 aa37.03■■■■□ 3.52
MIR3960-201ENST00000583311 ANKRD50Q9ULJ7 1429 aa37.02■■■■□ 3.52
MIR3960-201ENST00000583311 MROH2AA6NES4 1674 aa36.96■■■■□ 3.51
MIR3960-201ENST00000583311 KDM5DQ9BY66 1539 aa36.95■■■■□ 3.51
MIR3960-201ENST00000583311 WASHC2CQ9Y4E1 1318 aa36.94■■■■□ 3.5
MIR3960-201ENST00000583311 CLTCQ00610 1675 aaKnown RBP36.94■■■■□ 3.5
MIR3960-201ENST00000583311 DEPDC5O75140 1603 aa36.91■■■■□ 3.5
MIR3960-201ENST00000583311 PRDM15P57071 1507 aaPredicted RBP36.9■■■■□ 3.5
MIR3960-201ENST00000583311 MROH1Q8NDA8 1641 aa36.9■■■■□ 3.5
MIR3960-201ENST00000583311 KANK1Q14678 1352 aa36.9■■■■□ 3.5
MIR3960-201ENST00000583311 PLPPR3Q6T4P5 718 aa36.89■■■■□ 3.5
MIR3960-201ENST00000583311 ZC3H13Q5T200 1668 aaKnown RBP36.89■■■■□ 3.5
MIR3960-201ENST00000583311 ZMYM3Q14202 1370 aa36.89■■■■□ 3.5
MIR3960-201ENST00000583311 C3P01024 1663 aa36.86■■■■□ 3.49
MIR3960-201ENST00000583311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.86■■■■□ 3.49
MIR3960-201ENST00000583311 HFM1A2PYH4 1435 aa36.85■■■■□ 3.49
MIR3960-201ENST00000583311 CEBPAP49715 358 aaPredicted RBP36.84■■■■□ 3.49
MIR3960-201ENST00000583311 NAIPQ13075 1403 aa36.84■■■■□ 3.49
MIR3960-201ENST00000583311 GCC2Q8IWJ2 1684 aa36.83■■■■□ 3.49
MIR3960-201ENST00000583311 ABCC3O15438 1527 aa36.83■■■■□ 3.49
MIR3960-201ENST00000583311 UNC13BO14795 1591 aa36.77■■■■□ 3.48
MIR3960-201ENST00000583311 CEP152O94986 1710 aa36.76■■■■□ 3.47
MIR3960-201ENST00000583311 VWDEQ8N2E2 1590 aa36.74■■■■□ 3.47
MIR3960-201ENST00000583311 NPATQ14207 1427 aa36.74■■■■□ 3.47
MIR3960-201ENST00000583311 PZPP20742 1482 aa36.73■■■■□ 3.47
MIR3960-201ENST00000583311 LMTK2Q8IWU2 1503 aa36.72■■■■□ 3.47
MIR3960-201ENST00000583311 CAMSAP1Q5T5Y3 1602 aa36.71■■■■□ 3.47
MIR3960-201ENST00000583311 ARHGAP31Q2M1Z3 1444 aa36.67■■■■□ 3.46
MIR3960-201ENST00000583311 SETD1BQ9UPS6 1966 aaKnown RBP36.66■■■■□ 3.46
MIR3960-201ENST00000583311 NUP155O75694 1391 aa36.65■■■■□ 3.46
MIR3960-201ENST00000583311 PREX1Q8TCU6 1659 aa36.64■■■■□ 3.46
MIR3960-201ENST00000583311 IQGAP3Q86VI3 1631 aa36.63■■■■□ 3.45
MIR3960-201ENST00000583311 UHRF1BP1Q6BDS2 1440 aa36.61■■■■□ 3.45
MIR3960-201ENST00000583311 ACIN1Q9UKV3 1341 aaKnown RBP36.59■■■■□ 3.45
MIR3960-201ENST00000583311 EFCAB6Q5THR3 1501 aa36.59■■■■□ 3.45
MIR3960-201ENST00000583311 SETD5Q9C0A6 1442 aa36.59■■■■□ 3.45
MIR3960-201ENST00000583311 TET3O43151 1660 aa36.58■■■■□ 3.45
MIR3960-201ENST00000583311 FBXO31Q5XUX0 539 aaPredicted RBP36.58■■■■□ 3.45
MIR3960-201ENST00000583311 TNRQ92752 1358 aa36.56■■■■□ 3.44
MIR3960-201ENST00000583311 LMTK3Q96Q04 1460 aa36.55■■■■□ 3.44
MIR3960-201ENST00000583311 SPATA31D1Q6ZQQ2 1576 aa36.54■■■■□ 3.44
MIR3960-201ENST00000583311 ERVK-7P63135 1459 aa36.54■■■■□ 3.44
MIR3960-201ENST00000583311 RPRD2Q5VT52 1461 aaKnown RBP36.54■■■■□ 3.44
MIR3960-201ENST00000583311 TRIM52Q96A61 297 aa36.53■■■■□ 3.44
MIR3960-201ENST00000583311 MYO3AQ8NEV4 1616 aa36.5■■■■□ 3.43
MIR3960-201ENST00000583311 NLRP1Q9C000 1473 aa36.45■■■■□ 3.43
MIR3960-201ENST00000583311 RAB3GAP2Q9H2M9 1393 aa36.44■■■■□ 3.42
MIR3960-201ENST00000583311 TRIM26Q12899 539 aaPredicted RBP36.44■■■■□ 3.42
MIR3960-201ENST00000583311 CFAP65Q6ZU64 1925 aaKnown RBP36.44■■■■□ 3.42
MIR3960-201ENST00000583311 ZNF142P52746 1687 aaPredicted RBP36.42■■■■□ 3.42
MIR3960-201ENST00000583311 CEP170BQ9Y4F5 1589 aaPredicted RBP36.42■■■■□ 3.42
MIR3960-201ENST00000583311 E9PCH4 1651 aa36.42■■■■□ 3.42
MIR3960-201ENST00000583311 A2ML1A8K2U0 1454 aa36.41■■■■□ 3.42
MIR3960-201ENST00000583311 NOS1P29475 1434 aa36.4■■■■□ 3.42
MIR3960-201ENST00000583311 HRCP23327 699 aa36.37■■■■□ 3.41
MIR3960-201ENST00000583311 SLC4A1APQ9BWU0 796 aaKnown RBP36.37■■■■□ 3.41
MIR3960-201ENST00000583311 HSPA2P54652 639 aa36.35■■■■□ 3.41
MIR3960-201ENST00000583311 SLC52A1Q9NWF4 448 aa36.32■■■■□ 3.4
MIR3960-201ENST00000583311 SYNMO15061 1565 aa36.32■■■■□ 3.4
MIR3960-201ENST00000583311 UGGT1Q9NYU2 1555 aa36.29■■■■□ 3.4
MIR3960-201ENST00000583311 PKD2Q13563 968 aa36.29■■■■□ 3.4
MIR3960-201ENST00000583311 THEMISQ8N1K5 641 aaPredicted RBP36.26■■■■□ 3.4
MIR3960-201ENST00000583311 MPHOSPH9Q99550 1183 aa36.26■■■■□ 3.4
MIR3960-201ENST00000583311 SPHKAPQ2M3C7 1700 aa36.23■■■■□ 3.39
MIR3960-201ENST00000583311 IDI1Q13907 227 aa36.23■■■■□ 3.39
MIR3960-201ENST00000583311 PTPRTO14522 1441 aa36.23■■■■□ 3.39
MIR3960-201ENST00000583311 STAG3Q9UJ98 1225 aa36.22■■■■□ 3.39
MIR3960-201ENST00000583311 PLA2R1Q13018 1463 aa36.22■■■■□ 3.39
MIR3960-201ENST00000583311 PIK3C2BO00750 1634 aa36.2■■■■□ 3.39
MIR3960-201ENST00000583311 KDM5AP29375 1690 aaKnown RBP36.19■■■■□ 3.38
MIR3960-201ENST00000583311 UBR1Q8IWV7 1749 aa36.18■■■■□ 3.38
MIR3960-201ENST00000583311 TRPM2O94759 1503 aa36.16■■■■□ 3.38
MIR3960-201ENST00000583311 ADGRB3O60242 1522 aa36.14■■■■□ 3.38
MIR3960-201ENST00000583311 DMRT2Q9Y5R5 561 aa36.11■■■■□ 3.37
MIR3960-201ENST00000583311 STRCQ7RTU9 1775 aa36.09■■■■□ 3.37
MIR3960-201ENST00000583311 FOXD1Q16676 465 aa36.08■■■■□ 3.37
MIR3960-201ENST00000583311 ANKLE2Q86XL3 938 aa36.08■■■■□ 3.37
MIR3960-201ENST00000583311 CHGAP10645 457 aaKnown RBP36.06■■■■□ 3.36
MIR3960-201ENST00000583311 SLIT1O75093 1534 aa36.05■■■■□ 3.36
MIR3960-201ENST00000583311 TMEM131LA2VDJ0 1609 aa36.04■■■■□ 3.36
MIR3960-201ENST00000583311 NCKAP5LQ9HCH0 1330 aa36.04■■■■□ 3.36
MIR3960-201ENST00000583311 CLTCL1P53675 1640 aa36.03■■■■□ 3.36
MIR3960-201ENST00000583311 POLR1AO95602 1720 aaPredicted RBP36.03■■■■□ 3.36
MIR3960-201ENST00000583311 TMEM2Q9UHN6 1383 aa36.02■■■■□ 3.36
MIR3960-201ENST00000583311 EID1Q9Y6B2 187 aa36.02■■■■□ 3.36
MIR3960-201ENST00000583311 ARHGAP23Q9P227 1491 aa36.02■■■■□ 3.36
MIR3960-201ENST00000583311 CCDC144AA2RUR9 1427 aa35.99■■■■□ 3.35
MIR3960-201ENST00000583311 HDGFP51858 240 aaKnown RBP35.98■■■■□ 3.35
MIR3960-201ENST00000583311 TXNDC2Q86VQ3 553 aa35.96■■■■□ 3.35
MIR3960-201ENST00000583311 SCAF11Q99590 1463 aaKnown RBP35.96■■■■□ 3.35
MIR3960-201ENST00000583311 KIF1BO60333 1816 aa35.95■■■■□ 3.35
MIR3960-201ENST00000583311 MYO5BQ9ULV0 1848 aa35.94■■■■□ 3.34
MIR3960-201ENST00000583311 MED14O60244 1454 aa35.92■■■■□ 3.34
MIR3960-201ENST00000583311 NEURL4Q96JN8 1562 aa35.92■■■■□ 3.34
MIR3960-201ENST00000583311 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.9■■■■□ 3.34
MIR3960-201ENST00000583311 RIMS2Q9UQ26 1411 aa35.9■■■■□ 3.34
MIR3960-201ENST00000583311 LTKP29376 864 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms