RNA–Protein interactions for RNA: ENST00000582097.5

KPNB1-211, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 2,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-211ENST00000582097 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
KPNB1-211ENST00000582097 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
KPNB1-211ENST00000582097 KIDINS220Q9ULH0 1771 aa12.29□□□□□ -0.44
KPNB1-211ENST00000582097 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
KPNB1-211ENST00000582097 MLH3Q9UHC1 1453 aa12.29□□□□□ -0.44
KPNB1-211ENST00000582097 KIF3BO15066 747 aa12.29□□□□□ -0.44
KPNB1-211ENST00000582097 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
KPNB1-211ENST00000582097 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
KPNB1-211ENST00000582097 ANKRD30BQ9BXX2 1392 aa12.28□□□□□ -0.44
KPNB1-211ENST00000582097 HECW2Q9P2P5 1572 aa12.28□□□□□ -0.44
KPNB1-211ENST00000582097 KDM5DQ9BY66 1539 aa12.28□□□□□ -0.44
KPNB1-211ENST00000582097 ARXQ96QS3 562 aa12.27□□□□□ -0.44
KPNB1-211ENST00000582097 TONSLQ96HA7 1378 aa12.27□□□□□ -0.45
KPNB1-211ENST00000582097 FAM135AQ9P2D6 1515 aa12.27□□□□□ -0.45
KPNB1-211ENST00000582097 UNC13BO14795 1591 aa12.27□□□□□ -0.45
KPNB1-211ENST00000582097 A2MP01023 1474 aa12.26□□□□□ -0.45
KPNB1-211ENST00000582097 RICTORQ6R327 1708 aa12.26□□□□□ -0.45
KPNB1-211ENST00000582097 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
KPNB1-211ENST00000582097 FRMPD1Q5SYB0 1578 aa12.24□□□□□ -0.45
KPNB1-211ENST00000582097 YEATS2Q9ULM3 1422 aa12.24□□□□□ -0.45
KPNB1-211ENST00000582097 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
KPNB1-211ENST00000582097 MAGI2Q86UL8 1455 aa12.23□□□□□ -0.45
KPNB1-211ENST00000582097 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
KPNB1-211ENST00000582097 COL17A1Q9UMD9 1497 aaPredicted RBP12.23□□□□□ -0.45
KPNB1-211ENST00000582097 KANK1Q14678 1352 aa12.22□□□□□ -0.45
KPNB1-211ENST00000582097 GGT6Q6P531 493 aa12.22□□□□□ -0.45
KPNB1-211ENST00000582097 DIP2CQ9Y2E4 1556 aa12.22□□□□□ -0.45
KPNB1-211ENST00000582097 IQGAP3Q86VI3 1631 aa12.22□□□□□ -0.45
KPNB1-211ENST00000582097 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.46
KPNB1-211ENST00000582097 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
KPNB1-211ENST00000582097 RPRD2Q5VT52 1461 aaKnown RBP12.2□□□□□ -0.46
KPNB1-211ENST00000582097 ZMYM4Q5VZL5 1548 aa12.2□□□□□ -0.46
KPNB1-211ENST00000582097 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
KPNB1-211ENST00000582097 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
KPNB1-211ENST00000582097 DEPDC5O75140 1603 aa12.19□□□□□ -0.46
KPNB1-211ENST00000582097 MROH1Q8NDA8 1641 aa12.17□□□□□ -0.46
KPNB1-211ENST00000582097 PRDM15P57071 1507 aaPredicted RBP12.17□□□□□ -0.46
KPNB1-211ENST00000582097 ATP10AO60312 1499 aa12.16□□□□□ -0.46
KPNB1-211ENST00000582097 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
KPNB1-211ENST00000582097 VWDEQ8N2E2 1590 aa12.15□□□□□ -0.46
KPNB1-211ENST00000582097 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
KPNB1-211ENST00000582097 CCDC144AA2RUR9 1427 aa12.15□□□□□ -0.46
KPNB1-211ENST00000582097 WASHC2CQ9Y4E1 1318 aa12.15□□□□□ -0.46
KPNB1-211ENST00000582097 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.46
KPNB1-211ENST00000582097 E9PCH4 1651 aa12.13□□□□□ -0.47
KPNB1-211ENST00000582097 TET3O43151 1660 aa12.13□□□□□ -0.47
KPNB1-211ENST00000582097 MLECQ14165 292 aa12.12□□□□□ -0.47
KPNB1-211ENST00000582097 BCORL1Q5H9F3 1711 aa12.12□□□□□ -0.47
KPNB1-211ENST00000582097 RGL3Q3MIN7 710 aa12.11□□□□□ -0.47
KPNB1-211ENST00000582097 LMTK2Q8IWU2 1503 aa12.11□□□□□ -0.47
KPNB1-211ENST00000582097 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
KPNB1-211ENST00000582097 ARHGEF40Q8TER5 1519 aa12.1□□□□□ -0.47
KPNB1-211ENST00000582097 CEP152O94986 1710 aa12.1□□□□□ -0.47
KPNB1-211ENST00000582097 KDM2AQ9Y2K7 1162 aa12.1□□□□□ -0.47
KPNB1-211ENST00000582097 ABCC3O15438 1527 aa12.1□□□□□ -0.47
KPNB1-211ENST00000582097 EFCAB6Q5THR3 1501 aa12.1□□□□□ -0.47
KPNB1-211ENST00000582097 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
KPNB1-211ENST00000582097 DCAF11Q8TEB1 546 aa12.09□□□□□ -0.47
KPNB1-211ENST00000582097 PTPRTO14522 1441 aa12.09□□□□□ -0.47
KPNB1-211ENST00000582097 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
KPNB1-211ENST00000582097 REREQ9P2R6 1566 aa12.08□□□□□ -0.48
KPNB1-211ENST00000582097 NPATQ14207 1427 aa12.08□□□□□ -0.48
KPNB1-211ENST00000582097 TRPM2O94759 1503 aa12.07□□□□□ -0.48
KPNB1-211ENST00000582097 AGLP35573 1532 aa12.07□□□□□ -0.48
KPNB1-211ENST00000582097 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
KPNB1-211ENST00000582097 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
KPNB1-211ENST00000582097 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
KPNB1-211ENST00000582097 UGGT1Q9NYU2 1555 aa12.04□□□□□ -0.48
KPNB1-211ENST00000582097 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
KPNB1-211ENST00000582097 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
KPNB1-211ENST00000582097 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
KPNB1-211ENST00000582097 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
KPNB1-211ENST00000582097 ESF1Q9H501 851 aaKnown RBP12.03□□□□□ -0.48
KPNB1-211ENST00000582097 ZC3H13Q5T200 1668 aaKnown RBP12.03□□□□□ -0.48
KPNB1-211ENST00000582097 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
KPNB1-211ENST00000582097 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.48
KPNB1-211ENST00000582097 ARHGAP31Q2M1Z3 1444 aa12.02□□□□□ -0.49
KPNB1-211ENST00000582097 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
KPNB1-211ENST00000582097 FBXO31Q5XUX0 539 aaPredicted RBP12.01□□□□□ -0.49
KPNB1-211ENST00000582097 UHRF1BP1Q6BDS2 1440 aa12.01□□□□□ -0.49
KPNB1-211ENST00000582097 NOS1P29475 1434 aa12□□□□□ -0.49
KPNB1-211ENST00000582097 HSPA5P11021 654 aaKnown RBP12□□□□□ -0.49
KPNB1-211ENST00000582097 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.491e-16■□□□□ 10.7
KPNB1-211ENST00000582097 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
KPNB1-211ENST00000582097 CLTCQ00610 1675 aaKnown RBP11.98□□□□□ -0.49
KPNB1-211ENST00000582097 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
KPNB1-211ENST00000582097 IDI1Q13907 227 aa11.98□□□□□ -0.49
KPNB1-211ENST00000582097 SYNMO15061 1565 aa11.97□□□□□ -0.49
KPNB1-211ENST00000582097 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
KPNB1-211ENST00000582097 MIER1Q8N108 512 aa11.96□□□□□ -0.49
KPNB1-211ENST00000582097 SLC52A1Q9NWF4 448 aa11.96□□□□□ -0.49
KPNB1-211ENST00000582097 ROCK2O75116 1388 aaKnown RBP11.96□□□□□ -0.49
KPNB1-211ENST00000582097 ZMYM3Q14202 1370 aa11.96□□□□□ -0.49
KPNB1-211ENST00000582097 RALGAPBQ86X10 1494 aa11.96□□□□□ -0.49
KPNB1-211ENST00000582097 ERVK-7P63135 1459 aa11.96□□□□□ -0.5
KPNB1-211ENST00000582097 KIF1BO60333 1816 aa11.95□□□□□ -0.5
KPNB1-211ENST00000582097 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
KPNB1-211ENST00000582097 PREX1Q8TCU6 1659 aa11.95□□□□□ -0.5
KPNB1-211ENST00000582097 ADGRB3O60242 1522 aa11.94□□□□□ -0.5
KPNB1-211ENST00000582097 MROH2AA6NES4 1674 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms