RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 FAM135AQ9P2D6 1515 aa14.62□□□□□ -0.07
SNX11-205ENST00000578861 MED14O60244 1454 aa14.62□□□□□ -0.07
SNX11-205ENST00000578861 A2MP01023 1474 aa14.62□□□□□ -0.07
SNX11-205ENST00000578861 RBM33Q96EV2 1170 aaKnown RBP14.61□□□□□ -0.07
SNX11-205ENST00000578861 JCADQ9P266 1359 aa14.6□□□□□ -0.07
SNX11-205ENST00000578861 NUTM2BA6NNL0 878 aaPredicted RBP14.59□□□□□ -0.07
SNX11-205ENST00000578861 NUTM2EB1AL46 878 aaPredicted RBP14.59□□□□□ -0.07
SNX11-205ENST00000578861 UBTFP17480 764 aaKnown RBP14.59□□□□□ -0.07
SNX11-205ENST00000578861 NUTM2DQ5VT03 806 aaPredicted RBP14.59□□□□□ -0.07
SNX11-205ENST00000578861 NUTM2AQ8IVF1 878 aaPredicted RBP14.59□□□□□ -0.07
SNX11-205ENST00000578861 SAMD9LQ8IVG5 1584 aa14.59□□□□□ -0.07
SNX11-205ENST00000578861 FOXD1Q16676 465 aa14.58□□□□□ -0.08
SNX11-205ENST00000578861 UGGT1Q9NYU2 1555 aa14.58□□□□□ -0.08
SNX11-205ENST00000578861 WASHC2CQ9Y4E1 1318 aa14.58□□□□□ -0.08
SNX11-205ENST00000578861 MIA2Q96PC5 1412 aa14.58□□□□□ -0.08
SNX11-205ENST00000578861 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
SNX11-205ENST00000578861 SYNMO15061 1565 aa14.56□□□□□ -0.08
SNX11-205ENST00000578861 ITSN2Q9NZM3 1697 aa14.56□□□□□ -0.08
SNX11-205ENST00000578861 KIF3BO15066 747 aa14.56□□□□□ -0.08
SNX11-205ENST00000578861 PROSER2Q86WR7 435 aaPredicted RBP14.55□□□□□ -0.08
SNX11-205ENST00000578861 IQGAP1P46940 1657 aa14.55□□□□□ -0.08
SNX11-205ENST00000578861 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
SNX11-205ENST00000578861 TMEM94Q12767 1356 aa14.54□□□□□ -0.08
SNX11-205ENST00000578861 DEPDC5O75140 1603 aa14.53□□□□□ -0.08
SNX11-205ENST00000578861 TXNDC2Q86VQ3 553 aa14.53□□□□□ -0.08
SNX11-205ENST00000578861 ATP7AQ04656 1500 aa14.52□□□□□ -0.08
SNX11-205ENST00000578861 NLRP1Q9C000 1473 aa14.52□□□□□ -0.08
SNX11-205ENST00000578861 FMN1Q68DA7 1419 aa14.52□□□□□ -0.08
SNX11-205ENST00000578861 SLAIN2Q9P270 581 aa14.52□□□□□ -0.09
SNX11-205ENST00000578861 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
SNX11-205ENST00000578861 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
SNX11-205ENST00000578861 PZPP20742 1482 aa14.5□□□□□ -0.09
SNX11-205ENST00000578861 ROBO1Q9Y6N7 1651 aa14.5□□□□□ -0.09
SNX11-205ENST00000578861 LTKP29376 864 aa14.5□□□□□ -0.09
SNX11-205ENST00000578861 PLXNC1O60486 1568 aa14.5□□□□□ -0.09
SNX11-205ENST00000578861 ARHGAP35Q9NRY4 1499 aa14.5□□□□□ -0.09
SNX11-205ENST00000578861 LRRIQ1Q96JM4 1722 aa14.49□□□□□ -0.09
SNX11-205ENST00000578861 LRP6O75581 1613 aa14.49□□□□□ -0.09
SNX11-205ENST00000578861 PREX2Q70Z35 1606 aa14.49□□□□□ -0.09
SNX11-205ENST00000578861 CFDP1Q9UEE9 299 aaPredicted RBP14.49□□□□□ -0.09
SNX11-205ENST00000578861 AFF2P51816 1311 aa14.47□□□□□ -0.09
SNX11-205ENST00000578861 KDM5DQ9BY66 1539 aa14.47□□□□□ -0.09
SNX11-205ENST00000578861 EID1Q9Y6B2 187 aa14.47□□□□□ -0.09
SNX11-205ENST00000578861 QTRT2Q9H974 415 aaKnown RBP14.46□□□□□ -0.09
SNX11-205ENST00000578861 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
SNX11-205ENST00000578861 DHX29Q7Z478 1369 aaKnown RBP14.45□□□□□ -0.1
SNX11-205ENST00000578861 SCAF11Q99590 1463 aaKnown RBP14.44□□□□□ -0.1
SNX11-205ENST00000578861 CDK12Q9NYV4 1490 aaPredicted RBP14.44□□□□□ -0.1
SNX11-205ENST00000578861 KCNA6P17658 529 aa14.44□□□□□ -0.1
SNX11-205ENST00000578861 RBM6P78332 1123 aaKnown RBP14.43□□□□□ -0.1
SNX11-205ENST00000578861 MSH6P52701 1360 aa14.43□□□□□ -0.1
SNX11-205ENST00000578861 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
SNX11-205ENST00000578861 PHLPP1O60346 1717 aa14.42□□□□□ -0.1
SNX11-205ENST00000578861 SLC26A8Q96RN1 970 aa14.42□□□□□ -0.1
SNX11-205ENST00000578861 RGS12O14924 1447 aa14.41□□□□□ -0.1
SNX11-205ENST00000578861 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
SNX11-205ENST00000578861 ATAD2Q6PL18 1390 aa14.41□□□□□ -0.1
SNX11-205ENST00000578861 INO80Q9ULG1 1556 aaPredicted RBP14.4□□□□□ -0.1
SNX11-205ENST00000578861 BCANQ96GW7 911 aa14.4□□□□□ -0.1
SNX11-205ENST00000578861 C8orf37Q96NL8 207 aa14.4□□□□□ -0.1
SNX11-205ENST00000578861 ZNF644Q9H582 1327 aaPredicted RBP14.4□□□□□ -0.1
SNX11-205ENST00000578861 C14orf37Q86TY3 774 aa14.39□□□□□ -0.11
SNX11-205ENST00000578861 GPATCH8Q9UKJ3 1502 aaKnown RBP14.39□□□□□ -0.11
SNX11-205ENST00000578861 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
SNX11-205ENST00000578861 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
SNX11-205ENST00000578861 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
SNX11-205ENST00000578861 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
SNX11-205ENST00000578861 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
SNX11-205ENST00000578861 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
SNX11-205ENST00000578861 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
SNX11-205ENST00000578861 CDC42BPAQ5VT25 1732 aa14.35□□□□□ -0.11
SNX11-205ENST00000578861 ADGBQ8N7X0 1667 aa14.34□□□□□ -0.11
SNX11-205ENST00000578861 MAP3K1Q13233 1512 aa14.34□□□□□ -0.11
SNX11-205ENST00000578861 CASKIN1Q8WXD9 1431 aa14.33□□□□□ -0.11
SNX11-205ENST00000578861 CCDC18Q5T9S5 1454 aa14.32□□□□□ -0.12
SNX11-205ENST00000578861 COL16A1Q07092 1604 aaPredicted RBP14.32□□□□□ -0.12
SNX11-205ENST00000578861 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
SNX11-205ENST00000578861 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
SNX11-205ENST00000578861 RTEL1-TNFRSF6BF6WH68 1400 aa14.31□□□□□ -0.12
SNX11-205ENST00000578861 ERVK-7P63135 1459 aa14.3□□□□□ -0.12
SNX11-205ENST00000578861 PRDM15P57071 1507 aaPredicted RBP14.3□□□□□ -0.12
SNX11-205ENST00000578861 ADAMTS2O95450 1211 aa14.29□□□□□ -0.12
SNX11-205ENST00000578861 ATF3P18847 181 aa14.29□□□□□ -0.12
SNX11-205ENST00000578861 YY1P25490 414 aa14.29□□□□□ -0.12
SNX11-205ENST00000578861 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
SNX11-205ENST00000578861 FYCO1Q9BQS8 1478 aa14.28□□□□□ -0.12
SNX11-205ENST00000578861 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
SNX11-205ENST00000578861 TMEM2Q9UHN6 1383 aa14.28□□□□□ -0.12
SNX11-205ENST00000578861 SLIT1O75093 1534 aa14.26□□□□□ -0.13
SNX11-205ENST00000578861 CADPS2Q86UW7 1296 aa14.26□□□□□ -0.13
SNX11-205ENST00000578861 MBD5Q9P267 1494 aa14.25□□□□□ -0.13
SNX11-205ENST00000578861 PSDA5PKW4 1024 aaPredicted RBP14.24□□□□□ -0.13
SNX11-205ENST00000578861 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
SNX11-205ENST00000578861 DEFB132Q7Z7B7 95 aa14.24□□□□□ -0.13
SNX11-205ENST00000578861 USP21Q9UK80 565 aa14.24□□□□□ -0.13
SNX11-205ENST00000578861 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
SNX11-205ENST00000578861 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
SNX11-205ENST00000578861 NKTRP30414 1462 aaKnown RBP14.23□□□□□ -0.13
SNX11-205ENST00000578861 TSPY4P0CV99 314 aa14.22□□□□□ -0.13
SNX11-205ENST00000578861 TSPY10P0CW01 314 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms