RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 TNRQ92752 1358 aa25.78■■□□□ 1.72
IFT20-209ENST00000579419 ALKQ9UM73 1620 aa25.77■■□□□ 1.72
IFT20-209ENST00000579419 ADGBQ8N7X0 1667 aa25.75■■□□□ 1.71
IFT20-209ENST00000579419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.75■■□□□ 1.71
IFT20-209ENST00000579419 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
IFT20-209ENST00000579419 VWDEQ8N2E2 1590 aa25.74■■□□□ 1.71
IFT20-209ENST00000579419 MBD5Q9P267 1494 aa25.74■■□□□ 1.71
IFT20-209ENST00000579419 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
IFT20-209ENST00000579419 POLR1AO95602 1720 aaPredicted RBP25.74■■□□□ 1.71
IFT20-209ENST00000579419 DHX29Q7Z478 1369 aaKnown RBP25.73■■□□□ 1.71
IFT20-209ENST00000579419 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
IFT20-209ENST00000579419 PZPP20742 1482 aa25.7■■□□□ 1.7
IFT20-209ENST00000579419 KIF3BO15066 747 aa25.69■■□□□ 1.7
IFT20-209ENST00000579419 MTUS2Q5JR59 1369 aa25.69■■□□□ 1.7
IFT20-209ENST00000579419 RTEL1-TNFRSF6BF6WH68 1400 aa25.68■■□□□ 1.7
IFT20-209ENST00000579419 TIAM1Q13009 1591 aa25.68■■□□□ 1.7
IFT20-209ENST00000579419 NPHP4O75161 1426 aaPredicted RBP25.67■■□□□ 1.7
IFT20-209ENST00000579419 KDM5DQ9BY66 1539 aa25.66■■□□□ 1.7
IFT20-209ENST00000579419 MIA2Q96PC5 1412 aa25.64■■□□□ 1.7
IFT20-209ENST00000579419 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
IFT20-209ENST00000579419 THEMISQ8N1K5 641 aaPredicted RBP25.63■■□□□ 1.69
IFT20-209ENST00000579419 MED14O60244 1454 aa25.63■■□□□ 1.69
IFT20-209ENST00000579419 UGGT1Q9NYU2 1555 aa25.61■■□□□ 1.69
IFT20-209ENST00000579419 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
IFT20-209ENST00000579419 LRRC7Q96NW7 1537 aa25.59■■□□□ 1.69
IFT20-209ENST00000579419 FAM135AQ9P2D6 1515 aa25.58■■□□□ 1.69
IFT20-209ENST00000579419 DEPDC5O75140 1603 aa25.57■■□□□ 1.68
IFT20-209ENST00000579419 RGS17Q9UGC6 210 aaPredicted RBP25.57■■□□□ 1.68
IFT20-209ENST00000579419 STRCP1A6NGW2 1772 aa25.56■■□□□ 1.68
IFT20-209ENST00000579419 CCDC141Q6ZP82 1450 aa25.56■■□□□ 1.68
IFT20-209ENST00000579419 EHBP1L1Q8N3D4 1523 aa25.54■■□□□ 1.68
IFT20-209ENST00000579419 IQGAP1P46940 1657 aa25.54■■□□□ 1.68
IFT20-209ENST00000579419 CEP162Q5TB80 1403 aa25.54■■□□□ 1.68
IFT20-209ENST00000579419 CAMSAP2Q08AD1 1489 aa25.51■■□□□ 1.67
IFT20-209ENST00000579419 RNF17Q9BXT8 1623 aaKnown RBP25.5■■□□□ 1.67
IFT20-209ENST00000579419 SYNMO15061 1565 aa25.46■■□□□ 1.67
IFT20-209ENST00000579419 ABCC3O15438 1527 aa25.44■■□□□ 1.66
IFT20-209ENST00000579419 ERVK-7P63135 1459 aa25.43■■□□□ 1.66
IFT20-209ENST00000579419 NCOA2Q15596 1464 aa25.43■■□□□ 1.66
IFT20-209ENST00000579419 RSPH4AQ5TD94 716 aa25.42■■□□□ 1.66
IFT20-209ENST00000579419 ZC3H13Q5T200 1668 aaKnown RBP25.42■■□□□ 1.66
IFT20-209ENST00000579419 LTKP29376 864 aa25.39■■□□□ 1.66
IFT20-209ENST00000579419 TSPY4P0CV99 314 aa25.38■■□□□ 1.65
IFT20-209ENST00000579419 TSPY10P0CW01 314 aa25.38■■□□□ 1.65
IFT20-209ENST00000579419 POTEAQ6S8J7 498 aa25.38■■□□□ 1.65
IFT20-209ENST00000579419 SCAF11Q99590 1463 aaKnown RBP25.37■■□□□ 1.65
IFT20-209ENST00000579419 ARHGEF5Q12774 1597 aa25.36■■□□□ 1.65
IFT20-209ENST00000579419 TXNDC2Q86VQ3 553 aa25.34■■□□□ 1.65
IFT20-209ENST00000579419 MROH1Q8NDA8 1641 aa25.34■■□□□ 1.65
IFT20-209ENST00000579419 UBR1Q8IWV7 1749 aa25.33■■□□□ 1.65
IFT20-209ENST00000579419 ARHGAP23Q9P227 1491 aa25.32■■□□□ 1.64
IFT20-209ENST00000579419 XIRP1Q702N8 1843 aaKnown RBP25.3■■□□□ 1.64
IFT20-209ENST00000579419 FAM135BQ49AJ0 1406 aa25.29■■□□□ 1.64
IFT20-209ENST00000579419 SLIT1O75093 1534 aa25.28■■□□□ 1.64
IFT20-209ENST00000579419 CEP152O94986 1710 aa25.26■■□□□ 1.63
IFT20-209ENST00000579419 MAST1Q9Y2H9 1570 aa25.26■■□□□ 1.63
IFT20-209ENST00000579419 RBM33Q96EV2 1170 aaKnown RBP25.25■■□□□ 1.63
IFT20-209ENST00000579419 TMEM94Q12767 1356 aa25.25■■□□□ 1.63
IFT20-209ENST00000579419 EIF2AK4Q9P2K8 1649 aaKnown RBP25.24■■□□□ 1.63
IFT20-209ENST00000579419 EID1Q9Y6B2 187 aa25.22■■□□□ 1.63
IFT20-209ENST00000579419 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
IFT20-209ENST00000579419 TMEM2Q9UHN6 1383 aa25.19■■□□□ 1.62
IFT20-209ENST00000579419 MAP3K1Q13233 1512 aa25.19■■□□□ 1.62
IFT20-209ENST00000579419 ARHGAP31Q2M1Z3 1444 aa25.18■■□□□ 1.62
IFT20-209ENST00000579419 ROBO1Q9Y6N7 1651 aa25.17■■□□□ 1.62
IFT20-209ENST00000579419 PIK3C2BO00750 1634 aa25.16■■□□□ 1.62
IFT20-209ENST00000579419 SETD1AO15047 1707 aaKnown RBP25.16■■□□□ 1.62
IFT20-209ENST00000579419 KCNA6P17658 529 aa25.16■■□□□ 1.62
IFT20-209ENST00000579419 SLC26A8Q96RN1 970 aa25.15■■□□□ 1.62
IFT20-209ENST00000579419 DUOX2Q9NRD8 1548 aa25.14■■□□□ 1.62
IFT20-209ENST00000579419 PROSER2Q86WR7 435 aaPredicted RBP25.14■■□□□ 1.62
IFT20-209ENST00000579419 LRRC9Q6ZRR7 1453 aa25.14■■□□□ 1.61
IFT20-209ENST00000579419 PRDM15P57071 1507 aaPredicted RBP25.13■■□□□ 1.61
IFT20-209ENST00000579419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.12■■□□□ 1.613e-6■■□□□ 11.7
IFT20-209ENST00000579419 STAG3Q9UJ98 1225 aa25.12■■□□□ 1.61
IFT20-209ENST00000579419 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
IFT20-209ENST00000579419 KANK4Q5T7N3 995 aaPredicted RBP25.1■■□□□ 1.61
IFT20-209ENST00000579419 IDI1Q13907 227 aa25.09■■□□□ 1.61
IFT20-209ENST00000579419 TET3O43151 1660 aa25.09■■□□□ 1.61
IFT20-209ENST00000579419 EFCAB6Q5THR3 1501 aa25.08■■□□□ 1.61
IFT20-209ENST00000579419 RRP7BPQ9NSQ0 103 aa25.08■■□□□ 1.61
IFT20-209ENST00000579419 MYOM3Q5VTT5 1437 aa25.07■■□□□ 1.6
IFT20-209ENST00000579419 ERBINQ96RT1 1412 aa25.05■■□□□ 1.6
IFT20-209ENST00000579419 JCADQ9P266 1359 aa25.04■■□□□ 1.6
IFT20-209ENST00000579419 SLAIN2Q9P270 581 aa25.03■■□□□ 1.6
IFT20-209ENST00000579419 ABCC5O15440 1437 aa25.03■■□□□ 1.6
IFT20-209ENST00000579419 NWD1Q149M9 1564 aa25.02■■□□□ 1.6
IFT20-209ENST00000579419 MSH6P52701 1360 aa25.02■■□□□ 1.6
IFT20-209ENST00000579419 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
IFT20-209ENST00000579419 PHLPP1O60346 1717 aa25■■□□□ 1.59
IFT20-209ENST00000579419 LRP6O75581 1613 aa25■■□□□ 1.59
IFT20-209ENST00000579419 VPS8Q8N3P4 1428 aa24.99■■□□□ 1.59
IFT20-209ENST00000579419 UPF1Q92900 1129 aaKnown RBP eCLIP24.99■■□□□ 1.59
IFT20-209ENST00000579419 BCANQ96GW7 911 aa24.98■■□□□ 1.59
IFT20-209ENST00000579419 KANK1Q14678 1352 aa24.97■■□□□ 1.59
IFT20-209ENST00000579419 TRIM52Q96A61 297 aa24.96■■□□□ 1.59
IFT20-209ENST00000579419 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
IFT20-209ENST00000579419 ADGRB3O60242 1522 aa24.96■■□□□ 1.59
IFT20-209ENST00000579419 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
IFT20-209ENST00000579419 NOS1P29475 1434 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms