RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 FAM135AQ9P2D6 1515 aa27.02■■□□□ 1.92
MSI2-210ENST00000579505 ANKRD50Q9ULJ7 1429 aa27.02■■□□□ 1.92
MSI2-210ENST00000579505 MROH2AA6NES4 1674 aa27■■□□□ 1.91
MSI2-210ENST00000579505 GGT6Q6P531 493 aa26.99■■□□□ 1.91
MSI2-210ENST00000579505 PPP6R1Q9UPN7 881 aa26.99■■□□□ 1.91
MSI2-210ENST00000579505 PRDM15P57071 1507 aaPredicted RBP26.99■■□□□ 1.91
MSI2-210ENST00000579505 CLTCQ00610 1675 aaKnown RBP26.98■■□□□ 1.91
MSI2-210ENST00000579505 CNTLNQ9NXG0 1405 aa26.98■■□□□ 1.91
MSI2-210ENST00000579505 PTPRMP28827 1452 aa26.97■■□□□ 1.91
MSI2-210ENST00000579505 ZC3H13Q5T200 1668 aaKnown RBP26.97■■□□□ 1.91
MSI2-210ENST00000579505 HFM1A2PYH4 1435 aa26.97■■□□□ 1.91
MSI2-210ENST00000579505 NAIPQ13075 1403 aa26.96■■□□□ 1.91
MSI2-210ENST00000579505 KDM5DQ9BY66 1539 aa26.95■■□□□ 1.91
MSI2-210ENST00000579505 UNC13BO14795 1591 aa26.94■■□□□ 1.9
MSI2-210ENST00000579505 C3P01024 1663 aa26.92■■□□□ 1.9
MSI2-210ENST00000579505 CEP152O94986 1710 aa26.91■■□□□ 1.9
MSI2-210ENST00000579505 ESF1Q9H501 851 aaKnown RBP26.91■■□□□ 1.9
MSI2-210ENST00000579505 VWDEQ8N2E2 1590 aa26.91■■□□□ 1.9
MSI2-210ENST00000579505 ABCC3O15438 1527 aa26.9■■□□□ 1.9
MSI2-210ENST00000579505 WASHC2CQ9Y4E1 1318 aa26.86■■□□□ 1.89
MSI2-210ENST00000579505 CAMSAP1Q5T5Y3 1602 aa26.85■■□□□ 1.89
MSI2-210ENST00000579505 KANK1Q14678 1352 aa26.84■■□□□ 1.89
MSI2-210ENST00000579505 LMTK2Q8IWU2 1503 aa26.84■■□□□ 1.89
MSI2-210ENST00000579505 ZMYM3Q14202 1370 aa26.84■■□□□ 1.89
MSI2-210ENST00000579505 IQGAP3Q86VI3 1631 aa26.83■■□□□ 1.88
MSI2-210ENST00000579505 ACIN1Q9UKV3 1341 aaKnown RBP26.81■■□□□ 1.88
MSI2-210ENST00000579505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.8■■□□□ 1.881e-7■□□□□ 11.2
MSI2-210ENST00000579505 PZPP20742 1482 aa26.78■■□□□ 1.88
MSI2-210ENST00000579505 TET3O43151 1660 aa26.78■■□□□ 1.88
MSI2-210ENST00000579505 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
MSI2-210ENST00000579505 SETD5Q9C0A6 1442 aa26.76■■□□□ 1.87
MSI2-210ENST00000579505 CEBPAP49715 358 aaPredicted RBP26.76■■□□□ 1.87
MSI2-210ENST00000579505 EFCAB6Q5THR3 1501 aa26.75■■□□□ 1.87
MSI2-210ENST00000579505 ARHGAP31Q2M1Z3 1444 aa26.75■■□□□ 1.87
MSI2-210ENST00000579505 TRIM26Q12899 539 aaPredicted RBP26.75■■□□□ 1.87
MSI2-210ENST00000579505 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
MSI2-210ENST00000579505 NPATQ14207 1427 aa26.74■■□□□ 1.87
MSI2-210ENST00000579505 NUP155O75694 1391 aa26.72■■□□□ 1.87
MSI2-210ENST00000579505 PREX1Q8TCU6 1659 aa26.72■■□□□ 1.87
MSI2-210ENST00000579505 PLPPR3Q6T4P5 718 aa26.71■■□□□ 1.87
MSI2-210ENST00000579505 SPATA31D1Q6ZQQ2 1576 aa26.69■■□□□ 1.86
MSI2-210ENST00000579505 E9PCH4 1651 aa26.68■■□□□ 1.86
MSI2-210ENST00000579505 CFAP65Q6ZU64 1925 aaKnown RBP26.68■■□□□ 1.86
MSI2-210ENST00000579505 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
MSI2-210ENST00000579505 RAB3GAP2Q9H2M9 1393 aa26.67■■□□□ 1.86
MSI2-210ENST00000579505 ERVK-7P63135 1459 aa26.66■■□□□ 1.86
MSI2-210ENST00000579505 MYO3AQ8NEV4 1616 aa26.65■■□□□ 1.86
MSI2-210ENST00000579505 FBXO31Q5XUX0 539 aaPredicted RBP26.63■■□□□ 1.85
MSI2-210ENST00000579505 ZNF142P52746 1687 aaPredicted RBP26.61■■□□□ 1.85
MSI2-210ENST00000579505 HRCP23327 699 aa26.6■■□□□ 1.85
MSI2-210ENST00000579505 TRIM52Q96A61 297 aa26.6■■□□□ 1.85
MSI2-210ENST00000579505 TNRQ92752 1358 aa26.59■■□□□ 1.85
MSI2-210ENST00000579505 UHRF1BP1Q6BDS2 1440 aa26.59■■□□□ 1.85
MSI2-210ENST00000579505 LMTK3Q96Q04 1460 aa26.59■■□□□ 1.85
MSI2-210ENST00000579505 NOS1P29475 1434 aa26.57■■□□□ 1.84
MSI2-210ENST00000579505 SYNMO15061 1565 aa26.57■■□□□ 1.84
MSI2-210ENST00000579505 CEP170BQ9Y4F5 1589 aaPredicted RBP26.55■■□□□ 1.84
MSI2-210ENST00000579505 SPHKAPQ2M3C7 1700 aa26.55■■□□□ 1.84
MSI2-210ENST00000579505 NLRP1Q9C000 1473 aa26.55■■□□□ 1.84
MSI2-210ENST00000579505 A2ML1A8K2U0 1454 aa26.51■■□□□ 1.83
MSI2-210ENST00000579505 SLC4A1APQ9BWU0 796 aaKnown RBP26.51■■□□□ 1.83
MSI2-210ENST00000579505 PIK3C2BO00750 1634 aa26.5■■□□□ 1.83
MSI2-210ENST00000579505 PTPRTO14522 1441 aa26.48■■□□□ 1.83
MSI2-210ENST00000579505 MPHOSPH9Q99550 1183 aa26.48■■□□□ 1.83
MSI2-210ENST00000579505 KDM5AP29375 1690 aaKnown RBP26.47■■□□□ 1.83
MSI2-210ENST00000579505 PKD2Q13563 968 aa26.47■■□□□ 1.83
MSI2-210ENST00000579505 UBR1Q8IWV7 1749 aa26.46■■□□□ 1.83
MSI2-210ENST00000579505 TRPM2O94759 1503 aa26.45■■□□□ 1.83
MSI2-210ENST00000579505 UGGT1Q9NYU2 1555 aa26.44■■□□□ 1.82
MSI2-210ENST00000579505 SLC52A1Q9NWF4 448 aa26.42■■□□□ 1.82
MSI2-210ENST00000579505 PLA2R1Q13018 1463 aa26.41■■□□□ 1.82
MSI2-210ENST00000579505 ADGRB3O60242 1522 aa26.39■■□□□ 1.82
MSI2-210ENST00000579505 IDI1Q13907 227 aa26.39■■□□□ 1.82
MSI2-210ENST00000579505 CLTCL1P53675 1640 aa26.39■■□□□ 1.81
MSI2-210ENST00000579505 HSPA2P54652 639 aa26.37■■□□□ 1.81
MSI2-210ENST00000579505 MYO5BQ9ULV0 1848 aa26.37■■□□□ 1.81
MSI2-210ENST00000579505 TMEM131LA2VDJ0 1609 aa26.36■■□□□ 1.81
MSI2-210ENST00000579505 STRCQ7RTU9 1775 aa26.35■■□□□ 1.81
MSI2-210ENST00000579505 FOXD1Q16676 465 aa26.34■■□□□ 1.81
MSI2-210ENST00000579505 KIF1BO60333 1816 aa26.33■■□□□ 1.81
MSI2-210ENST00000579505 THEMISQ8N1K5 641 aaPredicted RBP26.33■■□□□ 1.81
MSI2-210ENST00000579505 PCGF6Q9BYE7 350 aa26.33■■□□□ 1.81
MSI2-210ENST00000579505 POLR1AO95602 1720 aaPredicted RBP26.32■■□□□ 1.8
MSI2-210ENST00000579505 SLIT1O75093 1534 aa26.3■■□□□ 1.8
MSI2-210ENST00000579505 ARHGAP23Q9P227 1491 aa26.29■■□□□ 1.8
MSI2-210ENST00000579505 STAG3Q9UJ98 1225 aa26.27■■□□□ 1.8
MSI2-210ENST00000579505 CCDC144AA2RUR9 1427 aa26.26■■□□□ 1.79
MSI2-210ENST00000579505 ANKRD30BQ9BXX2 1392 aa26.25■■□□□ 1.79
MSI2-210ENST00000579505 TMEM2Q9UHN6 1383 aa26.24■■□□□ 1.79
MSI2-210ENST00000579505 NEURL4Q96JN8 1562 aa26.23■■□□□ 1.79
MSI2-210ENST00000579505 DHX57Q6P158 1386 aaKnown RBP26.2■■□□□ 1.79
MSI2-210ENST00000579505 ZFYVE9O95405 1425 aa26.2■■□□□ 1.78
MSI2-210ENST00000579505 SCAF11Q99590 1463 aaKnown RBP26.19■■□□□ 1.78
MSI2-210ENST00000579505 CHGAP10645 457 aaKnown RBP26.19■■□□□ 1.78
MSI2-210ENST00000579505 MED14O60244 1454 aa26.18■■□□□ 1.78
MSI2-210ENST00000579505 ANKLE2Q86XL3 938 aa26.18■■□□□ 1.78
MSI2-210ENST00000579505 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
MSI2-210ENST00000579505 IQGAP1P46940 1657 aa26.15■■□□□ 1.78
MSI2-210ENST00000579505 SPATA31E1Q6ZUB1 1445 aa26.15■■□□□ 1.78
MSI2-210ENST00000579505 RIMS2Q9UQ26 1411 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms