RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 EIF2AK4Q9P2K8 1649 aaKnown RBP19.41■□□□□ 0.7
SNORD55-201ENST00000581525 RRP7BPQ9NSQ0 103 aa19.41■□□□□ 0.7
SNORD55-201ENST00000581525 ERBINQ96RT1 1412 aa19.41■□□□□ 0.7
SNORD55-201ENST00000581525 NPATQ14207 1427 aa19.4■□□□□ 0.7
SNORD55-201ENST00000581525 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.7
SNORD55-201ENST00000581525 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
SNORD55-201ENST00000581525 LMTK3Q96Q04 1460 aa19.39■□□□□ 0.69
SNORD55-201ENST00000581525 RNF17Q9BXT8 1623 aaKnown RBP19.39■□□□□ 0.69
SNORD55-201ENST00000581525 C3P01024 1663 aa19.38■□□□□ 0.69
SNORD55-201ENST00000581525 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
SNORD55-201ENST00000581525 KDM5DQ9BY66 1539 aa19.37■□□□□ 0.69
SNORD55-201ENST00000581525 WASHC2CQ9Y4E1 1318 aa19.35■□□□□ 0.69
SNORD55-201ENST00000581525 MROH1Q8NDA8 1641 aa19.34■□□□□ 0.69
SNORD55-201ENST00000581525 CLTCQ00610 1675 aaKnown RBP19.33■□□□□ 0.68
SNORD55-201ENST00000581525 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
SNORD55-201ENST00000581525 ANKRD50Q9ULJ7 1429 aa19.3■□□□□ 0.68
SNORD55-201ENST00000581525 PRDM15P57071 1507 aaPredicted RBP19.3■□□□□ 0.68
SNORD55-201ENST00000581525 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
SNORD55-201ENST00000581525 PZPP20742 1482 aa19.29■□□□□ 0.68
SNORD55-201ENST00000581525 UHRF1BP1Q6BDS2 1440 aa19.29■□□□□ 0.68
SNORD55-201ENST00000581525 ABCC3O15438 1527 aa19.29■□□□□ 0.68
SNORD55-201ENST00000581525 ARHGAP31Q2M1Z3 1444 aa19.28■□□□□ 0.68
SNORD55-201ENST00000581525 PREX1Q8TCU6 1659 aa19.28■□□□□ 0.68
SNORD55-201ENST00000581525 VWDEQ8N2E2 1590 aa19.27■□□□□ 0.68
SNORD55-201ENST00000581525 ZC3H13Q5T200 1668 aaKnown RBP19.27■□□□□ 0.67
SNORD55-201ENST00000581525 LMTK2Q8IWU2 1503 aa19.26■□□□□ 0.67
SNORD55-201ENST00000581525 FBXO31Q5XUX0 539 aaPredicted RBP19.25■□□□□ 0.67
SNORD55-201ENST00000581525 HSPA2P54652 639 aa19.23■□□□□ 0.67
SNORD55-201ENST00000581525 KANK1Q14678 1352 aa19.22■□□□□ 0.67
SNORD55-201ENST00000581525 TNRQ92752 1358 aa19.2■□□□□ 0.66
SNORD55-201ENST00000581525 ITGAEP38570 1179 aa19.2■□□□□ 0.66
SNORD55-201ENST00000581525 SPATA31D1Q6ZQQ2 1576 aa19.19■□□□□ 0.66
SNORD55-201ENST00000581525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNORD55-201ENST00000581525 A2ML1A8K2U0 1454 aa19.17■□□□□ 0.66
SNORD55-201ENST00000581525 CAMSAP1Q5T5Y3 1602 aa19.17■□□□□ 0.66
SNORD55-201ENST00000581525 NAIPQ13075 1403 aa19.17■□□□□ 0.66
SNORD55-201ENST00000581525 ERVK-7P63135 1459 aa19.16■□□□□ 0.66
SNORD55-201ENST00000581525 NLRP1Q9C000 1473 aa19.16■□□□□ 0.66
SNORD55-201ENST00000581525 ZNF142P52746 1687 aaPredicted RBP19.16■□□□□ 0.66
SNORD55-201ENST00000581525 UNC13BO14795 1591 aa19.15■□□□□ 0.66
SNORD55-201ENST00000581525 CEP152O94986 1710 aa19.15■□□□□ 0.66
SNORD55-201ENST00000581525 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.66
SNORD55-201ENST00000581525 HFM1A2PYH4 1435 aa19.14■□□□□ 0.65
SNORD55-201ENST00000581525 CEP170BQ9Y4F5 1589 aaPredicted RBP19.14■□□□□ 0.65
SNORD55-201ENST00000581525 PLA2R1Q13018 1463 aa19.13■□□□□ 0.65
SNORD55-201ENST00000581525 RPRD2Q5VT52 1461 aaKnown RBP19.12■□□□□ 0.65
SNORD55-201ENST00000581525 NOS1P29475 1434 aa19.12■□□□□ 0.65
SNORD55-201ENST00000581525 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
SNORD55-201ENST00000581525 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
SNORD55-201ENST00000581525 EFCAB6Q5THR3 1501 aa19.1■□□□□ 0.65
SNORD55-201ENST00000581525 PTPRTO14522 1441 aa19.1■□□□□ 0.65
SNORD55-201ENST00000581525 PKD2Q13563 968 aa19.09■□□□□ 0.65
SNORD55-201ENST00000581525 THEMISQ8N1K5 641 aaPredicted RBP19.09■□□□□ 0.65
SNORD55-201ENST00000581525 NUP155O75694 1391 aa19.08■□□□□ 0.65
SNORD55-201ENST00000581525 IQGAP3Q86VI3 1631 aa19.07■□□□□ 0.64
SNORD55-201ENST00000581525 TET3O43151 1660 aa19.07■□□□□ 0.64
SNORD55-201ENST00000581525 SLC52A1Q9NWF4 448 aa19.06■□□□□ 0.64
SNORD55-201ENST00000581525 UGGT1Q9NYU2 1555 aa19.05■□□□□ 0.64
SNORD55-201ENST00000581525 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
SNORD55-201ENST00000581525 IDI1Q13907 227 aa19.04■□□□□ 0.64
SNORD55-201ENST00000581525 SYNMO15061 1565 aa19.02■□□□□ 0.63
SNORD55-201ENST00000581525 NCKAP5LQ9HCH0 1330 aa19.01■□□□□ 0.63
SNORD55-201ENST00000581525 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
SNORD55-201ENST00000581525 CFAP65Q6ZU64 1925 aaKnown RBP19■□□□□ 0.63
SNORD55-201ENST00000581525 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
SNORD55-201ENST00000581525 MED14O60244 1454 aa18.99■□□□□ 0.63
SNORD55-201ENST00000581525 ARHGAP23Q9P227 1491 aa18.99■□□□□ 0.63
SNORD55-201ENST00000581525 E9PCH4 1651 aa18.98■□□□□ 0.63
SNORD55-201ENST00000581525 KDM5AP29375 1690 aaKnown RBP18.98■□□□□ 0.63
SNORD55-201ENST00000581525 SLIT1O75093 1534 aa18.98■□□□□ 0.63
SNORD55-201ENST00000581525 UBR1Q8IWV7 1749 aa18.97■□□□□ 0.63
SNORD55-201ENST00000581525 SETD5Q9C0A6 1442 aa18.95■□□□□ 0.62
SNORD55-201ENST00000581525 HRCP23327 699 aa18.95■□□□□ 0.62
SNORD55-201ENST00000581525 TMEM2Q9UHN6 1383 aa18.94■□□□□ 0.62
SNORD55-201ENST00000581525 PIK3C2BO00750 1634 aa18.94■□□□□ 0.62
SNORD55-201ENST00000581525 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
SNORD55-201ENST00000581525 LTKP29376 864 aa18.93■□□□□ 0.62
SNORD55-201ENST00000581525 TRIM52Q96A61 297 aa18.91■□□□□ 0.62
SNORD55-201ENST00000581525 ADGRB3O60242 1522 aa18.9■□□□□ 0.62
SNORD55-201ENST00000581525 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.61
SNORD55-201ENST00000581525 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
SNORD55-201ENST00000581525 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
SNORD55-201ENST00000581525 LTBP4Q8N2S1 1624 aa18.89■□□□□ 0.61
SNORD55-201ENST00000581525 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
SNORD55-201ENST00000581525 SCAF11Q99590 1463 aaKnown RBP18.88■□□□□ 0.61
SNORD55-201ENST00000581525 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
SNORD55-201ENST00000581525 TMEM131LA2VDJ0 1609 aa18.87■□□□□ 0.61
SNORD55-201ENST00000581525 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
SNORD55-201ENST00000581525 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
SNORD55-201ENST00000581525 ZFYVE9O95405 1425 aa18.86■□□□□ 0.61
SNORD55-201ENST00000581525 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
SNORD55-201ENST00000581525 RAB3GAP2Q9H2M9 1393 aa18.85■□□□□ 0.61
SNORD55-201ENST00000581525 HDGFP51858 240 aaKnown RBP18.84■□□□□ 0.61
SNORD55-201ENST00000581525 TRPM2O94759 1503 aa18.84■□□□□ 0.61
SNORD55-201ENST00000581525 SPHKAPQ2M3C7 1700 aa18.83■□□□□ 0.61
SNORD55-201ENST00000581525 ZNF335Q9H4Z2 1342 aaPredicted RBP18.82■□□□□ 0.6
SNORD55-201ENST00000581525 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
SNORD55-201ENST00000581525 IQGAP1P46940 1657 aa18.8■□□□□ 0.6
SNORD55-201ENST00000581525 IQSEC2Q5JU85 1478 aa18.8■□□□□ 0.6
SNORD55-201ENST00000581525 RIMS2Q9UQ26 1411 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms