RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 ROCK1Q13464 1354 aa18.72■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 KIF3BO15066 747 aa18.7■□□□□ 0.58
CCDC144NL-AS1-216ENST00000582583 ERBINQ96RT1 1412 aa18.69■□□□□ 0.58
CCDC144NL-AS1-216ENST00000582583 EIF2AK4Q9P2K8 1649 aaKnown RBP18.69■□□□□ 0.58
CCDC144NL-AS1-216ENST00000582583 MADDQ8WXG6 1647 aa18.68■□□□□ 0.58
CCDC144NL-AS1-216ENST00000582583 GGT6Q6P531 493 aa18.67■□□□□ 0.58
CCDC144NL-AS1-216ENST00000582583 FER1L4A9Z1Z3 1794 aa18.66■□□□□ 0.58
CCDC144NL-AS1-216ENST00000582583 ANKRD50Q9ULJ7 1429 aa18.65■□□□□ 0.58
CCDC144NL-AS1-216ENST00000582583 RIMS1Q86UR5 1692 aaKnown RBP18.64■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 RNF17Q9BXT8 1623 aaKnown RBP18.63■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 PTPRMP28827 1452 aa18.6■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 CNTLNQ9NXG0 1405 aa18.6■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 MROH1Q8NDA8 1641 aa18.59■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 HFM1A2PYH4 1435 aa18.59■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 NAIPQ13075 1403 aa18.59■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 GCC2Q8IWJ2 1684 aa18.58■□□□□ 0.57
CCDC144NL-AS1-216ENST00000582583 DEPDC5O75140 1603 aa18.58■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 PRDM15P57071 1507 aaPredicted RBP18.57■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 KANK1Q14678 1352 aa18.54■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 ABCC3O15438 1527 aa18.53■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 ZMYM3Q14202 1370 aa18.53■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 UNC13BO14795 1591 aa18.52■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 CEBPAP49715 358 aaPredicted RBP18.52■□□□□ 0.56
CCDC144NL-AS1-216ENST00000582583 C3P01024 1663 aa18.52■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 CEP152O94986 1710 aa18.52■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 VWDEQ8N2E2 1590 aa18.5■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 CAMSAP1Q5T5Y3 1602 aa18.47■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 LMTK2Q8IWU2 1503 aa18.47■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 NUP155O75694 1391 aa18.46■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 PZPP20742 1482 aa18.46■□□□□ 0.55
CCDC144NL-AS1-216ENST00000582583 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 NPATQ14207 1427 aa18.43■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 ARHGAP31Q2M1Z3 1444 aa18.43■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 EFCAB6Q5THR3 1501 aa18.42■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 TET3O43151 1660 aa18.42■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 FBXO31Q5XUX0 539 aaPredicted RBP18.41■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
CCDC144NL-AS1-216ENST00000582583 SETD1BQ9UPS6 1966 aaKnown RBP18.39■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 PPP4R3CPQ6ZMV5 832 aa18.37■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 PREX1Q8TCU6 1659 aa18.37■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 TNRQ92752 1358 aa18.37■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 E9PCH4 1651 aa18.35■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.53
CCDC144NL-AS1-216ENST00000582583 NOS1P29475 1434 aa18.31■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 PKD2Q13563 968 aa18.3■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 NLRP1Q9C000 1473 aa18.3■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 SYNMO15061 1565 aa18.29■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 CEP170BQ9Y4F5 1589 aaPredicted RBP18.29■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 ZNF142P52746 1687 aaPredicted RBP18.29■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 A2ML1A8K2U0 1454 aa18.28■□□□□ 0.52
CCDC144NL-AS1-216ENST00000582583 HSPA2P54652 639 aa18.25■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 SPHKAPQ2M3C7 1700 aa18.25■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 PTPRTO14522 1441 aa18.24■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 IDI1Q13907 227 aa18.24■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 SLC52A1Q9NWF4 448 aa18.24■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 UGGT1Q9NYU2 1555 aa18.23■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 TRPM2O94759 1503 aa18.21■□□□□ 0.51
CCDC144NL-AS1-216ENST00000582583 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 KDM5AP29375 1690 aaKnown RBP18.17■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 CHGAP10645 457 aaKnown RBP18.15■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 TMEM131LA2VDJ0 1609 aa18.14■□□□□ 0.5
CCDC144NL-AS1-216ENST00000582583 CCDC144AA2RUR9 1427 aa18.13■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 STRCQ7RTU9 1775 aa18.12■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 SLIT1O75093 1534 aa18.11■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 KIF1BO60333 1816 aa18.1■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 ANKLE2Q86XL3 938 aa18.1■□□□□ 0.49
CCDC144NL-AS1-216ENST00000582583 NCKAP5LQ9HCH0 1330 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms