RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ANKRD30AQ9BXX3 1397 aa26.8■■□□□ 1.88
ITGB4-205ENST00000579211 KIF15Q9NS87 1388 aa26.8■■□□□ 1.88
ITGB4-205ENST00000579211 LMTK3Q96Q04 1460 aa26.79■■□□□ 1.88
ITGB4-205ENST00000579211 WASHC2CQ9Y4E1 1318 aa26.78■■□□□ 1.88
ITGB4-205ENST00000579211 RNF17Q9BXT8 1623 aaKnown RBP26.76■■□□□ 1.87
ITGB4-205ENST00000579211 KDM5DQ9BY66 1539 aa26.75■■□□□ 1.87
ITGB4-205ENST00000579211 CFAP65Q6ZU64 1925 aaKnown RBP26.75■■□□□ 1.87
ITGB4-205ENST00000579211 UHRF1BP1Q6BDS2 1440 aa26.74■■□□□ 1.87
ITGB4-205ENST00000579211 FAM135AQ9P2D6 1515 aa26.72■■□□□ 1.87
ITGB4-205ENST00000579211 ITGAEP38570 1179 aa26.72■■□□□ 1.87
ITGB4-205ENST00000579211 HSPA2P54652 639 aa26.72■■□□□ 1.87
ITGB4-205ENST00000579211 ZC3H13Q5T200 1668 aaKnown RBP26.71■■□□□ 1.87
ITGB4-205ENST00000579211 ERBINQ96RT1 1412 aa26.71■■□□□ 1.87
ITGB4-205ENST00000579211 CEP152O94986 1710 aa26.7■■□□□ 1.87
ITGB4-205ENST00000579211 NCOA1Q15788 1441 aa26.69■■□□□ 1.86
ITGB4-205ENST00000579211 NPATQ14207 1427 aa26.68■■□□□ 1.86
ITGB4-205ENST00000579211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.67■■□□□ 1.86
ITGB4-205ENST00000579211 ADGRL2O95490 1459 aa26.67■■□□□ 1.86
ITGB4-205ENST00000579211 PTPRKQ15262 1439 aa26.64■■□□□ 1.85
ITGB4-205ENST00000579211 KANK1Q14678 1352 aa26.63■■□□□ 1.85
ITGB4-205ENST00000579211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.63■■□□□ 1.85
ITGB4-205ENST00000579211 MROH1Q8NDA8 1641 aa26.62■■□□□ 1.85
ITGB4-205ENST00000579211 MYO3AQ8NEV4 1616 aa26.62■■□□□ 1.85
ITGB4-205ENST00000579211 CAMSAP1Q5T5Y3 1602 aa26.61■■□□□ 1.85
ITGB4-205ENST00000579211 ABCC3O15438 1527 aa26.61■■□□□ 1.85
ITGB4-205ENST00000579211 DEPDC5O75140 1603 aa26.61■■□□□ 1.85
ITGB4-205ENST00000579211 PZPP20742 1482 aa26.6■■□□□ 1.85
ITGB4-205ENST00000579211 FBXO31Q5XUX0 539 aaPredicted RBP26.58■■□□□ 1.85
ITGB4-205ENST00000579211 PRDM15P57071 1507 aaPredicted RBP26.58■■□□□ 1.85
ITGB4-205ENST00000579211 ANKRD50Q9ULJ7 1429 aa26.57■■□□□ 1.84
ITGB4-205ENST00000579211 ZNF142P52746 1687 aaPredicted RBP26.57■■□□□ 1.84
ITGB4-205ENST00000579211 RRBP1Q9P2E9 1410 aaKnown RBP26.56■■□□□ 1.84
ITGB4-205ENST00000579211 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
ITGB4-205ENST00000579211 TNRQ92752 1358 aa26.54■■□□□ 1.84
ITGB4-205ENST00000579211 CEP170BQ9Y4F5 1589 aaPredicted RBP26.54■■□□□ 1.84
ITGB4-205ENST00000579211 STRCQ7RTU9 1775 aa26.53■■□□□ 1.84
ITGB4-205ENST00000579211 DMRT2Q9Y5R5 561 aa26.49■■□□□ 1.83
ITGB4-205ENST00000579211 A2ML1A8K2U0 1454 aa26.47■■□□□ 1.83
ITGB4-205ENST00000579211 SPATA31D1Q6ZQQ2 1576 aa26.44■■□□□ 1.82
ITGB4-205ENST00000579211 ERVK-7P63135 1459 aa26.43■■□□□ 1.82
ITGB4-205ENST00000579211 UNC13BO14795 1591 aa26.43■■□□□ 1.82
ITGB4-205ENST00000579211 VWDEQ8N2E2 1590 aa26.43■■□□□ 1.82
ITGB4-205ENST00000579211 NLRP1Q9C000 1473 aa26.42■■□□□ 1.82
ITGB4-205ENST00000579211 ARHGAP31Q2M1Z3 1444 aa26.42■■□□□ 1.82
ITGB4-205ENST00000579211 GCC2Q8IWJ2 1684 aa26.41■■□□□ 1.82
ITGB4-205ENST00000579211 LMTK2Q8IWU2 1503 aa26.41■■□□□ 1.82
ITGB4-205ENST00000579211 TET3O43151 1660 aa26.39■■□□□ 1.82
ITGB4-205ENST00000579211 UGGT1Q9NYU2 1555 aa26.38■■□□□ 1.81
ITGB4-205ENST00000579211 THEMISQ8N1K5 641 aaPredicted RBP26.38■■□□□ 1.81
ITGB4-205ENST00000579211 POLR1AO95602 1720 aaPredicted RBP26.38■■□□□ 1.81
ITGB4-205ENST00000579211 EFCAB6Q5THR3 1501 aa26.38■■□□□ 1.81
ITGB4-205ENST00000579211 NCKAP5LQ9HCH0 1330 aa26.37■■□□□ 1.81
ITGB4-205ENST00000579211 PLA2R1Q13018 1463 aa26.36■■□□□ 1.81
ITGB4-205ENST00000579211 PKD2Q13563 968 aa26.35■■□□□ 1.81
ITGB4-205ENST00000579211 IQGAP3Q86VI3 1631 aa26.34■■□□□ 1.81
ITGB4-205ENST00000579211 NUP155O75694 1391 aa26.33■■□□□ 1.81
ITGB4-205ENST00000579211 STAG3Q9UJ98 1225 aa26.33■■□□□ 1.81
ITGB4-205ENST00000579211 UBR1Q8IWV7 1749 aa26.33■■□□□ 1.81
ITGB4-205ENST00000579211 PTPRTO14522 1441 aa26.32■■□□□ 1.8
ITGB4-205ENST00000579211 E9PCH4 1651 aa26.3■■□□□ 1.8
ITGB4-205ENST00000579211 PIK3C2BO00750 1634 aa26.29■■□□□ 1.8
ITGB4-205ENST00000579211 ANKLE2Q86XL3 938 aa26.29■■□□□ 1.8
ITGB4-205ENST00000579211 RPRD2Q5VT52 1461 aaKnown RBP26.29■■□□□ 1.8
ITGB4-205ENST00000579211 NAIPQ13075 1403 aa26.28■■□□□ 1.8
ITGB4-205ENST00000579211 TRIM52Q96A61 297 aa26.25■■□□□ 1.79
ITGB4-205ENST00000579211 SYNMO15061 1565 aa26.24■■□□□ 1.79
ITGB4-205ENST00000579211 HFM1A2PYH4 1435 aa26.23■■□□□ 1.79
ITGB4-205ENST00000579211 NOS1P29475 1434 aa26.22■■□□□ 1.79
ITGB4-205ENST00000579211 KDM5AP29375 1690 aaKnown RBP26.22■■□□□ 1.79
ITGB4-205ENST00000579211 MYO5BQ9ULV0 1848 aa26.21■■□□□ 1.79
ITGB4-205ENST00000579211 IDI1Q13907 227 aa26.21■■□□□ 1.79
ITGB4-205ENST00000579211 SLC52A1Q9NWF4 448 aa26.21■■□□□ 1.79
ITGB4-205ENST00000579211 EID1Q9Y6B2 187 aa26.18■■□□□ 1.78
ITGB4-205ENST00000579211 SPHKAPQ2M3C7 1700 aa26.17■■□□□ 1.78
ITGB4-205ENST00000579211 NEURL4Q96JN8 1562 aa26.17■■□□□ 1.78
ITGB4-205ENST00000579211 IQGAP1P46940 1657 aa26.17■■□□□ 1.78
ITGB4-205ENST00000579211 CERKQ8TCT0 537 aa26.16■■□□□ 1.78
ITGB4-205ENST00000579211 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
ITGB4-205ENST00000579211 TXNDC2Q86VQ3 553 aa26.14■■□□□ 1.78
ITGB4-205ENST00000579211 ADGRB3O60242 1522 aa26.14■■□□□ 1.77
ITGB4-205ENST00000579211 NPHP4O75161 1426 aaPredicted RBP26.14■■□□□ 1.77
ITGB4-205ENST00000579211 SLIT1O75093 1534 aa26.11■■□□□ 1.77
ITGB4-205ENST00000579211 SCAF11Q99590 1463 aaKnown RBP26.11■■□□□ 1.77
ITGB4-205ENST00000579211 MED14O60244 1454 aa26.1■■□□□ 1.77
ITGB4-205ENST00000579211 ILDR1Q86SU0 546 aaPredicted RBP26.09■■□□□ 1.77
ITGB4-205ENST00000579211 SLC4A1APQ9BWU0 796 aaKnown RBP26.09■■□□□ 1.77
ITGB4-205ENST00000579211 ZNF335Q9H4Z2 1342 aaPredicted RBP26.09■■□□□ 1.77
ITGB4-205ENST00000579211 TMEM2Q9UHN6 1383 aa26.08■■□□□ 1.77
ITGB4-205ENST00000579211 ARHGAP23Q9P227 1491 aa26.08■■□□□ 1.77
ITGB4-205ENST00000579211 TMEM131LA2VDJ0 1609 aa26.07■■□□□ 1.76
ITGB4-205ENST00000579211 LTKP29376 864 aa26.07■■□□□ 1.76
ITGB4-205ENST00000579211 KIF1BO60333 1816 aa26.07■■□□□ 1.76
ITGB4-205ENST00000579211 HDGFP51858 240 aaKnown RBP26.06■■□□□ 1.76
ITGB4-205ENST00000579211 FBXO41Q8TF61 875 aa26.06■■□□□ 1.76
ITGB4-205ENST00000579211 BCANQ96GW7 911 aa26.06■■□□□ 1.76
ITGB4-205ENST00000579211 LTBP4Q8N2S1 1624 aa26.05■■□□□ 1.76
ITGB4-205ENST00000579211 SETD5Q9C0A6 1442 aa26.04■■□□□ 1.76
ITGB4-205ENST00000579211 ACIN1Q9UKV3 1341 aaKnown RBP26.03■■□□□ 1.76
ITGB4-205ENST00000579211 PPP1R15AO75807 674 aaPredicted RBP26.02■■□□□ 1.76
ITGB4-205ENST00000579211 RIMS2Q9UQ26 1411 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms