RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.2
ERBB2-207ENST00000578502 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
ERBB2-207ENST00000578502 MROH1Q8NDA8 1641 aa16.26■□□□□ 0.19
ERBB2-207ENST00000578502 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
ERBB2-207ENST00000578502 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
ERBB2-207ENST00000578502 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
ERBB2-207ENST00000578502 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
ERBB2-207ENST00000578502 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
ERBB2-207ENST00000578502 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
ERBB2-207ENST00000578502 EIF2AK4Q9P2K8 1649 aaKnown RBP16.24■□□□□ 0.19
ERBB2-207ENST00000578502 NCOA1Q15788 1441 aa16.24■□□□□ 0.19
ERBB2-207ENST00000578502 ITGAEP38570 1179 aa16.23■□□□□ 0.19
ERBB2-207ENST00000578502 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
ERBB2-207ENST00000578502 ABCC3O15438 1527 aa16.22■□□□□ 0.19
ERBB2-207ENST00000578502 CEP152O94986 1710 aa16.22■□□□□ 0.19
ERBB2-207ENST00000578502 NPATQ14207 1427 aa16.21■□□□□ 0.19
ERBB2-207ENST00000578502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
ERBB2-207ENST00000578502 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
ERBB2-207ENST00000578502 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
ERBB2-207ENST00000578502 MYO3AQ8NEV4 1616 aa16.19■□□□□ 0.18
ERBB2-207ENST00000578502 STRCQ7RTU9 1775 aa16.19■□□□□ 0.18
ERBB2-207ENST00000578502 PZPP20742 1482 aa16.18■□□□□ 0.18
ERBB2-207ENST00000578502 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
ERBB2-207ENST00000578502 CFAP65Q6ZU64 1925 aaKnown RBP16.17■□□□□ 0.18
ERBB2-207ENST00000578502 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
ERBB2-207ENST00000578502 PRDM15P57071 1507 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-207ENST00000578502 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
ERBB2-207ENST00000578502 TNRQ92752 1358 aa16.15■□□□□ 0.18
ERBB2-207ENST00000578502 ZC3H13Q5T200 1668 aaKnown RBP16.15■□□□□ 0.18
ERBB2-207ENST00000578502 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-207ENST00000578502 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-207ENST00000578502 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
ERBB2-207ENST00000578502 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
ERBB2-207ENST00000578502 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
ERBB2-207ENST00000578502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
ERBB2-207ENST00000578502 VWDEQ8N2E2 1590 aa16.11■□□□□ 0.17
ERBB2-207ENST00000578502 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
ERBB2-207ENST00000578502 ERVK-7P63135 1459 aa16.1■□□□□ 0.17
ERBB2-207ENST00000578502 ROCK1Q13464 1354 aa16.1■□□□□ 0.17
ERBB2-207ENST00000578502 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
ERBB2-207ENST00000578502 KANK1Q14678 1352 aa16.08■□□□□ 0.16
ERBB2-207ENST00000578502 LMTK2Q8IWU2 1503 aa16.06■□□□□ 0.16
ERBB2-207ENST00000578502 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
ERBB2-207ENST00000578502 UNC13BO14795 1591 aa16.04■□□□□ 0.16
ERBB2-207ENST00000578502 EFCAB6Q5THR3 1501 aa16.04■□□□□ 0.16
ERBB2-207ENST00000578502 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
ERBB2-207ENST00000578502 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
ERBB2-207ENST00000578502 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
ERBB2-207ENST00000578502 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
ERBB2-207ENST00000578502 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
ERBB2-207ENST00000578502 PTPRTO14522 1441 aa16.02■□□□□ 0.16
ERBB2-207ENST00000578502 SYNMO15061 1565 aa16.01■□□□□ 0.15
ERBB2-207ENST00000578502 UBR1Q8IWV7 1749 aa16■□□□□ 0.15
ERBB2-207ENST00000578502 NAIPQ13075 1403 aa16■□□□□ 0.15
ERBB2-207ENST00000578502 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
ERBB2-207ENST00000578502 TET3O43151 1660 aa15.99■□□□□ 0.15
ERBB2-207ENST00000578502 PIK3C2BO00750 1634 aa15.99■□□□□ 0.15
ERBB2-207ENST00000578502 PKD2Q13563 968 aa15.99■□□□□ 0.15
ERBB2-207ENST00000578502 THEMISQ8N1K5 641 aaPredicted RBP15.99■□□□□ 0.15
ERBB2-207ENST00000578502 NUP155O75694 1391 aa15.99■□□□□ 0.15
ERBB2-207ENST00000578502 IQGAP3Q86VI3 1631 aa15.98■□□□□ 0.15
ERBB2-207ENST00000578502 POLR1AO95602 1720 aaPredicted RBP15.98■□□□□ 0.15
ERBB2-207ENST00000578502 NOS1P29475 1434 aa15.98■□□□□ 0.15
ERBB2-207ENST00000578502 IDI1Q13907 227 aa15.98■□□□□ 0.15
ERBB2-207ENST00000578502 E9PCH4 1651 aa15.97■□□□□ 0.15
ERBB2-207ENST00000578502 GCC2Q8IWJ2 1684 aa15.97■□□□□ 0.15
ERBB2-207ENST00000578502 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
ERBB2-207ENST00000578502 ZNF335Q9H4Z2 1342 aaPredicted RBP15.95■□□□□ 0.14
ERBB2-207ENST00000578502 ANKLE2Q86XL3 938 aa15.95■□□□□ 0.14
ERBB2-207ENST00000578502 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
ERBB2-207ENST00000578502 LTKP29376 864 aa15.93■□□□□ 0.14
ERBB2-207ENST00000578502 HFM1A2PYH4 1435 aa15.93■□□□□ 0.14
ERBB2-207ENST00000578502 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
ERBB2-207ENST00000578502 NPHP4O75161 1426 aaPredicted RBP15.92■□□□□ 0.14
ERBB2-207ENST00000578502 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
ERBB2-207ENST00000578502 MYO5BQ9ULV0 1848 aa15.91■□□□□ 0.14
ERBB2-207ENST00000578502 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
ERBB2-207ENST00000578502 FBXO41Q8TF61 875 aa15.9■□□□□ 0.14
ERBB2-207ENST00000578502 MED14O60244 1454 aa15.9■□□□□ 0.14
ERBB2-207ENST00000578502 SLIT1O75093 1534 aa15.89■□□□□ 0.13
ERBB2-207ENST00000578502 TXNDC2Q86VQ3 553 aa15.89■□□□□ 0.13
ERBB2-207ENST00000578502 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
ERBB2-207ENST00000578502 IQGAP1P46940 1657 aa15.89■□□□□ 0.13
ERBB2-207ENST00000578502 ADGRB3O60242 1522 aa15.89■□□□□ 0.13
ERBB2-207ENST00000578502 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
ERBB2-207ENST00000578502 TRIM52Q96A61 297 aa15.88■□□□□ 0.13
ERBB2-207ENST00000578502 SLC52A1Q9NWF4 448 aa15.88■□□□□ 0.13
ERBB2-207ENST00000578502 SCAF11Q99590 1463 aaKnown RBP15.87■□□□□ 0.13
ERBB2-207ENST00000578502 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
ERBB2-207ENST00000578502 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
ERBB2-207ENST00000578502 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
ERBB2-207ENST00000578502 SPHKAPQ2M3C7 1700 aa15.84■□□□□ 0.13
ERBB2-207ENST00000578502 STRCP1A6NGW2 1772 aa15.84■□□□□ 0.13
ERBB2-207ENST00000578502 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
ERBB2-207ENST00000578502 EID1Q9Y6B2 187 aa15.83■□□□□ 0.12
ERBB2-207ENST00000578502 FOXD1Q16676 465 aa15.82■□□□□ 0.12
ERBB2-207ENST00000578502 ZFYVE9O95405 1425 aa15.81■□□□□ 0.12
ERBB2-207ENST00000578502 RIMS2Q9UQ26 1411 aa15.8■□□□□ 0.12
ERBB2-207ENST00000578502 SLC26A8Q96RN1 970 aa15.8■□□□□ 0.12
ERBB2-207ENST00000578502 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms