RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
CDK5RAP3-210ENST00000578733 ACIN1Q9UKV3 1341 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-210ENST00000578733 NAIPQ13075 1403 aa16.87■□□□□ 0.29
CDK5RAP3-210ENST00000578733 RNF17Q9BXT8 1623 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-210ENST00000578733 SIGLEC1Q9BZZ2 1709 aa16.86■□□□□ 0.29
CDK5RAP3-210ENST00000578733 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
CDK5RAP3-210ENST00000578733 SETD5Q9C0A6 1442 aa16.84■□□□□ 0.29
CDK5RAP3-210ENST00000578733 UNC13BO14795 1591 aa16.84■□□□□ 0.29
CDK5RAP3-210ENST00000578733 ZC3H13Q5T200 1668 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-210ENST00000578733 FER1L4A9Z1Z3 1794 aa16.84■□□□□ 0.29
CDK5RAP3-210ENST00000578733 FAM135AQ9P2D6 1515 aa16.82■□□□□ 0.28
CDK5RAP3-210ENST00000578733 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
CDK5RAP3-210ENST00000578733 KIF3BO15066 747 aa16.81■□□□□ 0.28
CDK5RAP3-210ENST00000578733 PRDM15P57071 1507 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-210ENST00000578733 KANK1Q14678 1352 aa16.79■□□□□ 0.28
CDK5RAP3-210ENST00000578733 HSPA2P54652 639 aa16.79■□□□□ 0.28
CDK5RAP3-210ENST00000578733 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
CDK5RAP3-210ENST00000578733 CEP152O94986 1710 aa16.79■□□□□ 0.28
CDK5RAP3-210ENST00000578733 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-210ENST00000578733 GGT6Q6P531 493 aa16.77■□□□□ 0.28
CDK5RAP3-210ENST00000578733 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
CDK5RAP3-210ENST00000578733 MROH2AA6NES4 1674 aa16.77■□□□□ 0.28
CDK5RAP3-210ENST00000578733 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-210ENST00000578733 IQGAP3Q86VI3 1631 aa16.77■□□□□ 0.27
CDK5RAP3-210ENST00000578733 KDM5DQ9BY66 1539 aa16.76■□□□□ 0.27
CDK5RAP3-210ENST00000578733 MROH1Q8NDA8 1641 aa16.76■□□□□ 0.27
CDK5RAP3-210ENST00000578733 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
CDK5RAP3-210ENST00000578733 HRCP23327 699 aa16.75■□□□□ 0.27
CDK5RAP3-210ENST00000578733 MLECQ14165 292 aa16.75■□□□□ 0.27
CDK5RAP3-210ENST00000578733 TET3O43151 1660 aa16.74■□□□□ 0.27
CDK5RAP3-210ENST00000578733 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
CDK5RAP3-210ENST00000578733 CNTLNQ9NXG0 1405 aa16.73■□□□□ 0.27
CDK5RAP3-210ENST00000578733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.271e-8■□□□□ 11.1
CDK5RAP3-210ENST00000578733 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
CDK5RAP3-210ENST00000578733 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
CDK5RAP3-210ENST00000578733 WASHC2CQ9Y4E1 1318 aa16.71■□□□□ 0.27
CDK5RAP3-210ENST00000578733 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
CDK5RAP3-210ENST00000578733 NUP155O75694 1391 aa16.71■□□□□ 0.27
CDK5RAP3-210ENST00000578733 PREX1Q8TCU6 1659 aa16.71■□□□□ 0.27
CDK5RAP3-210ENST00000578733 ABCC3O15438 1527 aa16.7■□□□□ 0.26
CDK5RAP3-210ENST00000578733 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-210ENST00000578733 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
CDK5RAP3-210ENST00000578733 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
CDK5RAP3-210ENST00000578733 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
CDK5RAP3-210ENST00000578733 SOCS7O14512 581 aa16.69■□□□□ 0.26
CDK5RAP3-210ENST00000578733 C3P01024 1663 aa16.67■□□□□ 0.26
CDK5RAP3-210ENST00000578733 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
CDK5RAP3-210ENST00000578733 E9PCH4 1651 aa16.65■□□□□ 0.26
CDK5RAP3-210ENST00000578733 RPRD2Q5VT52 1461 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-210ENST00000578733 SPHKAPQ2M3C7 1700 aa16.63■□□□□ 0.25
CDK5RAP3-210ENST00000578733 ILDR2Q71H61 639 aa16.63■□□□□ 0.25
CDK5RAP3-210ENST00000578733 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-210ENST00000578733 PZPP20742 1482 aa16.62■□□□□ 0.25
CDK5RAP3-210ENST00000578733 SETD1BQ9UPS6 1966 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-210ENST00000578733 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
CDK5RAP3-210ENST00000578733 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
CDK5RAP3-210ENST00000578733 STRCQ7RTU9 1775 aa16.61■□□□□ 0.25
CDK5RAP3-210ENST00000578733 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
CDK5RAP3-210ENST00000578733 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
CDK5RAP3-210ENST00000578733 MPHOSPH9Q99550 1183 aa16.59■□□□□ 0.25
CDK5RAP3-210ENST00000578733 PTPRTO14522 1441 aa16.58■□□□□ 0.24
CDK5RAP3-210ENST00000578733 NPATQ14207 1427 aa16.56■□□□□ 0.24
CDK5RAP3-210ENST00000578733 PKD2Q13563 968 aa16.56■□□□□ 0.24
CDK5RAP3-210ENST00000578733 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
CDK5RAP3-210ENST00000578733 KIF1BO60333 1816 aa16.55■□□□□ 0.24
CDK5RAP3-210ENST00000578733 CEBPAP49715 358 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-210ENST00000578733 ERVK-7P63135 1459 aa16.54■□□□□ 0.24
CDK5RAP3-210ENST00000578733 TRPM2O94759 1503 aa16.52■□□□□ 0.24
CDK5RAP3-210ENST00000578733 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
CDK5RAP3-210ENST00000578733 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-210ENST00000578733 SYNMO15061 1565 aa16.49■□□□□ 0.23
CDK5RAP3-210ENST00000578733 NOS1P29475 1434 aa16.49■□□□□ 0.23
CDK5RAP3-210ENST00000578733 TNRQ92752 1358 aa16.49■□□□□ 0.23
CDK5RAP3-210ENST00000578733 PIK3C2BO00750 1634 aa16.48■□□□□ 0.23
CDK5RAP3-210ENST00000578733 KDM5AP29375 1690 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-210ENST00000578733 ZNF142P52746 1687 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-210ENST00000578733 LTBP4Q8N2S1 1624 aa16.48■□□□□ 0.23
CDK5RAP3-210ENST00000578733 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
CDK5RAP3-210ENST00000578733 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.23
CDK5RAP3-210ENST00000578733 CLTCL1P53675 1640 aa16.46■□□□□ 0.23
CDK5RAP3-210ENST00000578733 SLC52A1Q9NWF4 448 aa16.46■□□□□ 0.23
CDK5RAP3-210ENST00000578733 MYO5BQ9ULV0 1848 aa16.46■□□□□ 0.23
CDK5RAP3-210ENST00000578733 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-210ENST00000578733 FOXD1Q16676 465 aa16.44■□□□□ 0.22
CDK5RAP3-210ENST00000578733 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-210ENST00000578733 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-210ENST00000578733 UBR1Q8IWV7 1749 aa16.43■□□□□ 0.22
CDK5RAP3-210ENST00000578733 CLSPNQ9HAW4 1339 aa16.43■□□□□ 0.22
CDK5RAP3-210ENST00000578733 ANKRD30BQ9BXX2 1392 aa16.42■□□□□ 0.22
CDK5RAP3-210ENST00000578733 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
CDK5RAP3-210ENST00000578733 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
CDK5RAP3-210ENST00000578733 A2ML1A8K2U0 1454 aa16.41■□□□□ 0.22
CDK5RAP3-210ENST00000578733 UGGT1Q9NYU2 1555 aa16.4■□□□□ 0.22
CDK5RAP3-210ENST00000578733 PLA2R1Q13018 1463 aa16.4■□□□□ 0.22
CDK5RAP3-210ENST00000578733 NEURL4Q96JN8 1562 aa16.39■□□□□ 0.21
CDK5RAP3-210ENST00000578733 TMEM131LA2VDJ0 1609 aa16.39■□□□□ 0.21
CDK5RAP3-210ENST00000578733 CHGAP10645 457 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-210ENST00000578733 IDI1Q13907 227 aa16.36■□□□□ 0.21
CDK5RAP3-210ENST00000578733 POLR1AO95602 1720 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-210ENST00000578733 IFT172Q9UG01 1749 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms