RNA–Protein interactions for RNA: ENST00000582967.1

RHBDL3-206, Transcript of rhomboid like 3, humanhuman

TSL 3

Gene RHBDL3, Length 1,246 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-206ENST00000582967 ROCK1Q13464 1354 aa24.11■■□□□ 1.45
RHBDL3-206ENST00000582967 ERBINQ96RT1 1412 aa24.1■■□□□ 1.45
RHBDL3-206ENST00000582967 EIF2AK4Q9P2K8 1649 aaKnown RBP24.08■■□□□ 1.45
RHBDL3-206ENST00000582967 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
RHBDL3-206ENST00000582967 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
RHBDL3-206ENST00000582967 CEBPAP49715 358 aaPredicted RBP24.04■■□□□ 1.44
RHBDL3-206ENST00000582967 FAM135AQ9P2D6 1515 aa24.04■■□□□ 1.44
RHBDL3-206ENST00000582967 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
RHBDL3-206ENST00000582967 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
RHBDL3-206ENST00000582967 RNF17Q9BXT8 1623 aaKnown RBP24.02■■□□□ 1.44
RHBDL3-206ENST00000582967 MROH2AA6NES4 1674 aa24■■□□□ 1.43
RHBDL3-206ENST00000582967 KDM5DQ9BY66 1539 aa23.99■■□□□ 1.43
RHBDL3-206ENST00000582967 CLTCQ00610 1675 aaKnown RBP23.99■■□□□ 1.43
RHBDL3-206ENST00000582967 KANK1Q14678 1352 aa23.97■■□□□ 1.43
RHBDL3-206ENST00000582967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.97■■□□□ 1.43
RHBDL3-206ENST00000582967 SETD1BQ9UPS6 1966 aaKnown RBP23.96■■□□□ 1.43
RHBDL3-206ENST00000582967 C3P01024 1663 aa23.95■■□□□ 1.43
RHBDL3-206ENST00000582967 MROH1Q8NDA8 1641 aa23.94■■□□□ 1.42
RHBDL3-206ENST00000582967 PRDM15P57071 1507 aaPredicted RBP23.93■■□□□ 1.42
RHBDL3-206ENST00000582967 NPATQ14207 1427 aa23.93■■□□□ 1.42
RHBDL3-206ENST00000582967 DEPDC5O75140 1603 aa23.92■■□□□ 1.42
RHBDL3-206ENST00000582967 ABCC3O15438 1527 aa23.91■■□□□ 1.42
RHBDL3-206ENST00000582967 ZC3H13Q5T200 1668 aaKnown RBP23.9■■□□□ 1.42
RHBDL3-206ENST00000582967 NAIPQ13075 1403 aa23.88■■□□□ 1.41
RHBDL3-206ENST00000582967 PZPP20742 1482 aa23.87■■□□□ 1.41
RHBDL3-206ENST00000582967 HFM1A2PYH4 1435 aa23.87■■□□□ 1.41
RHBDL3-206ENST00000582967 VWDEQ8N2E2 1590 aa23.85■■□□□ 1.41
RHBDL3-206ENST00000582967 UHRF1BP1Q6BDS2 1440 aa23.84■■□□□ 1.41
RHBDL3-206ENST00000582967 FBXO31Q5XUX0 539 aaPredicted RBP23.84■■□□□ 1.41
RHBDL3-206ENST00000582967 LMTK2Q8IWU2 1503 aa23.84■■□□□ 1.41
RHBDL3-206ENST00000582967 ARHGAP31Q2M1Z3 1444 aa23.84■■□□□ 1.41
RHBDL3-206ENST00000582967 CEP152O94986 1710 aa23.83■■□□□ 1.41
RHBDL3-206ENST00000582967 LMTK3Q96Q04 1460 aa23.82■■□□□ 1.4
RHBDL3-206ENST00000582967 PREX1Q8TCU6 1659 aa23.81■■□□□ 1.4
RHBDL3-206ENST00000582967 UNC13BO14795 1591 aa23.81■■□□□ 1.4
RHBDL3-206ENST00000582967 NUP155O75694 1391 aa23.8■■□□□ 1.4
RHBDL3-206ENST00000582967 GCC2Q8IWJ2 1684 aa23.8■■□□□ 1.4
RHBDL3-206ENST00000582967 CAMSAP1Q5T5Y3 1602 aa23.8■■□□□ 1.4
RHBDL3-206ENST00000582967 TNRQ92752 1358 aa23.79■■□□□ 1.4
RHBDL3-206ENST00000582967 ACIN1Q9UKV3 1341 aaKnown RBP23.75■■□□□ 1.39
RHBDL3-206ENST00000582967 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
RHBDL3-206ENST00000582967 HSPA2P54652 639 aa23.74■■□□□ 1.39
RHBDL3-206ENST00000582967 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
RHBDL3-206ENST00000582967 CFAP65Q6ZU64 1925 aaKnown RBP23.73■■□□□ 1.39
RHBDL3-206ENST00000582967 FBXO41Q8TF61 875 aa23.73■■□□□ 1.39
RHBDL3-206ENST00000582967 EFCAB6Q5THR3 1501 aa23.73■■□□□ 1.39
RHBDL3-206ENST00000582967 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
RHBDL3-206ENST00000582967 IQGAP3Q86VI3 1631 aa23.72■■□□□ 1.39
RHBDL3-206ENST00000582967 TET3O43151 1660 aa23.71■■□□□ 1.39
RHBDL3-206ENST00000582967 RPRD2Q5VT52 1461 aaKnown RBP23.71■■□□□ 1.39
RHBDL3-206ENST00000582967 NLRP1Q9C000 1473 aa23.71■■□□□ 1.39
RHBDL3-206ENST00000582967 SETD5Q9C0A6 1442 aa23.7■■□□□ 1.38
RHBDL3-206ENST00000582967 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.38
RHBDL3-206ENST00000582967 A2ML1A8K2U0 1454 aa23.69■■□□□ 1.38
RHBDL3-206ENST00000582967 CEP170BQ9Y4F5 1589 aaPredicted RBP23.66■■□□□ 1.38
RHBDL3-206ENST00000582967 NOS1P29475 1434 aa23.66■■□□□ 1.38
RHBDL3-206ENST00000582967 ZNF142P52746 1687 aaPredicted RBP23.65■■□□□ 1.38
RHBDL3-206ENST00000582967 THEMISQ8N1K5 641 aaPredicted RBP23.65■■□□□ 1.38
RHBDL3-206ENST00000582967 SLC52A1Q9NWF4 448 aa23.64■■□□□ 1.37
RHBDL3-206ENST00000582967 SLC4A1APQ9BWU0 796 aaKnown RBP23.62■■□□□ 1.37
RHBDL3-206ENST00000582967 HRCP23327 699 aa23.61■■□□□ 1.37
RHBDL3-206ENST00000582967 IDI1Q13907 227 aa23.61■■□□□ 1.37
RHBDL3-206ENST00000582967 E9PCH4 1651 aa23.6■■□□□ 1.37
RHBDL3-206ENST00000582967 RAB3GAP2Q9H2M9 1393 aa23.6■■□□□ 1.37
RHBDL3-206ENST00000582967 DMRT2Q9Y5R5 561 aa23.59■■□□□ 1.37
RHBDL3-206ENST00000582967 UGGT1Q9NYU2 1555 aa23.59■■□□□ 1.37
RHBDL3-206ENST00000582967 PKD2Q13563 968 aa23.58■■□□□ 1.37
RHBDL3-206ENST00000582967 STAG3Q9UJ98 1225 aa23.58■■□□□ 1.37
RHBDL3-206ENST00000582967 PLA2R1Q13018 1463 aa23.57■■□□□ 1.36
RHBDL3-206ENST00000582967 SYNMO15061 1565 aa23.57■■□□□ 1.36
RHBDL3-206ENST00000582967 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
RHBDL3-206ENST00000582967 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
RHBDL3-206ENST00000582967 PTPRTO14522 1441 aa23.53■■□□□ 1.36
RHBDL3-206ENST00000582967 ANKLE2Q86XL3 938 aa23.53■■□□□ 1.36
RHBDL3-206ENST00000582967 NCKAP5LQ9HCH0 1330 aa23.52■■□□□ 1.36
RHBDL3-206ENST00000582967 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
RHBDL3-206ENST00000582967 PIK3C2BO00750 1634 aa23.5■■□□□ 1.35
RHBDL3-206ENST00000582967 UBR1Q8IWV7 1749 aa23.49■■□□□ 1.35
RHBDL3-206ENST00000582967 KDM5AP29375 1690 aaKnown RBP23.48■■□□□ 1.35
RHBDL3-206ENST00000582967 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
RHBDL3-206ENST00000582967 SPHKAPQ2M3C7 1700 aa23.46■■□□□ 1.35
RHBDL3-206ENST00000582967 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
RHBDL3-206ENST00000582967 TMEM2Q9UHN6 1383 aa23.45■■□□□ 1.34
RHBDL3-206ENST00000582967 ADGRB3O60242 1522 aa23.44■■□□□ 1.34
RHBDL3-206ENST00000582967 TXNDC2Q86VQ3 553 aa23.44■■□□□ 1.34
RHBDL3-206ENST00000582967 SLIT1O75093 1534 aa23.43■■□□□ 1.34
RHBDL3-206ENST00000582967 ARHGAP23Q9P227 1491 aa23.43■■□□□ 1.34
RHBDL3-206ENST00000582967 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
RHBDL3-206ENST00000582967 FOXD1Q16676 465 aa23.43■■□□□ 1.34
RHBDL3-206ENST00000582967 TRPM2O94759 1503 aa23.43■■□□□ 1.34
RHBDL3-206ENST00000582967 LTKP29376 864 aa23.4■■□□□ 1.34
RHBDL3-206ENST00000582967 TMEM131LA2VDJ0 1609 aa23.4■■□□□ 1.34
RHBDL3-206ENST00000582967 MED14O60244 1454 aa23.39■■□□□ 1.34
RHBDL3-206ENST00000582967 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.34
RHBDL3-206ENST00000582967 POLR1AO95602 1720 aaPredicted RBP23.39■■□□□ 1.33
RHBDL3-206ENST00000582967 NPHP4O75161 1426 aaPredicted RBP23.37■■□□□ 1.33
RHBDL3-206ENST00000582967 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.37■■□□□ 1.33
RHBDL3-206ENST00000582967 NEURL4Q96JN8 1562 aa23.35■■□□□ 1.33
RHBDL3-206ENST00000582967 CLTCL1P53675 1640 aa23.35■■□□□ 1.33
RHBDL3-206ENST00000582967 RIMS2Q9UQ26 1411 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms