RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
PPP4R1-220ENST00000581835 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
PPP4R1-220ENST00000581835 RNF17Q9BXT8 1623 aaKnown RBP15.84■□□□□ 0.13
PPP4R1-220ENST00000581835 RRP7BPQ9NSQ0 103 aa15.84■□□□□ 0.13
PPP4R1-220ENST00000581835 CHIC2Q9UKJ5 165 aa15.84■□□□□ 0.13
PPP4R1-220ENST00000581835 NPATQ14207 1427 aa15.84■□□□□ 0.13
PPP4R1-220ENST00000581835 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
PPP4R1-220ENST00000581835 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
PPP4R1-220ENST00000581835 WASHC2CQ9Y4E1 1318 aa15.83■□□□□ 0.12
PPP4R1-220ENST00000581835 PTPRKQ15262 1439 aa15.83■□□□□ 0.12
PPP4R1-220ENST00000581835 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
PPP4R1-220ENST00000581835 ERBINQ96RT1 1412 aa15.81■□□□□ 0.12
PPP4R1-220ENST00000581835 ANKRD30AQ9BXX3 1397 aa15.81■□□□□ 0.12
PPP4R1-220ENST00000581835 MROH1Q8NDA8 1641 aa15.8■□□□□ 0.12
PPP4R1-220ENST00000581835 ADGRL2O95490 1459 aa15.79■□□□□ 0.12
PPP4R1-220ENST00000581835 ZC3H13Q5T200 1668 aaKnown RBP15.78■□□□□ 0.12
PPP4R1-220ENST00000581835 PZPP20742 1482 aa15.78■□□□□ 0.12
PPP4R1-220ENST00000581835 FBXO31Q5XUX0 539 aaPredicted RBP15.77■□□□□ 0.12
PPP4R1-220ENST00000581835 ABCC3O15438 1527 aa15.77■□□□□ 0.11
PPP4R1-220ENST00000581835 STRCQ7RTU9 1775 aa15.77■□□□□ 0.11
PPP4R1-220ENST00000581835 MYO3AQ8NEV4 1616 aa15.76■□□□□ 0.11
PPP4R1-220ENST00000581835 CEP152O94986 1710 aa15.76■□□□□ 0.11
PPP4R1-220ENST00000581835 CFAP65Q6ZU64 1925 aaKnown RBP15.76■□□□□ 0.11
PPP4R1-220ENST00000581835 DEPDC5O75140 1603 aa15.76■□□□□ 0.11
PPP4R1-220ENST00000581835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.111e-18■■■■□ 20.3
PPP4R1-220ENST00000581835 PRDM15P57071 1507 aaPredicted RBP15.75■□□□□ 0.11
PPP4R1-220ENST00000581835 ZNF142P52746 1687 aaPredicted RBP15.75■□□□□ 0.11
PPP4R1-220ENST00000581835 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
PPP4R1-220ENST00000581835 CEP170BQ9Y4F5 1589 aaPredicted RBP15.72■□□□□ 0.11
PPP4R1-220ENST00000581835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.112e-6■■□□□ 14.2
PPP4R1-220ENST00000581835 TNRQ92752 1358 aa15.72■□□□□ 0.11
PPP4R1-220ENST00000581835 RRBP1Q9P2E9 1410 aaKnown RBP15.71■□□□□ 0.11
PPP4R1-220ENST00000581835 ANKRD50Q9ULJ7 1429 aa15.71■□□□□ 0.11
PPP4R1-220ENST00000581835 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
PPP4R1-220ENST00000581835 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
PPP4R1-220ENST00000581835 ITGAEP38570 1179 aa15.69■□□□□ 0.1
PPP4R1-220ENST00000581835 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
PPP4R1-220ENST00000581835 KANK1Q14678 1352 aa15.69■□□□□ 0.1
PPP4R1-220ENST00000581835 VWDEQ8N2E2 1590 aa15.69■□□□□ 0.1
PPP4R1-220ENST00000581835 ARHGAP31Q2M1Z3 1444 aa15.68■□□□□ 0.1
PPP4R1-220ENST00000581835 SPATA31D1Q6ZQQ2 1576 aa15.68■□□□□ 0.1
PPP4R1-220ENST00000581835 ERVK-7P63135 1459 aa15.67■□□□□ 0.1
PPP4R1-220ENST00000581835 LMTK2Q8IWU2 1503 aa15.67■□□□□ 0.1
PPP4R1-220ENST00000581835 NLRP1Q9C000 1473 aa15.66■□□□□ 0.1
PPP4R1-220ENST00000581835 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
PPP4R1-220ENST00000581835 PTPRTO14522 1441 aa15.65■□□□□ 0.1
PPP4R1-220ENST00000581835 NCKAP5LQ9HCH0 1330 aa15.64■□□□□ 0.09
PPP4R1-220ENST00000581835 UNC13BO14795 1591 aa15.62■□□□□ 0.09
PPP4R1-220ENST00000581835 UGGT1Q9NYU2 1555 aa15.62■□□□□ 0.09
PPP4R1-220ENST00000581835 PKD2Q13563 968 aa15.62■□□□□ 0.09
PPP4R1-220ENST00000581835 THEMISQ8N1K5 641 aaPredicted RBP15.61■□□□□ 0.09
PPP4R1-220ENST00000581835 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
PPP4R1-220ENST00000581835 POLR1AO95602 1720 aaPredicted RBP15.59■□□□□ 0.09
PPP4R1-220ENST00000581835 TET3O43151 1660 aa15.58■□□□□ 0.08
PPP4R1-220ENST00000581835 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
PPP4R1-220ENST00000581835 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
PPP4R1-220ENST00000581835 UBR1Q8IWV7 1749 aa15.57■□□□□ 0.08
PPP4R1-220ENST00000581835 IQGAP3Q86VI3 1631 aa15.57■□□□□ 0.08
PPP4R1-220ENST00000581835 ANKLE2Q86XL3 938 aa15.56■□□□□ 0.08
PPP4R1-220ENST00000581835 NOS1P29475 1434 aa15.56■□□□□ 0.08
PPP4R1-220ENST00000581835 RPRD2Q5VT52 1461 aaKnown RBP15.56■□□□□ 0.08
PPP4R1-220ENST00000581835 SYNMO15061 1565 aa15.56■□□□□ 0.08
PPP4R1-220ENST00000581835 NEURL4Q96JN8 1562 aa15.55■□□□□ 0.08
PPP4R1-220ENST00000581835 NAIPQ13075 1403 aa15.55■□□□□ 0.08
PPP4R1-220ENST00000581835 NUP155O75694 1391 aa15.55■□□□□ 0.08
PPP4R1-220ENST00000581835 CERKQ8TCT0 537 aa15.55■□□□□ 0.08
PPP4R1-220ENST00000581835 PIK3C2BO00750 1634 aa15.54■□□□□ 0.08
PPP4R1-220ENST00000581835 IDI1Q13907 227 aa15.54■□□□□ 0.08
PPP4R1-220ENST00000581835 E9PCH4 1651 aa15.54■□□□□ 0.08
PPP4R1-220ENST00000581835 LTBP4Q8N2S1 1624 aa15.53■□□□□ 0.08
PPP4R1-220ENST00000581835 KDM5AP29375 1690 aaKnown RBP15.52■□□□□ 0.08
PPP4R1-220ENST00000581835 FBXO41Q8TF61 875 aa15.52■□□□□ 0.08
PPP4R1-220ENST00000581835 MED14O60244 1454 aa15.52■□□□□ 0.07
PPP4R1-220ENST00000581835 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
PPP4R1-220ENST00000581835 SLC52A1Q9NWF4 448 aa15.51■□□□□ 0.07
PPP4R1-220ENST00000581835 ZNF335Q9H4Z2 1342 aaPredicted RBP15.5■□□□□ 0.07
PPP4R1-220ENST00000581835 SLIT1O75093 1534 aa15.5■□□□□ 0.07
PPP4R1-220ENST00000581835 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
PPP4R1-220ENST00000581835 ARHGAP23Q9P227 1491 aa15.5■□□□□ 0.07
PPP4R1-220ENST00000581835 NPHP4O75161 1426 aaPredicted RBP15.49■□□□□ 0.07
PPP4R1-220ENST00000581835 IQGAP1P46940 1657 aa15.48■□□□□ 0.07
PPP4R1-220ENST00000581835 LTKP29376 864 aa15.48■□□□□ 0.07
PPP4R1-220ENST00000581835 SCAF11Q99590 1463 aaKnown RBP15.47■□□□□ 0.07
PPP4R1-220ENST00000581835 MYO5BQ9ULV0 1848 aa15.47■□□□□ 0.07
PPP4R1-220ENST00000581835 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
PPP4R1-220ENST00000581835 TMEM2Q9UHN6 1383 aa15.47■□□□□ 0.07
PPP4R1-220ENST00000581835 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
PPP4R1-220ENST00000581835 EID1Q9Y6B2 187 aa15.45■□□□□ 0.06
PPP4R1-220ENST00000581835 TMEM131LA2VDJ0 1609 aa15.43■□□□□ 0.06
PPP4R1-220ENST00000581835 SPHKAPQ2M3C7 1700 aa15.43■□□□□ 0.06
PPP4R1-220ENST00000581835 IQSEC2Q5JU85 1478 aa15.42■□□□□ 0.06
PPP4R1-220ENST00000581835 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
PPP4R1-220ENST00000581835 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
PPP4R1-220ENST00000581835 STRCP1A6NGW2 1772 aa15.39■□□□□ 0.05
PPP4R1-220ENST00000581835 CPS1P31327 1500 aa15.38■□□□□ 0.05
PPP4R1-220ENST00000581835 ZFYVE9O95405 1425 aa15.38■□□□□ 0.05
PPP4R1-220ENST00000581835 RIMS2Q9UQ26 1411 aa15.37■□□□□ 0.05
PPP4R1-220ENST00000581835 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
PPP4R1-220ENST00000581835 HDGFP51858 240 aaKnown RBP15.36■□□□□ 0.05
PPP4R1-220ENST00000581835 TRPM2O94759 1503 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms