RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 DUOX2Q9NRD8 1548 aa29.07■■■□□ 2.24
LIMS2-218ENST00000582671 KDM5DQ9BY66 1539 aa29.06■■■□□ 2.24
LIMS2-218ENST00000582671 STRCQ7RTU9 1775 aa29.06■■■□□ 2.24
LIMS2-218ENST00000582671 PTPRKQ15262 1439 aa29.05■■■□□ 2.24
LIMS2-218ENST00000582671 MROH1Q8NDA8 1641 aa29.04■■■□□ 2.24
LIMS2-218ENST00000582671 FAM135AQ9P2D6 1515 aa29.04■■■□□ 2.24
LIMS2-218ENST00000582671 MYO3AQ8NEV4 1616 aa29.02■■■□□ 2.24
LIMS2-218ENST00000582671 PPARGC1BQ86YN6 1023 aaKnown RBP29.02■■■□□ 2.24
LIMS2-218ENST00000582671 KIF15Q9NS87 1388 aa29.01■■■□□ 2.23
LIMS2-218ENST00000582671 FAM50AQ14320 339 aaKnown RBP29■■■□□ 2.23
LIMS2-218ENST00000582671 RRP7BPQ9NSQ0 103 aa29■■■□□ 2.23
LIMS2-218ENST00000582671 CEP152O94986 1710 aa28.99■■■□□ 2.23
LIMS2-218ENST00000582671 ZC3H13Q5T200 1668 aaKnown RBP28.99■■■□□ 2.23
LIMS2-218ENST00000582671 WASHC2CQ9Y4E1 1318 aa28.98■■■□□ 2.23
LIMS2-218ENST00000582671 CHIC2Q9UKJ5 165 aa28.98■■■□□ 2.23
LIMS2-218ENST00000582671 ZNF142P52746 1687 aaPredicted RBP28.98■■■□□ 2.23
LIMS2-218ENST00000582671 ERBINQ96RT1 1412 aa28.95■■■□□ 2.23
LIMS2-218ENST00000582671 ABCC3O15438 1527 aa28.95■■■□□ 2.23
LIMS2-218ENST00000582671 PZPP20742 1482 aa28.94■■■□□ 2.22
LIMS2-218ENST00000582671 ANKRD30AQ9BXX3 1397 aa28.93■■■□□ 2.22
LIMS2-218ENST00000582671 DEPDC5O75140 1603 aa28.93■■■□□ 2.22
LIMS2-218ENST00000582671 NCOA1Q15788 1441 aa28.93■■■□□ 2.22
LIMS2-218ENST00000582671 ADGRL2O95490 1459 aa28.92■■■□□ 2.22
LIMS2-218ENST00000582671 FBXO31Q5XUX0 539 aaPredicted RBP28.92■■■□□ 2.22
LIMS2-218ENST00000582671 CFAP65Q6ZU64 1925 aaKnown RBP28.92■■■□□ 2.22
LIMS2-218ENST00000582671 CEP170BQ9Y4F5 1589 aaPredicted RBP28.92■■■□□ 2.22
LIMS2-218ENST00000582671 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
LIMS2-218ENST00000582671 PRDM15P57071 1507 aaPredicted RBP28.9■■■□□ 2.22
LIMS2-218ENST00000582671 TNRQ92752 1358 aa28.84■■■□□ 2.21
LIMS2-218ENST00000582671 A2ML1A8K2U0 1454 aa28.82■■■□□ 2.2
LIMS2-218ENST00000582671 SPATA31D1Q6ZQQ2 1576 aa28.8■■■□□ 2.2
LIMS2-218ENST00000582671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.79■■■□□ 2.2
LIMS2-218ENST00000582671 VWDEQ8N2E2 1590 aa28.78■■■□□ 2.2
LIMS2-218ENST00000582671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.76■■■□□ 2.2
LIMS2-218ENST00000582671 DMRT2Q9Y5R5 561 aa28.76■■■□□ 2.19
LIMS2-218ENST00000582671 ERVK-7P63135 1459 aa28.76■■■□□ 2.19
LIMS2-218ENST00000582671 PLA2R1Q13018 1463 aa28.75■■■□□ 2.19
LIMS2-218ENST00000582671 PTPRTO14522 1441 aa28.75■■■□□ 2.19
LIMS2-218ENST00000582671 ANKRD50Q9ULJ7 1429 aa28.75■■■□□ 2.19
LIMS2-218ENST00000582671 ILDR1Q86SU0 546 aaPredicted RBP28.74■■■□□ 2.19
LIMS2-218ENST00000582671 NCKAP5LQ9HCH0 1330 aa28.73■■■□□ 2.19
LIMS2-218ENST00000582671 NLRP1Q9C000 1473 aa28.72■■■□□ 2.19
LIMS2-218ENST00000582671 ARHGAP31Q2M1Z3 1444 aa28.72■■■□□ 2.19
LIMS2-218ENST00000582671 LMTK2Q8IWU2 1503 aa28.72■■■□□ 2.19
LIMS2-218ENST00000582671 ITGAEP38570 1179 aa28.71■■■□□ 2.19
LIMS2-218ENST00000582671 ROCK1Q13464 1354 aa28.71■■■□□ 2.19
LIMS2-218ENST00000582671 KANK1Q14678 1352 aa28.71■■■□□ 2.19
LIMS2-218ENST00000582671 POLR1AO95602 1720 aaPredicted RBP28.71■■■□□ 2.19
LIMS2-218ENST00000582671 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
LIMS2-218ENST00000582671 UNC13BO14795 1591 aa28.67■■■□□ 2.18
LIMS2-218ENST00000582671 UGGT1Q9NYU2 1555 aa28.67■■■□□ 2.18
LIMS2-218ENST00000582671 UBR1Q8IWV7 1749 aa28.65■■■□□ 2.18
LIMS2-218ENST00000582671 EFCAB6Q5THR3 1501 aa28.64■■■□□ 2.18
LIMS2-218ENST00000582671 PKD2Q13563 968 aa28.63■■■□□ 2.17
LIMS2-218ENST00000582671 NEURL4Q96JN8 1562 aa28.62■■■□□ 2.17
LIMS2-218ENST00000582671 TET3O43151 1660 aa28.61■■■□□ 2.17
LIMS2-218ENST00000582671 GCC2Q8IWJ2 1684 aa28.61■■■□□ 2.17
LIMS2-218ENST00000582671 LTBP4Q8N2S1 1624 aa28.59■■■□□ 2.17
LIMS2-218ENST00000582671 CERKQ8TCT0 537 aa28.59■■■□□ 2.17
LIMS2-218ENST00000582671 PIK3C2BO00750 1634 aa28.58■■■□□ 2.17
LIMS2-218ENST00000582671 THEMISQ8N1K5 641 aaPredicted RBP28.58■■■□□ 2.17
LIMS2-218ENST00000582671 SYNMO15061 1565 aa28.58■■■□□ 2.17
LIMS2-218ENST00000582671 FBXO41Q8TF61 875 aa28.56■■■□□ 2.16
LIMS2-218ENST00000582671 IQGAP3Q86VI3 1631 aa28.55■■■□□ 2.16
LIMS2-218ENST00000582671 E9PCH4 1651 aa28.54■■■□□ 2.16
LIMS2-218ENST00000582671 NOS1P29475 1434 aa28.53■■■□□ 2.16
LIMS2-218ENST00000582671 ANKLE2Q86XL3 938 aa28.51■■■□□ 2.15
LIMS2-218ENST00000582671 RPRD2Q5VT52 1461 aaKnown RBP28.5■■■□□ 2.15
LIMS2-218ENST00000582671 KDM5AP29375 1690 aaKnown RBP28.5■■■□□ 2.15
LIMS2-218ENST00000582671 IQGAP1P46940 1657 aa28.48■■■□□ 2.15
LIMS2-218ENST00000582671 ZNF335Q9H4Z2 1342 aaPredicted RBP28.48■■■□□ 2.15
LIMS2-218ENST00000582671 MED14O60244 1454 aa28.48■■■□□ 2.15
LIMS2-218ENST00000582671 MYO5BQ9ULV0 1848 aa28.46■■■□□ 2.15
LIMS2-218ENST00000582671 IDI1Q13907 227 aa28.46■■■□□ 2.15
LIMS2-218ENST00000582671 ARHGAP23Q9P227 1491 aa28.46■■■□□ 2.15
LIMS2-218ENST00000582671 SLIT1O75093 1534 aa28.45■■■□□ 2.15
LIMS2-218ENST00000582671 NPHP4O75161 1426 aaPredicted RBP28.44■■■□□ 2.14
LIMS2-218ENST00000582671 NAIPQ13075 1403 aa28.44■■■□□ 2.14
LIMS2-218ENST00000582671 NUP155O75694 1391 aa28.44■■■□□ 2.14
LIMS2-218ENST00000582671 ADGRB3O60242 1522 aa28.4■■■□□ 2.14
LIMS2-218ENST00000582671 SCAF11Q99590 1463 aaKnown RBP28.39■■■□□ 2.13
LIMS2-218ENST00000582671 LTKP29376 864 aa28.38■■■□□ 2.13
LIMS2-218ENST00000582671 SLC52A1Q9NWF4 448 aa28.37■■■□□ 2.13
LIMS2-218ENST00000582671 STAG3Q9UJ98 1225 aa28.37■■■□□ 2.13
LIMS2-218ENST00000582671 TMEM2Q9UHN6 1383 aa28.37■■■□□ 2.13
LIMS2-218ENST00000582671 STRCP1A6NGW2 1772 aa28.36■■■□□ 2.13
LIMS2-218ENST00000582671 HFM1A2PYH4 1435 aa28.35■■■□□ 2.13
LIMS2-218ENST00000582671 IQSEC2Q5JU85 1478 aa28.35■■■□□ 2.13
LIMS2-218ENST00000582671 TXNDC2Q86VQ3 553 aa28.35■■■□□ 2.13
LIMS2-218ENST00000582671 TMEM131LA2VDJ0 1609 aa28.34■■■□□ 2.13
LIMS2-218ENST00000582671 SPHKAPQ2M3C7 1700 aa28.33■■■□□ 2.13
LIMS2-218ENST00000582671 EID1Q9Y6B2 187 aa28.28■■■□□ 2.12
LIMS2-218ENST00000582671 CPS1P31327 1500 aa28.28■■■□□ 2.12
LIMS2-218ENST00000582671 ZFYVE9O95405 1425 aa28.22■■■□□ 2.11
LIMS2-218ENST00000582671 CHGAP10645 457 aaKnown RBP28.19■■■□□ 2.1
LIMS2-218ENST00000582671 TRIM52Q96A61 297 aa28.19■■■□□ 2.1
LIMS2-218ENST00000582671 RIMS2Q9UQ26 1411 aa28.18■■■□□ 2.1
LIMS2-218ENST00000582671 CLTCL1P53675 1640 aa28.17■■■□□ 2.1
LIMS2-218ENST00000582671 XIRP1Q702N8 1843 aaKnown RBP28.16■■■□□ 2.1
LIMS2-218ENST00000582671 TRPM2O94759 1503 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms