RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 CSRNP3Q8WYN3 585 aa10.53□□□□□ -0.72
UBB-208ENST00000578706 CLIP1P30622 1438 aa10.52□□□□□ -0.73
UBB-208ENST00000578706 GGT6Q6P531 493 aa10.52□□□□□ -0.73
UBB-208ENST00000578706 ANKLE2Q86XL3 938 aa10.52□□□□□ -0.73
UBB-208ENST00000578706 ROBO1Q9Y6N7 1651 aa10.52□□□□□ -0.73
UBB-208ENST00000578706 UGGT1Q9NYU2 1555 aa10.52□□□□□ -0.73
UBB-208ENST00000578706 FAM135BQ49AJ0 1406 aa10.51□□□□□ -0.73
UBB-208ENST00000578706 PZPP20742 1482 aa10.51□□□□□ -0.73
UBB-208ENST00000578706 ADGBQ8N7X0 1667 aa10.5□□□□□ -0.73
UBB-208ENST00000578706 CDK11AQ9UQ88 783 aaPredicted RBP10.5□□□□□ -0.73
UBB-208ENST00000578706 SPAG9O60271 1321 aaKnown RBP10.5□□□□□ -0.73
UBB-208ENST00000578706 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
UBB-208ENST00000578706 ARHGAP35Q9NRY4 1499 aa10.49□□□□□ -0.73
UBB-208ENST00000578706 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
UBB-208ENST00000578706 NLRP1Q9C000 1473 aa10.48□□□□□ -0.73
UBB-208ENST00000578706 LRP6O75581 1613 aa10.47□□□□□ -0.73
UBB-208ENST00000578706 FAM135AQ9P2D6 1515 aa10.47□□□□□ -0.73
UBB-208ENST00000578706 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.734e-6■■■□□ 14.7
UBB-208ENST00000578706 THEMISQ8N1K5 641 aaPredicted RBP10.46□□□□□ -0.73
UBB-208ENST00000578706 MIA2Q96PC5 1412 aa10.46□□□□□ -0.74
UBB-208ENST00000578706 KDM5DQ9BY66 1539 aa10.46□□□□□ -0.74
UBB-208ENST00000578706 MAP3K1Q13233 1512 aa10.45□□□□□ -0.74
UBB-208ENST00000578706 GPATCH8Q9UKJ3 1502 aaKnown RBP10.45□□□□□ -0.74
UBB-208ENST00000578706 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
UBB-208ENST00000578706 TRIM52Q96A61 297 aa10.44□□□□□ -0.74
UBB-208ENST00000578706 PHLPP1O60346 1717 aa10.44□□□□□ -0.74
UBB-208ENST00000578706 COL16A1Q07092 1604 aaPredicted RBP10.44□□□□□ -0.74
UBB-208ENST00000578706 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
UBB-208ENST00000578706 UBR1Q8IWV7 1749 aa10.43□□□□□ -0.74
UBB-208ENST00000578706 SCAF11Q99590 1463 aaKnown RBP10.41□□□□□ -0.74
UBB-208ENST00000578706 JCADQ9P266 1359 aa10.4□□□□□ -0.74
UBB-208ENST00000578706 NCOA2Q15596 1464 aa10.4□□□□□ -0.74
UBB-208ENST00000578706 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.74
UBB-208ENST00000578706 TMEM94Q12767 1356 aa10.39□□□□□ -0.75
UBB-208ENST00000578706 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
UBB-208ENST00000578706 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
UBB-208ENST00000578706 ARHGAP23Q9P227 1491 aa10.39□□□□□ -0.75
UBB-208ENST00000578706 DHX29Q7Z478 1369 aaKnown RBP10.39□□□□□ -0.75
UBB-208ENST00000578706 CCDC18Q5T9S5 1454 aa10.38□□□□□ -0.75
UBB-208ENST00000578706 LRRC9Q6ZRR7 1453 aa10.38□□□□□ -0.75
UBB-208ENST00000578706 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
UBB-208ENST00000578706 LTKP29376 864 aa10.38□□□□□ -0.75
UBB-208ENST00000578706 SLIT1O75093 1534 aa10.38□□□□□ -0.75
UBB-208ENST00000578706 EEA1Q15075 1411 aa10.37□□□□□ -0.75
UBB-208ENST00000578706 ERVK-7P63135 1459 aa10.36□□□□□ -0.75
UBB-208ENST00000578706 TIAM1Q13009 1591 aa10.36□□□□□ -0.75
UBB-208ENST00000578706 RGS12O14924 1447 aa10.36□□□□□ -0.75
UBB-208ENST00000578706 KIF3BO15066 747 aa10.36□□□□□ -0.75
UBB-208ENST00000578706 RBM33Q96EV2 1170 aaKnown RBP10.36□□□□□ -0.75
UBB-208ENST00000578706 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
UBB-208ENST00000578706 RTEL1-TNFRSF6BF6WH68 1400 aa10.35□□□□□ -0.75
UBB-208ENST00000578706 CASKIN1Q8WXD9 1431 aa10.35□□□□□ -0.75
UBB-208ENST00000578706 ABCC3O15438 1527 aa10.35□□□□□ -0.75
UBB-208ENST00000578706 ZNF772Q68DY9 489 aaPredicted RBP10.35□□□□□ -0.75
UBB-208ENST00000578706 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
UBB-208ENST00000578706 WASHC2CQ9Y4E1 1318 aa10.34□□□□□ -0.75
UBB-208ENST00000578706 PRDM15P57071 1507 aaPredicted RBP10.34□□□□□ -0.75
UBB-208ENST00000578706 NWD1Q149M9 1564 aa10.34□□□□□ -0.75
UBB-208ENST00000578706 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
UBB-208ENST00000578706 CFAP65Q6ZU64 1925 aaKnown RBP10.33□□□□□ -0.76
UBB-208ENST00000578706 RXRBP28702 533 aa10.33□□□□□ -0.76
UBB-208ENST00000578706 SPATA31A6Q5VVP1 1343 aa10.33□□□□□ -0.76
UBB-208ENST00000578706 DIP2AQ14689 1571 aa10.32□□□□□ -0.76
UBB-208ENST00000578706 EP400Q96L91 3159 aa10.32□□□□□ -0.76
UBB-208ENST00000578706 CFDP1Q9UEE9 299 aaPredicted RBP10.32□□□□□ -0.76
UBB-208ENST00000578706 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
UBB-208ENST00000578706 TET3O43151 1660 aa10.31□□□□□ -0.76
UBB-208ENST00000578706 CAMSAP2Q08AD1 1489 aa10.31□□□□□ -0.76
UBB-208ENST00000578706 AHDC1Q5TGY3 1603 aaPredicted RBP10.31□□□□□ -0.76
UBB-208ENST00000578706 KDM5AP29375 1690 aaKnown RBP10.31□□□□□ -0.76
UBB-208ENST00000578706 NKTRP30414 1462 aaKnown RBP10.3□□□□□ -0.76
UBB-208ENST00000578706 CEP152O94986 1710 aa10.3□□□□□ -0.76
UBB-208ENST00000578706 TXNDC2Q86VQ3 553 aa10.3□□□□□ -0.76
UBB-208ENST00000578706 PIK3C2BO00750 1634 aa10.29□□□□□ -0.76
UBB-208ENST00000578706 MEX3CQ5U5Q3 659 aaKnown RBP10.29□□□□□ -0.76
UBB-208ENST00000578706 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
UBB-208ENST00000578706 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
UBB-208ENST00000578706 KCNA6P17658 529 aa10.28□□□□□ -0.76
UBB-208ENST00000578706 FYCO1Q9BQS8 1478 aa10.28□□□□□ -0.76
UBB-208ENST00000578706 MAST1Q9Y2H9 1570 aa10.27□□□□□ -0.76
UBB-208ENST00000578706 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
UBB-208ENST00000578706 EHMT2Q96KQ7 1210 aa10.27□□□□□ -0.77
UBB-208ENST00000578706 AFF2P51816 1311 aa10.27□□□□□ -0.77
UBB-208ENST00000578706 MSH6P52701 1360 aa10.26□□□□□ -0.77
UBB-208ENST00000578706 TMEM2Q9UHN6 1383 aa10.26□□□□□ -0.77
UBB-208ENST00000578706 CCDC141Q6ZP82 1450 aa10.26□□□□□ -0.77
UBB-208ENST00000578706 LRP5O75197 1615 aa10.25□□□□□ -0.77
UBB-208ENST00000578706 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
UBB-208ENST00000578706 CHD2O14647 1828 aaKnown RBP10.24□□□□□ -0.77
UBB-208ENST00000578706 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
UBB-208ENST00000578706 SLC26A8Q96RN1 970 aa10.24□□□□□ -0.77
UBB-208ENST00000578706 EIF2AK4Q9P2K8 1649 aaKnown RBP10.23□□□□□ -0.77
UBB-208ENST00000578706 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.23□□□□□ -0.77
UBB-208ENST00000578706 NUTM2BA6NNL0 878 aaPredicted RBP10.22□□□□□ -0.77
UBB-208ENST00000578706 NUTM2EB1AL46 878 aaPredicted RBP10.22□□□□□ -0.77
UBB-208ENST00000578706 RBM6P78332 1123 aaKnown RBP10.22□□□□□ -0.77
UBB-208ENST00000578706 NUTM2DQ5VT03 806 aaPredicted RBP10.22□□□□□ -0.77
UBB-208ENST00000578706 NUTM2AQ8IVF1 878 aaPredicted RBP10.22□□□□□ -0.77
UBB-208ENST00000578706 EID1Q9Y6B2 187 aa10.22□□□□□ -0.77
UBB-208ENST00000578706 ATAD2Q6PL18 1390 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms