RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 RNF17Q9BXT8 1623 aaKnown RBP17.2■□□□□ 0.34
GGA3-211ENST00000582232 UNC13BO14795 1591 aa17.19■□□□□ 0.34
GGA3-211ENST00000582232 KIF3BO15066 747 aa17.17■□□□□ 0.34
GGA3-211ENST00000582232 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
GGA3-211ENST00000582232 PRDM15P57071 1507 aaPredicted RBP17.16■□□□□ 0.34
GGA3-211ENST00000582232 KDM5DQ9BY66 1539 aa17.15■□□□□ 0.34
GGA3-211ENST00000582232 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
GGA3-211ENST00000582232 FAM135AQ9P2D6 1515 aa17.13■□□□□ 0.33
GGA3-211ENST00000582232 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
GGA3-211ENST00000582232 IQGAP3Q86VI3 1631 aa17.11■□□□□ 0.33
GGA3-211ENST00000582232 KDM4FA0A1W2PPD8 638 aa17.1■□□□□ 0.33
GGA3-211ENST00000582232 GGT6Q6P531 493 aa17.09■□□□□ 0.33
GGA3-211ENST00000582232 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
GGA3-211ENST00000582232 NUP155O75694 1391 aa17.09■□□□□ 0.33
GGA3-211ENST00000582232 KANK1Q14678 1352 aa17.09■□□□□ 0.33
GGA3-211ENST00000582232 LMTK2Q8IWU2 1503 aa17.09■□□□□ 0.33
GGA3-211ENST00000582232 ZC3H13Q5T200 1668 aaKnown RBP17.09■□□□□ 0.33
GGA3-211ENST00000582232 PZPP20742 1482 aa17.07■□□□□ 0.32
GGA3-211ENST00000582232 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
GGA3-211ENST00000582232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.329e-8■■■□□ 15.1
GGA3-211ENST00000582232 ABCC3O15438 1527 aa17.06■□□□□ 0.32
GGA3-211ENST00000582232 TET3O43151 1660 aa17.05■□□□□ 0.32
GGA3-211ENST00000582232 CEP152O94986 1710 aa17.04■□□□□ 0.32
GGA3-211ENST00000582232 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
GGA3-211ENST00000582232 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
GGA3-211ENST00000582232 MLECQ14165 292 aa17.03■□□□□ 0.32
GGA3-211ENST00000582232 CNTLNQ9NXG0 1405 aa17.03■□□□□ 0.32
GGA3-211ENST00000582232 MROH2AA6NES4 1674 aa17.02■□□□□ 0.32
GGA3-211ENST00000582232 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
GGA3-211ENST00000582232 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.31
GGA3-211ENST00000582232 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
GGA3-211ENST00000582232 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
GGA3-211ENST00000582232 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
GGA3-211ENST00000582232 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
GGA3-211ENST00000582232 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
GGA3-211ENST00000582232 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
GGA3-211ENST00000582232 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
GGA3-211ENST00000582232 E9PCH4 1651 aa16.98■□□□□ 0.31
GGA3-211ENST00000582232 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
GGA3-211ENST00000582232 MADDQ8WXG6 1647 aa16.98■□□□□ 0.31
GGA3-211ENST00000582232 PKD2Q13563 968 aa16.96■□□□□ 0.31
GGA3-211ENST00000582232 NPATQ14207 1427 aa16.96■□□□□ 0.3
GGA3-211ENST00000582232 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
GGA3-211ENST00000582232 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
GGA3-211ENST00000582232 C3P01024 1663 aa16.93■□□□□ 0.3
GGA3-211ENST00000582232 PTPRTO14522 1441 aa16.92■□□□□ 0.3
GGA3-211ENST00000582232 SPHKAPQ2M3C7 1700 aa16.91■□□□□ 0.3
GGA3-211ENST00000582232 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
GGA3-211ENST00000582232 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
GGA3-211ENST00000582232 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
GGA3-211ENST00000582232 CFAP65Q6ZU64 1925 aaKnown RBP16.9■□□□□ 0.3
GGA3-211ENST00000582232 NOS1P29475 1434 aa16.9■□□□□ 0.3
GGA3-211ENST00000582232 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.3
GGA3-211ENST00000582232 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
GGA3-211ENST00000582232 ERVK-7P63135 1459 aa16.88■□□□□ 0.29
GGA3-211ENST00000582232 TRPM2O94759 1503 aa16.88■□□□□ 0.29
GGA3-211ENST00000582232 FOXD1Q16676 465 aa16.88■□□□□ 0.29
GGA3-211ENST00000582232 PTPRMP28827 1452 aa16.87■□□□□ 0.29
GGA3-211ENST00000582232 SYNMO15061 1565 aa16.85■□□□□ 0.29
GGA3-211ENST00000582232 FBXO31Q5XUX0 539 aaPredicted RBP16.85■□□□□ 0.29
GGA3-211ENST00000582232 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
GGA3-211ENST00000582232 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
GGA3-211ENST00000582232 PIK3C2BO00750 1634 aa16.84■□□□□ 0.29
GGA3-211ENST00000582232 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
GGA3-211ENST00000582232 SLC52A1Q9NWF4 448 aa16.82■□□□□ 0.28
GGA3-211ENST00000582232 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
GGA3-211ENST00000582232 CCDC144AA2RUR9 1427 aa16.8■□□□□ 0.28
GGA3-211ENST00000582232 TNRQ92752 1358 aa16.8■□□□□ 0.28
GGA3-211ENST00000582232 NLRP1Q9C000 1473 aa16.79■□□□□ 0.28
GGA3-211ENST00000582232 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
GGA3-211ENST00000582232 KIF1BO60333 1816 aa16.77■□□□□ 0.28
GGA3-211ENST00000582232 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.28
GGA3-211ENST00000582232 IDI1Q13907 227 aa16.77■□□□□ 0.28
GGA3-211ENST00000582232 KDM5AP29375 1690 aaKnown RBP16.77■□□□□ 0.28
GGA3-211ENST00000582232 MYO3AQ8NEV4 1616 aa16.75■□□□□ 0.27
GGA3-211ENST00000582232 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
GGA3-211ENST00000582232 ZNF142P52746 1687 aaPredicted RBP16.74■□□□□ 0.27
GGA3-211ENST00000582232 TMEM131LA2VDJ0 1609 aa16.74■□□□□ 0.27
GGA3-211ENST00000582232 SPATA31E1Q6ZUB1 1445 aa16.73■□□□□ 0.27
GGA3-211ENST00000582232 ADGRB3O60242 1522 aa16.73■□□□□ 0.27
GGA3-211ENST00000582232 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
GGA3-211ENST00000582232 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
GGA3-211ENST00000582232 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
GGA3-211ENST00000582232 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
GGA3-211ENST00000582232 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
GGA3-211ENST00000582232 MYO5BQ9ULV0 1848 aa16.7■□□□□ 0.26
GGA3-211ENST00000582232 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
GGA3-211ENST00000582232 UHRF1BP1Q6BDS2 1440 aa16.69■□□□□ 0.26
GGA3-211ENST00000582232 RPGRIP1LQ68CZ1 1315 aa16.66■□□□□ 0.26
GGA3-211ENST00000582232 IFT172Q9UG01 1749 aa16.65■□□□□ 0.26
GGA3-211ENST00000582232 THEMISQ8N1K5 641 aaPredicted RBP16.65■□□□□ 0.26
GGA3-211ENST00000582232 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
GGA3-211ENST00000582232 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
GGA3-211ENST00000582232 TONSLQ96HA7 1378 aa16.64■□□□□ 0.26
GGA3-211ENST00000582232 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
GGA3-211ENST00000582232 SLIT1O75093 1534 aa16.64■□□□□ 0.25
GGA3-211ENST00000582232 PPLO60437 1756 aa16.64■□□□□ 0.25
GGA3-211ENST00000582232 ARHGAP23Q9P227 1491 aa16.63■□□□□ 0.25
GGA3-211ENST00000582232 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
GGA3-211ENST00000582232 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms