RNA–Protein interactions for RNA: ENST00000581448.5

PLEKHM1-207, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 1 (best)

Gene PLEKHM1, Length 3,292 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-207ENST00000581448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
PLEKHM1-207ENST00000581448 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
PLEKHM1-207ENST00000581448 KIF15Q9NS87 1388 aa17.18■□□□□ 0.34
PLEKHM1-207ENST00000581448 TEX14Q8IWB6 1497 aa17.17■□□□□ 0.34
PLEKHM1-207ENST00000581448 SLKQ9H2G2 1235 aaPredicted RBP17.16■□□□□ 0.34
PLEKHM1-207ENST00000581448 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
PLEKHM1-207ENST00000581448 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
PLEKHM1-207ENST00000581448 PTPRGP23470 1445 aa17.15■□□□□ 0.34
PLEKHM1-207ENST00000581448 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.34
PLEKHM1-207ENST00000581448 NLRP13Q86W25 1043 aa17.15■□□□□ 0.34
PLEKHM1-207ENST00000581448 NUP160Q12769 1436 aa17.15■□□□□ 0.34
PLEKHM1-207ENST00000581448 MS4A1P11836 297 aa17.14■□□□□ 0.33
PLEKHM1-207ENST00000581448 RALBP1Q15311 655 aa17.14■□□□□ 0.33
PLEKHM1-207ENST00000581448 NUP155O75694 1391 aa17.14■□□□□ 0.33
PLEKHM1-207ENST00000581448 ARHGEF11O15085 1522 aa17.13■□□□□ 0.33
PLEKHM1-207ENST00000581448 DAPK1P53355 1430 aa17.13■□□□□ 0.33
PLEKHM1-207ENST00000581448 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
PLEKHM1-207ENST00000581448 KIF14Q15058 1648 aa17.13■□□□□ 0.33
PLEKHM1-207ENST00000581448 BCORL1Q5H9F3 1711 aa17.13■□□□□ 0.33
PLEKHM1-207ENST00000581448 CCDC146Q8IYE0 955 aa17.13■□□□□ 0.33
PLEKHM1-207ENST00000581448 ABCC5O15440 1437 aa17.12■□□□□ 0.33
PLEKHM1-207ENST00000581448 ROCK2O75116 1388 aaKnown RBP17.12■□□□□ 0.33
PLEKHM1-207ENST00000581448 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
PLEKHM1-207ENST00000581448 PANK3Q9H999 370 aa17.11■□□□□ 0.33
PLEKHM1-207ENST00000581448 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
PLEKHM1-207ENST00000581448 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
PLEKHM1-207ENST00000581448 MIA2Q96PC5 1412 aa17.1■□□□□ 0.33
PLEKHM1-207ENST00000581448 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
PLEKHM1-207ENST00000581448 ATP10BO94823 1461 aa17.07■□□□□ 0.32
PLEKHM1-207ENST00000581448 TCOF1Q13428 1488 aaKnown RBP17.07■□□□□ 0.32
PLEKHM1-207ENST00000581448 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
PLEKHM1-207ENST00000581448 GZF1Q9H116 711 aaPredicted RBP17.06■□□□□ 0.32
PLEKHM1-207ENST00000581448 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
PLEKHM1-207ENST00000581448 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
PLEKHM1-207ENST00000581448 POGKQ9P215 609 aa17.06■□□□□ 0.32
PLEKHM1-207ENST00000581448 CHD1O14646 1710 aa17.06■□□□□ 0.32
PLEKHM1-207ENST00000581448 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
PLEKHM1-207ENST00000581448 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
PLEKHM1-207ENST00000581448 FAM161AQ3B820 660 aa17.05■□□□□ 0.32
PLEKHM1-207ENST00000581448 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
PLEKHM1-207ENST00000581448 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
PLEKHM1-207ENST00000581448 NEUROD2Q15784 382 aa17.04■□□□□ 0.32
PLEKHM1-207ENST00000581448 PDE3BQ13370 1112 aa17.04■□□□□ 0.32
PLEKHM1-207ENST00000581448 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
PLEKHM1-207ENST00000581448 GCC2Q8IWJ2 1684 aa17.02■□□□□ 0.32
PLEKHM1-207ENST00000581448 BCAR3O75815 825 aa17.02■□□□□ 0.31
PLEKHM1-207ENST00000581448 C8orf34Q49A92 452 aa17.02■□□□□ 0.31
PLEKHM1-207ENST00000581448 KIAA1107Q9UPP5 1409 aa17.02■□□□□ 0.31
PLEKHM1-207ENST00000581448 PZPP20742 1482 aa17■□□□□ 0.31
PLEKHM1-207ENST00000581448 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
PLEKHM1-207ENST00000581448 SEC24BO95487 1268 aa16.99■□□□□ 0.31
PLEKHM1-207ENST00000581448 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
PLEKHM1-207ENST00000581448 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.31
PLEKHM1-207ENST00000581448 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
PLEKHM1-207ENST00000581448 ANKRD30AQ9BXX3 1397 aa16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 KNSTRNQ9Y448 316 aa16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 ABCA8O94911 1581 aa16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 COG6Q9Y2V7 657 aa16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 ANKRD50Q9ULJ7 1429 aa16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 ROCK1Q13464 1354 aa16.95■□□□□ 0.3
PLEKHM1-207ENST00000581448 APAF1O14727 1248 aa16.94■□□□□ 0.3
PLEKHM1-207ENST00000581448 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
PLEKHM1-207ENST00000581448 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
PLEKHM1-207ENST00000581448 IGHDP01880 384 aa16.94■□□□□ 0.3
PLEKHM1-207ENST00000581448 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.94■□□□□ 0.3
PLEKHM1-207ENST00000581448 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
PLEKHM1-207ENST00000581448 NAP1L5Q96NT1 182 aaPredicted RBP16.93■□□□□ 0.3
PLEKHM1-207ENST00000581448 DISP3Q9P2K9 1392 aa16.92■□□□□ 0.3
PLEKHM1-207ENST00000581448 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
PLEKHM1-207ENST00000581448 UBE2Q2Q8WVN8 375 aa16.92■□□□□ 0.3
PLEKHM1-207ENST00000581448 CLUAP1Q96AJ1 413 aa16.92■□□□□ 0.3
PLEKHM1-207ENST00000581448 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
PLEKHM1-207ENST00000581448 C9orf84Q5VXU9 1444 aa16.91■□□□□ 0.3
PLEKHM1-207ENST00000581448 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
PLEKHM1-207ENST00000581448 KDM5CP41229 1560 aa16.91■□□□□ 0.3
PLEKHM1-207ENST00000581448 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
PLEKHM1-207ENST00000581448 TMF1P82094 1093 aa16.9■□□□□ 0.3
PLEKHM1-207ENST00000581448 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
PLEKHM1-207ENST00000581448 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
PLEKHM1-207ENST00000581448 RRAGDQ9NQL2 400 aaPredicted RBP16.89■□□□□ 0.29
PLEKHM1-207ENST00000581448 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
PLEKHM1-207ENST00000581448 CDC42BPAQ5VT25 1732 aa16.88■□□□□ 0.29
PLEKHM1-207ENST00000581448 PPP2R1AP30153 589 aa16.87■□□□□ 0.29
PLEKHM1-207ENST00000581448 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
PLEKHM1-207ENST00000581448 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
PLEKHM1-207ENST00000581448 ABCC10Q5T3U5 1492 aa16.87■□□□□ 0.29
PLEKHM1-207ENST00000581448 MBD5Q9P267 1494 aa16.85■□□□□ 0.29
PLEKHM1-207ENST00000581448 PANK2Q9BZ23 570 aa16.85■□□□□ 0.29
PLEKHM1-207ENST00000581448 TNNQ9UQP3 1299 aa16.85■□□□□ 0.29
PLEKHM1-207ENST00000581448 BECN1Q14457 450 aa16.84■□□□□ 0.29
PLEKHM1-207ENST00000581448 RALGAPBQ86X10 1494 aa16.84■□□□□ 0.29
PLEKHM1-207ENST00000581448 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.29
PLEKHM1-207ENST00000581448 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.29
PLEKHM1-207ENST00000581448 AFAP1Q8N556 730 aa16.82■□□□□ 0.28
PLEKHM1-207ENST00000581448 TESK2Q96S53 571 aa16.82■□□□□ 0.28
PLEKHM1-207ENST00000581448 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
PLEKHM1-207ENST00000581448 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
PLEKHM1-207ENST00000581448 UPF2Q9HAU5 1272 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms