RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 MADDQ8WXG6 1647 aa31.63■■■□□ 2.65
SCO1-204ENST00000579396 PTPRMP28827 1452 aa31.61■■■□□ 2.65
SCO1-204ENST00000579396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.6■■■□□ 2.653e-7■□□□□ 9.7
SCO1-204ENST00000579396 KANK1Q14678 1352 aa31.57■■■□□ 2.64
SCO1-204ENST00000579396 FER1L4A9Z1Z3 1794 aa31.57■■■□□ 2.64
SCO1-204ENST00000579396 ZMYM3Q14202 1370 aa31.56■■■□□ 2.64
SCO1-204ENST00000579396 FAM135AQ9P2D6 1515 aa31.54■■■□□ 2.64
SCO1-204ENST00000579396 RIMS1Q86UR5 1692 aaKnown RBP31.54■■■□□ 2.64
SCO1-204ENST00000579396 RNF17Q9BXT8 1623 aaKnown RBP31.54■■■□□ 2.64
SCO1-204ENST00000579396 HFM1A2PYH4 1435 aa31.54■■■□□ 2.64
SCO1-204ENST00000579396 NAIPQ13075 1403 aa31.54■■■□□ 2.64
SCO1-204ENST00000579396 CEBPAP49715 358 aaPredicted RBP31.53■■■□□ 2.64
SCO1-204ENST00000579396 PLPPR3Q6T4P5 718 aa31.53■■■□□ 2.64
SCO1-204ENST00000579396 KDM5DQ9BY66 1539 aa31.49■■■□□ 2.63
SCO1-204ENST00000579396 ACIN1Q9UKV3 1341 aaKnown RBP31.46■■■□□ 2.63
SCO1-204ENST00000579396 PRDM15P57071 1507 aaPredicted RBP31.44■■■□□ 2.62
SCO1-204ENST00000579396 DEPDC5O75140 1603 aa31.44■■■□□ 2.62
SCO1-204ENST00000579396 MROH1Q8NDA8 1641 aa31.44■■■□□ 2.62
SCO1-204ENST00000579396 MROH2AA6NES4 1674 aa31.44■■■□□ 2.62
SCO1-204ENST00000579396 CLTCQ00610 1675 aaKnown RBP31.44■■■□□ 2.62
SCO1-204ENST00000579396 NUP155O75694 1391 aa31.42■■■□□ 2.62
SCO1-204ENST00000579396 ABCC3O15438 1527 aa31.41■■■□□ 2.62
SCO1-204ENST00000579396 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
SCO1-204ENST00000579396 SETD5Q9C0A6 1442 aa31.39■■■□□ 2.62
SCO1-204ENST00000579396 ZC3H13Q5T200 1668 aaKnown RBP31.38■■■□□ 2.61
SCO1-204ENST00000579396 GCC2Q8IWJ2 1684 aa31.38■■■□□ 2.61
SCO1-204ENST00000579396 TRIM52Q96A61 297 aa31.37■■■□□ 2.61
SCO1-204ENST00000579396 C3P01024 1663 aa31.36■■■□□ 2.61
SCO1-204ENST00000579396 VWDEQ8N2E2 1590 aa31.36■■■□□ 2.61
SCO1-204ENST00000579396 NPATQ14207 1427 aa31.36■■■□□ 2.61
SCO1-204ENST00000579396 LMTK2Q8IWU2 1503 aa31.35■■■□□ 2.61
SCO1-204ENST00000579396 UNC13BO14795 1591 aa31.34■■■□□ 2.61
SCO1-204ENST00000579396 PZPP20742 1482 aa31.34■■■□□ 2.61
SCO1-204ENST00000579396 ARHGAP31Q2M1Z3 1444 aa31.34■■■□□ 2.61
SCO1-204ENST00000579396 FBXO31Q5XUX0 539 aaPredicted RBP31.33■■■□□ 2.61
SCO1-204ENST00000579396 HRCP23327 699 aa31.32■■■□□ 2.6
SCO1-204ENST00000579396 SETD1BQ9UPS6 1966 aaKnown RBP31.32■■■□□ 2.6
SCO1-204ENST00000579396 CEP152O94986 1710 aa31.28■■■□□ 2.6
SCO1-204ENST00000579396 CAMSAP1Q5T5Y3 1602 aa31.25■■■□□ 2.59
SCO1-204ENST00000579396 TNRQ92752 1358 aa31.24■■■□□ 2.59
SCO1-204ENST00000579396 RAB3GAP2Q9H2M9 1393 aa31.24■■■□□ 2.59
SCO1-204ENST00000579396 IQGAP3Q86VI3 1631 aa31.23■■■□□ 2.59
SCO1-204ENST00000579396 SLC4A1APQ9BWU0 796 aaKnown RBP31.22■■■□□ 2.59
SCO1-204ENST00000579396 UHRF1BP1Q6BDS2 1440 aa31.22■■■□□ 2.59
SCO1-204ENST00000579396 RPRD2Q5VT52 1461 aaKnown RBP31.21■■■□□ 2.59
SCO1-204ENST00000579396 ILDR1Q86SU0 546 aaPredicted RBP31.21■■■□□ 2.59
SCO1-204ENST00000579396 TET3O43151 1660 aa31.19■■■□□ 2.58
SCO1-204ENST00000579396 EFCAB6Q5THR3 1501 aa31.19■■■□□ 2.58
SCO1-204ENST00000579396 ERVK-7P63135 1459 aa31.18■■■□□ 2.58
SCO1-204ENST00000579396 MPHOSPH9Q99550 1183 aa31.16■■■□□ 2.58
SCO1-204ENST00000579396 SPATA31D1Q6ZQQ2 1576 aa31.16■■■□□ 2.58
SCO1-204ENST00000579396 PKD2Q13563 968 aa31.14■■■□□ 2.58
SCO1-204ENST00000579396 SLC52A1Q9NWF4 448 aa31.14■■■□□ 2.58
SCO1-204ENST00000579396 NOS1P29475 1434 aa31.12■■■□□ 2.57
SCO1-204ENST00000579396 PREX1Q8TCU6 1659 aa31.12■■■□□ 2.57
SCO1-204ENST00000579396 CFAP65Q6ZU64 1925 aaKnown RBP31.12■■■□□ 2.57
SCO1-204ENST00000579396 LMTK3Q96Q04 1460 aa31.11■■■□□ 2.57
SCO1-204ENST00000579396 NLRP1Q9C000 1473 aa31.11■■■□□ 2.57
SCO1-204ENST00000579396 IDI1Q13907 227 aa31.07■■■□□ 2.56
SCO1-204ENST00000579396 THEMISQ8N1K5 641 aaPredicted RBP31.07■■■□□ 2.56
SCO1-204ENST00000579396 HSPA2P54652 639 aa31.06■■■□□ 2.56
SCO1-204ENST00000579396 A2ML1A8K2U0 1454 aa31.06■■■□□ 2.56
SCO1-204ENST00000579396 E9PCH4 1651 aa31.05■■■□□ 2.56
SCO1-204ENST00000579396 STAG3Q9UJ98 1225 aa31.03■■■□□ 2.56
SCO1-204ENST00000579396 MYO3AQ8NEV4 1616 aa31.02■■■□□ 2.56
SCO1-204ENST00000579396 PTPRTO14522 1441 aa31■■■□□ 2.55
SCO1-204ENST00000579396 CEP170BQ9Y4F5 1589 aaPredicted RBP30.99■■■□□ 2.55
SCO1-204ENST00000579396 FOXD1Q16676 465 aa30.96■■■□□ 2.55
SCO1-204ENST00000579396 SYNMO15061 1565 aa30.96■■■□□ 2.55
SCO1-204ENST00000579396 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.55
SCO1-204ENST00000579396 UGGT1Q9NYU2 1555 aa30.95■■■□□ 2.54
SCO1-204ENST00000579396 ZNF142P52746 1687 aaPredicted RBP30.94■■■□□ 2.54
SCO1-204ENST00000579396 CHGAP10645 457 aaKnown RBP30.91■■■□□ 2.54
SCO1-204ENST00000579396 ANKLE2Q86XL3 938 aa30.9■■■□□ 2.54
SCO1-204ENST00000579396 DMRT2Q9Y5R5 561 aa30.89■■■□□ 2.54
SCO1-204ENST00000579396 PLA2R1Q13018 1463 aa30.89■■■□□ 2.53
SCO1-204ENST00000579396 HDGFP51858 240 aaKnown RBP30.87■■■□□ 2.53
SCO1-204ENST00000579396 SPHKAPQ2M3C7 1700 aa30.87■■■□□ 2.53
SCO1-204ENST00000579396 TRPM2O94759 1503 aa30.85■■■□□ 2.53
SCO1-204ENST00000579396 PIK3C2BO00750 1634 aa30.84■■■□□ 2.53
SCO1-204ENST00000579396 FBXO41Q8TF61 875 aa30.84■■■□□ 2.53
SCO1-204ENST00000579396 EID1Q9Y6B2 187 aa30.84■■■□□ 2.53
SCO1-204ENST00000579396 NCKAP5LQ9HCH0 1330 aa30.82■■■□□ 2.52
SCO1-204ENST00000579396 KDM5AP29375 1690 aaKnown RBP30.81■■■□□ 2.52
SCO1-204ENST00000579396 TXNDC2Q86VQ3 553 aa30.81■■■□□ 2.52
SCO1-204ENST00000579396 UBR1Q8IWV7 1749 aa30.81■■■□□ 2.52
SCO1-204ENST00000579396 TMEM2Q9UHN6 1383 aa30.8■■■□□ 2.52
SCO1-204ENST00000579396 CCDC144AA2RUR9 1427 aa30.8■■■□□ 2.52
SCO1-204ENST00000579396 ADGRB3O60242 1522 aa30.78■■■□□ 2.52
SCO1-204ENST00000579396 ANKRD30BQ9BXX2 1392 aa30.78■■■□□ 2.52
SCO1-204ENST00000579396 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.77■■■□□ 2.52
SCO1-204ENST00000579396 SLIT1O75093 1534 aa30.75■■■□□ 2.51
SCO1-204ENST00000579396 ZNF326Q5BKZ1 582 aaKnown RBP30.75■■■□□ 2.51
SCO1-204ENST00000579396 TMEM131LA2VDJ0 1609 aa30.75■■■□□ 2.51
SCO1-204ENST00000579396 ARHGAP23Q9P227 1491 aa30.75■■■□□ 2.51
SCO1-204ENST00000579396 LTKP29376 864 aa30.74■■■□□ 2.51
SCO1-204ENST00000579396 CLTCL1P53675 1640 aa30.73■■■□□ 2.51
SCO1-204ENST00000579396 STRCQ7RTU9 1775 aa30.71■■■□□ 2.51
SCO1-204ENST00000579396 RPGRIP1LQ68CZ1 1315 aa30.7■■■□□ 2.5
SCO1-204ENST00000579396 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms