RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 NCBP3Q53F19 620 aaKnown RBP4.28□□□□□ -1.72
CTC1-207ENST00000580299 ZC3H13Q5T200 1668 aaKnown RBP4.28□□□□□ -1.72
CTC1-207ENST00000580299 NPHP4O75161 1426 aaPredicted RBP4.28□□□□□ -1.72
CTC1-207ENST00000580299 ZMYM3Q14202 1370 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 SPATA31A6Q5VVP1 1343 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 KDM5DQ9BY66 1539 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 MED14O60244 1454 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 DCAF8L1A6NGE4 600 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 ANKLE2Q86XL3 938 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 COL16A1Q07092 1604 aaPredicted RBP4.27□□□□□ -1.73
CTC1-207ENST00000580299 RGS12O14924 1447 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 KIDINS220Q9ULH0 1771 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 NWD1Q149M9 1564 aa4.27□□□□□ -1.73
CTC1-207ENST00000580299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.27□□□□□ -1.73
CTC1-207ENST00000580299 ABCC1P33527 1531 aa4.26□□□□□ -1.73
CTC1-207ENST00000580299 MLH3Q9UHC1 1453 aa4.26□□□□□ -1.73
CTC1-207ENST00000580299 PLEKHD1A6NEE1 506 aa4.26□□□□□ -1.73
CTC1-207ENST00000580299 FGD6Q6ZV73 1430 aa4.26□□□□□ -1.73
CTC1-207ENST00000580299 CHD4Q14839 1912 aa4.26□□□□□ -1.73
CTC1-207ENST00000580299 ARHGAP5Q13017 1502 aa4.26□□□□□ -1.73
CTC1-207ENST00000580299 FAM135AQ9P2D6 1515 aa4.26□□□□□ -1.73
CTC1-207ENST00000580299 LRP6O75581 1613 aa4.25□□□□□ -1.73
CTC1-207ENST00000580299 PLCH2O75038 1416 aa4.25□□□□□ -1.73
CTC1-207ENST00000580299 HOXD11P31277 338 aaPredicted RBP4.25□□□□□ -1.73
CTC1-207ENST00000580299 EFCAB2Q5VUJ9 269 aa4.25□□□□□ -1.73
CTC1-207ENST00000580299 CCDC125Q86Z20 511 aa4.25□□□□□ -1.73
CTC1-207ENST00000580299 ADGBQ8N7X0 1667 aa4.25□□□□□ -1.73
CTC1-207ENST00000580299 SAMD9Q5K651 1589 aa4.24□□□□□ -1.73
CTC1-207ENST00000580299 UGGT1Q9NYU2 1555 aa4.24□□□□□ -1.73
CTC1-207ENST00000580299 NGLY1Q96IV0 654 aa4.24□□□□□ -1.73
CTC1-207ENST00000580299 RNF216Q9NWF9 866 aaPredicted RBP4.24□□□□□ -1.73
CTC1-207ENST00000580299 ATP7AQ04656 1500 aa4.24□□□□□ -1.73
CTC1-207ENST00000580299 EP400Q96L91 3159 aa4.24□□□□□ -1.73
CTC1-207ENST00000580299 NUP153P49790 1475 aaKnown RBP4.24□□□□□ -1.73
CTC1-207ENST00000580299 CDC42BPBQ9Y5S2 1711 aa4.24□□□□□ -1.73
CTC1-207ENST00000580299 RBM6P78332 1123 aaKnown RBP4.23□□□□□ -1.73
CTC1-207ENST00000580299 THEMISQ8N1K5 641 aaPredicted RBP4.23□□□□□ -1.73
CTC1-207ENST00000580299 TNRQ92752 1358 aa4.23□□□□□ -1.73
CTC1-207ENST00000580299 NLRP1Q9C000 1473 aa4.23□□□□□ -1.73
CTC1-207ENST00000580299 TIAM1Q13009 1591 aa4.23□□□□□ -1.73
CTC1-207ENST00000580299 KDM5AP29375 1690 aaKnown RBP4.22□□□□□ -1.73
CTC1-207ENST00000580299 AFF2P51816 1311 aa4.22□□□□□ -1.73
CTC1-207ENST00000580299 PREX2Q70Z35 1606 aa4.22□□□□□ -1.73
CTC1-207ENST00000580299 ABCC3O15438 1527 aa4.21□□□□□ -1.73
CTC1-207ENST00000580299 AHDC1Q5TGY3 1603 aaPredicted RBP4.21□□□□□ -1.73
CTC1-207ENST00000580299 SF3B2Q13435 895 aaKnown RBP4.21□□□□□ -1.74
CTC1-207ENST00000580299 PCDH10Q9P2E7 1040 aa4.21□□□□□ -1.74
CTC1-207ENST00000580299 PLXNC1O60486 1568 aa4.21□□□□□ -1.74
CTC1-207ENST00000580299 SPHKAPQ2M3C7 1700 aa4.21□□□□□ -1.74
CTC1-207ENST00000580299 UNC13BO14795 1591 aa4.2□□□□□ -1.74
CTC1-207ENST00000580299 MSH6P52701 1360 aa4.2□□□□□ -1.74
CTC1-207ENST00000580299 KCNA4P22459 653 aa4.2□□□□□ -1.74
CTC1-207ENST00000580299 C1QTNF8P60827 252 aa4.2□□□□□ -1.74
CTC1-207ENST00000580299 AFAP1Q8N556 730 aa4.2□□□□□ -1.74
CTC1-207ENST00000580299 UBR1Q8IWV7 1749 aa4.2□□□□□ -1.74
CTC1-207ENST00000580299 NPM3O75607 178 aaKnown RBP4.19□□□□□ -1.74
CTC1-207ENST00000580299 SLC34A2O95436 690 aa4.19□□□□□ -1.74
CTC1-207ENST00000580299 EHMT2Q96KQ7 1210 aa4.19□□□□□ -1.74
CTC1-207ENST00000580299 QTRT2Q9H974 415 aaKnown RBP4.19□□□□□ -1.74
CTC1-207ENST00000580299 MAP3K1Q13233 1512 aa4.19□□□□□ -1.74
CTC1-207ENST00000580299 BLMP54132 1417 aaPredicted RBP4.19□□□□□ -1.74
CTC1-207ENST00000580299 SAMD9LQ8IVG5 1584 aa4.19□□□□□ -1.74
CTC1-207ENST00000580299 INO80Q9ULG1 1556 aaPredicted RBP4.19□□□□□ -1.74
CTC1-207ENST00000580299 BRWD3Q6RI45 1802 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 PZPP20742 1482 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 NKTRP30414 1462 aaKnown RBP4.18□□□□□ -1.74
CTC1-207ENST00000580299 SCAF11Q99590 1463 aaKnown RBP4.18□□□□□ -1.74
CTC1-207ENST00000580299 TMEM94Q12767 1356 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 P3H3Q8IVL6 736 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 CFAP65Q6ZU64 1925 aaKnown RBP4.18□□□□□ -1.74
CTC1-207ENST00000580299 CLIP1P30622 1438 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 DIP2AQ14689 1571 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 RGPD1P0DJD0 1748 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 CDC42BPAQ5VT25 1732 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 MARF1Q9Y4F3 1742 aaKnown RBP4.18□□□□□ -1.74
CTC1-207ENST00000580299 A2MP01023 1474 aa4.18□□□□□ -1.74
CTC1-207ENST00000580299 PRDM15P57071 1507 aaPredicted RBP4.17□□□□□ -1.74
CTC1-207ENST00000580299 HRCP23327 699 aa4.17□□□□□ -1.74
CTC1-207ENST00000580299 CAMTA1Q9Y6Y1 1673 aa4.16□□□□□ -1.74
CTC1-207ENST00000580299 CEP350Q5VT06 3117 aa4.16□□□□□ -1.74
CTC1-207ENST00000580299 PSDA5PKW4 1024 aaPredicted RBP4.16□□□□□ -1.74
CTC1-207ENST00000580299 GGT6Q6P531 493 aa4.16□□□□□ -1.74
CTC1-207ENST00000580299 ZNF784Q8NCA9 323 aaPredicted RBP4.16□□□□□ -1.74
CTC1-207ENST00000580299 C8orf37Q96NL8 207 aa4.16□□□□□ -1.74
CTC1-207ENST00000580299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.16□□□□□ -1.74
CTC1-207ENST00000580299 SLAIN2Q9P270 581 aa4.16□□□□□ -1.74
CTC1-207ENST00000580299 BCL9LQ86UU0 1499 aa4.16□□□□□ -1.74
CTC1-207ENST00000580299 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.15□□□□□ -1.74
CTC1-207ENST00000580299 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.15□□□□□ -1.74
CTC1-207ENST00000580299 PROSER2Q86WR7 435 aaPredicted RBP4.15□□□□□ -1.75
CTC1-207ENST00000580299 PPP1R1BQ9UD71 204 aaPredicted RBP4.15□□□□□ -1.75
CTC1-207ENST00000580299 TRPC5Q9UL62 973 aaPredicted RBP4.15□□□□□ -1.75
CTC1-207ENST00000580299 CDK11AQ9UQ88 783 aaPredicted RBP4.15□□□□□ -1.75
CTC1-207ENST00000580299 CHD2O14647 1828 aaKnown RBP4.15□□□□□ -1.75
CTC1-207ENST00000580299 SPAG9O60271 1321 aaKnown RBP4.15□□□□□ -1.75
CTC1-207ENST00000580299 NINLQ9Y2I6 1382 aa4.14□□□□□ -1.75
CTC1-207ENST00000580299 MIA2Q96PC5 1412 aa4.14□□□□□ -1.75
CTC1-207ENST00000580299 ARHGAP23Q9P227 1491 aa4.14□□□□□ -1.75
CTC1-207ENST00000580299 GIGYF1O75420 1035 aaPredicted RBP4.14□□□□□ -1.75
CTC1-207ENST00000580299 BAG6P46379 1132 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms