RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 PREX2Q70Z35 1606 aa16.1■□□□□ 0.17
CTC1-208ENST00000581671 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
CTC1-208ENST00000581671 A2MP01023 1474 aa16.1■□□□□ 0.17
CTC1-208ENST00000581671 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
CTC1-208ENST00000581671 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
CTC1-208ENST00000581671 UGGT1Q9NYU2 1555 aa16.09■□□□□ 0.17
CTC1-208ENST00000581671 RXRBP28702 533 aa16.08■□□□□ 0.16
CTC1-208ENST00000581671 JCADQ9P266 1359 aa16.08■□□□□ 0.16
CTC1-208ENST00000581671 CLIP1P30622 1438 aa16.07■□□□□ 0.16
CTC1-208ENST00000581671 ZC3H13Q5T200 1668 aaKnown RBP16.06■□□□□ 0.16
CTC1-208ENST00000581671 LRP6O75581 1613 aa16.05■□□□□ 0.16
CTC1-208ENST00000581671 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
CTC1-208ENST00000581671 CDK12Q9NYV4 1490 aaPredicted RBP16.05■□□□□ 0.16
CTC1-208ENST00000581671 SETBP1Q9Y6X0 1596 aa16.04■□□□□ 0.16
CTC1-208ENST00000581671 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
CTC1-208ENST00000581671 ZRANB1Q9UGI0 708 aa16.04■□□□□ 0.16
CTC1-208ENST00000581671 PZPP20742 1482 aa16.03■□□□□ 0.16
CTC1-208ENST00000581671 MEX3CQ5U5Q3 659 aaKnown RBP16.03■□□□□ 0.16
CTC1-208ENST00000581671 MIA2Q96PC5 1412 aa16.02■□□□□ 0.16
CTC1-208ENST00000581671 PHLPP1O60346 1717 aa16.02■□□□□ 0.16
CTC1-208ENST00000581671 KDM5DQ9BY66 1539 aa16.01■□□□□ 0.15
CTC1-208ENST00000581671 INO80Q9ULG1 1556 aaPredicted RBP16■□□□□ 0.15
CTC1-208ENST00000581671 SYCP2Q9BX26 1530 aa16■□□□□ 0.15
CTC1-208ENST00000581671 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTC1-208ENST00000581671 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
CTC1-208ENST00000581671 CDC42BPAQ5VT25 1732 aa15.99■□□□□ 0.15
CTC1-208ENST00000581671 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
CTC1-208ENST00000581671 SPATA31A6Q5VVP1 1343 aa15.97■□□□□ 0.15
CTC1-208ENST00000581671 FOXD1Q16676 465 aa15.97■□□□□ 0.15
CTC1-208ENST00000581671 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
CTC1-208ENST00000581671 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
CTC1-208ENST00000581671 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
CTC1-208ENST00000581671 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
CTC1-208ENST00000581671 COL16A1Q07092 1604 aaPredicted RBP15.95■□□□□ 0.14
CTC1-208ENST00000581671 LRRIQ1Q96JM4 1722 aa15.94■□□□□ 0.14
CTC1-208ENST00000581671 RGS12O14924 1447 aa15.94■□□□□ 0.14
CTC1-208ENST00000581671 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
CTC1-208ENST00000581671 MAP3K1Q13233 1512 aa15.93■□□□□ 0.14
CTC1-208ENST00000581671 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
CTC1-208ENST00000581671 NUTM2BA6NNL0 878 aaPredicted RBP15.92■□□□□ 0.14
CTC1-208ENST00000581671 NUTM2EB1AL46 878 aaPredicted RBP15.92■□□□□ 0.14
CTC1-208ENST00000581671 NUTM2DQ5VT03 806 aaPredicted RBP15.92■□□□□ 0.14
CTC1-208ENST00000581671 NUTM2AQ8IVF1 878 aaPredicted RBP15.92■□□□□ 0.14
CTC1-208ENST00000581671 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
CTC1-208ENST00000581671 LTKP29376 864 aa15.9■□□□□ 0.14
CTC1-208ENST00000581671 SLAIN2Q9P270 581 aa15.9■□□□□ 0.14
CTC1-208ENST00000581671 WASHC2CQ9Y4E1 1318 aa15.9■□□□□ 0.14
CTC1-208ENST00000581671 KIAA1107Q9UPP5 1409 aa15.88■□□□□ 0.13
CTC1-208ENST00000581671 AFF2P51816 1311 aa15.88■□□□□ 0.13
CTC1-208ENST00000581671 KIF3BO15066 747 aa15.87■□□□□ 0.13
CTC1-208ENST00000581671 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
CTC1-208ENST00000581671 PROSER2Q86WR7 435 aaPredicted RBP15.87■□□□□ 0.13
CTC1-208ENST00000581671 DHX29Q7Z478 1369 aaKnown RBP15.87■□□□□ 0.13
CTC1-208ENST00000581671 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
CTC1-208ENST00000581671 RBM6P78332 1123 aaKnown RBP15.86■□□□□ 0.13
CTC1-208ENST00000581671 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
CTC1-208ENST00000581671 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
CTC1-208ENST00000581671 EP400Q96L91 3159 aa15.84■□□□□ 0.13
CTC1-208ENST00000581671 KCNA6P17658 529 aa15.84■□□□□ 0.13
CTC1-208ENST00000581671 MSH6P52701 1360 aa15.84■□□□□ 0.13
CTC1-208ENST00000581671 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
CTC1-208ENST00000581671 GPATCH8Q9UKJ3 1502 aaKnown RBP15.84■□□□□ 0.13
CTC1-208ENST00000581671 IFFO2Q5TF58 517 aa15.83■□□□□ 0.12
CTC1-208ENST00000581671 QTRT2Q9H974 415 aaKnown RBP15.83■□□□□ 0.12
CTC1-208ENST00000581671 ARHGAP23Q9P227 1491 aa15.83■□□□□ 0.12
CTC1-208ENST00000581671 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
CTC1-208ENST00000581671 SLIT1O75093 1534 aa15.82■□□□□ 0.12
CTC1-208ENST00000581671 PRDM15P57071 1507 aaPredicted RBP15.82■□□□□ 0.12
CTC1-208ENST00000581671 TIAM1Q13009 1591 aa15.82■□□□□ 0.12
CTC1-208ENST00000581671 LRP5O75197 1615 aa15.8■□□□□ 0.12
CTC1-208ENST00000581671 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
CTC1-208ENST00000581671 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
CTC1-208ENST00000581671 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
CTC1-208ENST00000581671 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
CTC1-208ENST00000581671 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.12
CTC1-208ENST00000581671 CFAP65Q6ZU64 1925 aaKnown RBP15.77■□□□□ 0.12
CTC1-208ENST00000581671 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.11
CTC1-208ENST00000581671 ABCC3O15438 1527 aa15.76■□□□□ 0.11
CTC1-208ENST00000581671 NKTRP30414 1462 aaKnown RBP15.76■□□□□ 0.11
CTC1-208ENST00000581671 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
CTC1-208ENST00000581671 SLC26A8Q96RN1 970 aa15.74■□□□□ 0.11
CTC1-208ENST00000581671 DIP2AQ14689 1571 aa15.74■□□□□ 0.11
CTC1-208ENST00000581671 KDM5AP29375 1690 aaKnown RBP15.73■□□□□ 0.11
CTC1-208ENST00000581671 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
CTC1-208ENST00000581671 CCDC125Q86Z20 511 aa15.73■□□□□ 0.11
CTC1-208ENST00000581671 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
CTC1-208ENST00000581671 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
CTC1-208ENST00000581671 MBD5Q9P267 1494 aa15.71■□□□□ 0.1
CTC1-208ENST00000581671 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
CTC1-208ENST00000581671 TMEM2Q9UHN6 1383 aa15.7■□□□□ 0.1
CTC1-208ENST00000581671 TET3O43151 1660 aa15.7■□□□□ 0.1
CTC1-208ENST00000581671 YY1P25490 414 aa15.68■□□□□ 0.1
CTC1-208ENST00000581671 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
CTC1-208ENST00000581671 EEA1Q15075 1411 aa15.65■□□□□ 0.1
CTC1-208ENST00000581671 CASKIN1Q8WXD9 1431 aa15.65■□□□□ 0.1
CTC1-208ENST00000581671 CAMSAP2Q08AD1 1489 aa15.64■□□□□ 0.09
CTC1-208ENST00000581671 MAST1Q9Y2H9 1570 aa15.63■□□□□ 0.09
CTC1-208ENST00000581671 NHSL1Q5SYE7 1610 aa15.63■□□□□ 0.09
CTC1-208ENST00000581671 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
CTC1-208ENST00000581671 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms