RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 ERICH6Q7L0X2 663 aa15.71■□□□□ 0.11
CDH8-207ENST00000582242 EVI5O60447 810 aa15.7■□□□□ 0.1
CDH8-207ENST00000582242 LHX6Q9UPM6 363 aa15.69■□□□□ 0.1
CDH8-207ENST00000582242 NUTM2FA1L443 756 aa15.68■□□□□ 0.1
CDH8-207ENST00000582242 TRIM66O15016 1216 aa15.68■□□□□ 0.1
CDH8-207ENST00000582242 DDX12PQ92771 950 aa15.68■□□□□ 0.1
CDH8-207ENST00000582242 RNF166Q96A37 237 aaPredicted RBP15.66■□□□□ 0.1
CDH8-207ENST00000582242 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
CDH8-207ENST00000582242 MINK1Q8N4C8 1332 aaPredicted RBP15.65■□□□□ 0.1
CDH8-207ENST00000582242 PDE4DQ08499 809 aa15.63■□□□□ 0.09
CDH8-207ENST00000582242 MAP2K5Q13163 448 aa15.63■□□□□ 0.09
CDH8-207ENST00000582242 GPBP1L1Q9HC44 474 aaPredicted RBP15.63■□□□□ 0.09
CDH8-207ENST00000582242 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
CDH8-207ENST00000582242 HIC1Q14526 733 aa15.62■□□□□ 0.09
CDH8-207ENST00000582242 KDM4FA0A1W2PPD8 638 aa15.61■□□□□ 0.09
CDH8-207ENST00000582242 GNPATO15228 680 aa15.61■□□□□ 0.09
CDH8-207ENST00000582242 FCHSD2O94868 740 aa15.61■□□□□ 0.09
CDH8-207ENST00000582242 PBX2P40425 430 aa15.61■□□□□ 0.09
CDH8-207ENST00000582242 LSM11P83369 360 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDH8-207ENST00000582242 ANKRD13DQ6ZTN6 518 aa15.61■□□□□ 0.09
CDH8-207ENST00000582242 DAXXQ9UER7 740 aaPredicted RBP15.61■□□□□ 0.09
CDH8-207ENST00000582242 PRIM1P49642 420 aaKnown RBP15.59■□□□□ 0.09
CDH8-207ENST00000582242 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
CDH8-207ENST00000582242 KDM4CQ9H3R0 1056 aa15.59■□□□□ 0.09
CDH8-207ENST00000582242 IRF6O14896 467 aa15.57■□□□□ 0.08
CDH8-207ENST00000582242 CCDC102AQ96A19 550 aa15.57■□□□□ 0.08
CDH8-207ENST00000582242 PSDA5PKW4 1024 aaPredicted RBP15.55■□□□□ 0.08
CDH8-207ENST00000582242 PTGDRQ13258 359 aa15.54■□□□□ 0.08
CDH8-207ENST00000582242 PHF14O94880 888 aa15.53■□□□□ 0.08
CDH8-207ENST00000582242 AXIN2Q9Y2T1 843 aa15.53■□□□□ 0.08
CDH8-207ENST00000582242 EPAS1Q99814 870 aa15.52■□□□□ 0.08
CDH8-207ENST00000582242 EN1Q05925 392 aaPredicted RBP15.51■□□□□ 0.07
CDH8-207ENST00000582242 AMHR2Q16671 573 aa15.51■□□□□ 0.07
CDH8-207ENST00000582242 FECHP22830 423 aa15.5■□□□□ 0.07
CDH8-207ENST00000582242 ARHGAP33O14559 1287 aa15.46■□□□□ 0.07
CDH8-207ENST00000582242 C14orf37Q86TY3 774 aa15.46■□□□□ 0.07
CDH8-207ENST00000582242 IL27Q8NEV9 243 aa15.46■□□□□ 0.07
CDH8-207ENST00000582242 PCDHGA10Q9Y5H3 936 aa15.45■□□□□ 0.06
CDH8-207ENST00000582242 PARP9Q8IXQ6 854 aa15.43■□□□□ 0.06
CDH8-207ENST00000582242 CDHR5Q9HBB8 845 aa15.43■□□□□ 0.06
CDH8-207ENST00000582242 NPDC1Q9NQX5 325 aaPredicted RBP15.43■□□□□ 0.06
CDH8-207ENST00000582242 MAP3K7O43318 606 aa15.42■□□□□ 0.06
CDH8-207ENST00000582242 PPP4R3BQ5MIZ7 849 aa15.42■□□□□ 0.06
CDH8-207ENST00000582242 TYW1BQ6NUM6 668 aa15.42■□□□□ 0.06
CDH8-207ENST00000582242 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
CDH8-207ENST00000582242 ADGRD1Q6QNK2 874 aa15.4■□□□□ 0.06
CDH8-207ENST00000582242 FBXW7Q969H0 707 aa15.4■□□□□ 0.06
CDH8-207ENST00000582242 FAM117AQ9C073 453 aa15.38■□□□□ 0.05
CDH8-207ENST00000582242 RBM33Q96EV2 1170 aaKnown RBP15.37■□□□□ 0.05
CDH8-207ENST00000582242 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
CDH8-207ENST00000582242 PSEN2P49810 448 aa15.36■□□□□ 0.05
CDH8-207ENST00000582242 FOSBP53539 338 aa15.35■□□□□ 0.05
CDH8-207ENST00000582242 TSR1Q2NL82 804 aaKnown RBP15.35■□□□□ 0.05
CDH8-207ENST00000582242 DMRTA1Q5VZB9 504 aa15.35■□□□□ 0.05
CDH8-207ENST00000582242 TK2O00142 265 aa15.34■□□□□ 0.05
CDH8-207ENST00000582242 TTLL12Q14166 644 aaPredicted RBP15.33■□□□□ 0.04
CDH8-207ENST00000582242 PLEKHG3A1L390 1219 aa15.32■□□□□ 0.04
CDH8-207ENST00000582242 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
CDH8-207ENST00000582242 HRO43593 1189 aa15.29■□□□□ 0.04
CDH8-207ENST00000582242 GIGYF2Q6Y7W6 1299 aaKnown RBP15.28■□□□□ 0.04
CDH8-207ENST00000582242 ZDHHC16Q969W1 377 aa15.27■□□□□ 0.04
CDH8-207ENST00000582242 ZNF454Q8N9F8 522 aa15.26■□□□□ 0.03
CDH8-207ENST00000582242 KCNK17Q96T54 332 aa15.26■□□□□ 0.03
CDH8-207ENST00000582242 C6orf132Q5T0Z8 1188 aa15.25■□□□□ 0.03
CDH8-207ENST00000582242 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
CDH8-207ENST00000582242 TMUB1Q9BVT8 246 aa15.25■□□□□ 0.03
CDH8-207ENST00000582242 REPIN1Q9BWE0 567 aaKnown RBP15.24■□□□□ 0.03
CDH8-207ENST00000582242 CLCN1P35523 988 aa15.23■□□□□ 0.03
CDH8-207ENST00000582242 RBM27Q9P2N5 1060 aaKnown RBP15.23■□□□□ 0.03
CDH8-207ENST00000582242 MS4A1P11836 297 aa15.22■□□□□ 0.03
CDH8-207ENST00000582242 BCL2L12Q9HB09 334 aa15.22■□□□□ 0.03
CDH8-207ENST00000582242 GOPCQ9HD26 462 aa15.22■□□□□ 0.03
CDH8-207ENST00000582242 PHOX2BQ99453 314 aa15.21■□□□□ 0.03
CDH8-207ENST00000582242 GPCPD1Q9NPB8 672 aa15.2■□□□□ 0.02
CDH8-207ENST00000582242 HCSTQ9UBK5 93 aa15.2■□□□□ 0.02
CDH8-207ENST00000582242 PADI6Q6TGC4 694 aa15.19■□□□□ 0.02
CDH8-207ENST00000582242 TTC13Q8NBP0 860 aa15.19■□□□□ 0.02
CDH8-207ENST00000582242 ADAM33Q9BZ11 813 aa15.19■□□□□ 0.02
CDH8-207ENST00000582242 OATP04181 439 aa15.18■□□□□ 0.02
CDH8-207ENST00000582242 METTL3Q86U44 580 aaKnown RBP15.18■□□□□ 0.02
CDH8-207ENST00000582242 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
CDH8-207ENST00000582242 ADGRG1Q9Y653 693 aa15.17■□□□□ 0.02
CDH8-207ENST00000582242 VPS9D1Q9Y2B5 631 aa15.16■□□□□ 0.02
CDH8-207ENST00000582242 PXYLP1Q8TE99 480 aa15.14■□□□□ 0.01
CDH8-207ENST00000582242 SLC4A5Q9BY07 1137 aa15.14■□□□□ 0.01
CDH8-207ENST00000582242 PTPREP23469 700 aa15.13■□□□□ 0.01
CDH8-207ENST00000582242 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
CDH8-207ENST00000582242 PRSS12P56730 875 aa15.12■□□□□ 0.01
CDH8-207ENST00000582242 STAC3Q96MF2 364 aa15.12■□□□□ 0.01
CDH8-207ENST00000582242 SSTR3P32745 418 aaPredicted RBP15.11■□□□□ 0.01
CDH8-207ENST00000582242 KCTD12Q96CX2 325 aaKnown RBP15.1■□□□□ 0.01
CDH8-207ENST00000582242 CDCA7LQ96GN5 454 aa15.09■□□□□ 0.01
CDH8-207ENST00000582242 FAM217BQ9NTX9 383 aaPredicted RBP15.09■□□□□ 0.01
CDH8-207ENST00000582242 SH3D19Q5HYK7 790 aa15.08■□□□□ 0
CDH8-207ENST00000582242 ZBED2Q9BTP6 218 aa15.08■□□□□ 0
CDH8-207ENST00000582242 PLA2G2EQ9NZK7 142 aa15.08■□□□□ 0
CDH8-207ENST00000582242 PCMTD1Q96MG8 357 aaPredicted RBP15.06■□□□□ 0
CDH8-207ENST00000582242 BHMG1C9JSJ3 638 aaPredicted RBP15.05■□□□□ -0
CDH8-207ENST00000582242 RBM46Q8TBY0 533 aaKnown RBP15.05■□□□□ -0
CDH8-207ENST00000582242 NLRP7Q8WX94 980 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms