RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 CEP152O94986 1710 aa13.91□□□□□ -0.18
SSH2-209ENST00000579954 ITGAEP38570 1179 aa13.91□□□□□ -0.18
SSH2-209ENST00000579954 KIF15Q9NS87 1388 aa13.91□□□□□ -0.18
SSH2-209ENST00000579954 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
SSH2-209ENST00000579954 ANKRD30AQ9BXX3 1397 aa13.9□□□□□ -0.18
SSH2-209ENST00000579954 LMTK3Q96Q04 1460 aa13.9□□□□□ -0.18
SSH2-209ENST00000579954 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.19
SSH2-209ENST00000579954 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
SSH2-209ENST00000579954 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
SSH2-209ENST00000579954 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
SSH2-209ENST00000579954 CFAP65Q6ZU64 1925 aaKnown RBP13.87□□□□□ -0.19
SSH2-209ENST00000579954 UHRF1BP1Q6BDS2 1440 aa13.87□□□□□ -0.19
SSH2-209ENST00000579954 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
SSH2-209ENST00000579954 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
SSH2-209ENST00000579954 ERBINQ96RT1 1412 aa13.86□□□□□ -0.19
SSH2-209ENST00000579954 FAM135AQ9P2D6 1515 aa13.85□□□□□ -0.19
SSH2-209ENST00000579954 HSPA2P54652 639 aa13.85□□□□□ -0.19
SSH2-209ENST00000579954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
SSH2-209ENST00000579954 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
SSH2-209ENST00000579954 CAMSAP1Q5T5Y3 1602 aa13.85□□□□□ -0.19
SSH2-209ENST00000579954 MROH1Q8NDA8 1641 aa13.84□□□□□ -0.19
SSH2-209ENST00000579954 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
SSH2-209ENST00000579954 NCOA1Q15788 1441 aa13.83□□□□□ -0.2
SSH2-209ENST00000579954 DEPDC5O75140 1603 aa13.82□□□□□ -0.2
SSH2-209ENST00000579954 NPATQ14207 1427 aa13.82□□□□□ -0.2
SSH2-209ENST00000579954 ABCC3O15438 1527 aa13.82□□□□□ -0.2
SSH2-209ENST00000579954 PRDM15P57071 1507 aaPredicted RBP13.82□□□□□ -0.2
SSH2-209ENST00000579954 KANK1Q14678 1352 aa13.82□□□□□ -0.2
SSH2-209ENST00000579954 ZNF142P52746 1687 aaPredicted RBP13.81□□□□□ -0.2
SSH2-209ENST00000579954 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
SSH2-209ENST00000579954 PZPP20742 1482 aa13.8□□□□□ -0.2
SSH2-209ENST00000579954 RRBP1Q9P2E9 1410 aaKnown RBP13.8□□□□□ -0.2
SSH2-209ENST00000579954 ANKRD50Q9ULJ7 1429 aa13.79□□□□□ -0.2
SSH2-209ENST00000579954 CEP170BQ9Y4F5 1589 aaPredicted RBP13.79□□□□□ -0.2
SSH2-209ENST00000579954 TNRQ92752 1358 aa13.77□□□□□ -0.21
SSH2-209ENST00000579954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSH2-209ENST00000579954 ROCK1Q13464 1354 aa13.76□□□□□ -0.21
SSH2-209ENST00000579954 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
SSH2-209ENST00000579954 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
SSH2-209ENST00000579954 UNC13BO14795 1591 aa13.75□□□□□ -0.21
SSH2-209ENST00000579954 FOXD1Q16676 465 aa13.74□□□□□ -0.21
SSH2-209ENST00000579954 GCC2Q8IWJ2 1684 aa13.74□□□□□ -0.21
SSH2-209ENST00000579954 SPATA31D1Q6ZQQ2 1576 aa13.73□□□□□ -0.21
SSH2-209ENST00000579954 A2ML1A8K2U0 1454 aa13.73□□□□□ -0.21
SSH2-209ENST00000579954 ERVK-7P63135 1459 aa13.73□□□□□ -0.21
SSH2-209ENST00000579954 POLR1AO95602 1720 aaPredicted RBP13.72□□□□□ -0.21
SSH2-209ENST00000579954 TET3O43151 1660 aa13.72□□□□□ -0.21
SSH2-209ENST00000579954 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
SSH2-209ENST00000579954 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
SSH2-209ENST00000579954 NLRP1Q9C000 1473 aa13.7□□□□□ -0.22
SSH2-209ENST00000579954 UGGT1Q9NYU2 1555 aa13.7□□□□□ -0.22
SSH2-209ENST00000579954 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
SSH2-209ENST00000579954 IQGAP3Q86VI3 1631 aa13.69□□□□□ -0.22
SSH2-209ENST00000579954 PIK3C2BO00750 1634 aa13.68□□□□□ -0.22
SSH2-209ENST00000579954 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
SSH2-209ENST00000579954 ARHGAP31Q2M1Z3 1444 aa13.67□□□□□ -0.22
SSH2-209ENST00000579954 E9PCH4 1651 aa13.67□□□□□ -0.22
SSH2-209ENST00000579954 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
SSH2-209ENST00000579954 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
SSH2-209ENST00000579954 NUP155O75694 1391 aa13.66□□□□□ -0.22
SSH2-209ENST00000579954 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
SSH2-209ENST00000579954 PLA2R1Q13018 1463 aa13.65□□□□□ -0.22
SSH2-209ENST00000579954 SYNMO15061 1565 aa13.65□□□□□ -0.22
SSH2-209ENST00000579954 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
SSH2-209ENST00000579954 NAIPQ13075 1403 aa13.64□□□□□ -0.23
SSH2-209ENST00000579954 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
SSH2-209ENST00000579954 TRIM52Q96A61 297 aa13.63□□□□□ -0.23
SSH2-209ENST00000579954 RPRD2Q5VT52 1461 aaKnown RBP13.62□□□□□ -0.23
SSH2-209ENST00000579954 PKD2Q13563 968 aa13.62□□□□□ -0.23
SSH2-209ENST00000579954 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
SSH2-209ENST00000579954 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
SSH2-209ENST00000579954 PTPRTO14522 1441 aa13.61□□□□□ -0.23
SSH2-209ENST00000579954 IQGAP1P46940 1657 aa13.6□□□□□ -0.23
SSH2-209ENST00000579954 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
SSH2-209ENST00000579954 NEURL4Q96JN8 1562 aa13.59□□□□□ -0.23
SSH2-209ENST00000579954 ANKLE2Q86XL3 938 aa13.59□□□□□ -0.23
SSH2-209ENST00000579954 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
SSH2-209ENST00000579954 NOS1P29475 1434 aa13.58□□□□□ -0.24
SSH2-209ENST00000579954 CHGAP10645 457 aaKnown RBP13.58□□□□□ -0.24
SSH2-209ENST00000579954 MSH5O43196 834 aa13.57□□□□□ -0.24
SSH2-209ENST00000579954 IDI1Q13907 227 aa13.56□□□□□ -0.24
SSH2-209ENST00000579954 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
SSH2-209ENST00000579954 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
SSH2-209ENST00000579954 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
SSH2-209ENST00000579954 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
SSH2-209ENST00000579954 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
SSH2-209ENST00000579954 KIF1BO60333 1816 aa13.54□□□□□ -0.24
SSH2-209ENST00000579954 SLIT1O75093 1534 aa13.54□□□□□ -0.24
SSH2-209ENST00000579954 TXNDC2Q86VQ3 553 aa13.53□□□□□ -0.24
SSH2-209ENST00000579954 BCANQ96GW7 911 aa13.53□□□□□ -0.24
SSH2-209ENST00000579954 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
SSH2-209ENST00000579954 ZNF335Q9H4Z2 1342 aaPredicted RBP13.53□□□□□ -0.24
SSH2-209ENST00000579954 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
SSH2-209ENST00000579954 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
SSH2-209ENST00000579954 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
SSH2-209ENST00000579954 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
SSH2-209ENST00000579954 SETD5Q9C0A6 1442 aa13.51□□□□□ -0.25
SSH2-209ENST00000579954 PPP1R15AO75807 674 aaPredicted RBP13.51□□□□□ -0.25
SSH2-209ENST00000579954 MED14O60244 1454 aa13.5□□□□□ -0.25
SSH2-209ENST00000579954 LTBP4Q8N2S1 1624 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms