RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CLSPNQ9HAW4 1339 aa19.81■□□□□ 0.76
SRSF1-202ENST00000578430 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
SRSF1-202ENST00000578430 EIF2AK4Q9P2K8 1649 aaKnown RBP19.77■□□□□ 0.76
SRSF1-202ENST00000578430 TRIM52Q96A61 297 aa19.77■□□□□ 0.76
SRSF1-202ENST00000578430 A2MP01023 1474 aa19.77■□□□□ 0.76
SRSF1-202ENST00000578430 ABCA6Q8N139 1617 aa19.76■□□□□ 0.75
SRSF1-202ENST00000578430 KDM5DQ9BY66 1539 aa19.75■□□□□ 0.75
SRSF1-202ENST00000578430 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
SRSF1-202ENST00000578430 UNC13BO14795 1591 aa19.74■□□□□ 0.75
SRSF1-202ENST00000578430 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
SRSF1-202ENST00000578430 REREQ9P2R6 1566 aa19.71■□□□□ 0.75
SRSF1-202ENST00000578430 ATP10AO60312 1499 aa19.71■□□□□ 0.75
SRSF1-202ENST00000578430 BCORL1Q5H9F3 1711 aa19.71■□□□□ 0.75
SRSF1-202ENST00000578430 NUP155O75694 1391 aa19.7■□□□□ 0.74
SRSF1-202ENST00000578430 YEATS2Q9ULM3 1422 aa19.7■□□□□ 0.74
SRSF1-202ENST00000578430 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
SRSF1-202ENST00000578430 DEPDC5O75140 1603 aa19.69■□□□□ 0.74
SRSF1-202ENST00000578430 PZPP20742 1482 aa19.68■□□□□ 0.74
SRSF1-202ENST00000578430 ARHGEF40Q8TER5 1519 aa19.67■□□□□ 0.74
SRSF1-202ENST00000578430 KIF3BO15066 747 aa19.67■□□□□ 0.74
SRSF1-202ENST00000578430 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
SRSF1-202ENST00000578430 RNF17Q9BXT8 1623 aaKnown RBP19.66■□□□□ 0.74
SRSF1-202ENST00000578430 KANK1Q14678 1352 aa19.66■□□□□ 0.74
SRSF1-202ENST00000578430 IQGAP3Q86VI3 1631 aa19.65■□□□□ 0.74
SRSF1-202ENST00000578430 AGLP35573 1532 aa19.65■□□□□ 0.74
SRSF1-202ENST00000578430 PRDM15P57071 1507 aaPredicted RBP19.64■□□□□ 0.73
SRSF1-202ENST00000578430 FAM135AQ9P2D6 1515 aa19.64■□□□□ 0.73
SRSF1-202ENST00000578430 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
SRSF1-202ENST00000578430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.733e-11■■■□□ 14.7
SRSF1-202ENST00000578430 MROH1Q8NDA8 1641 aa19.6■□□□□ 0.73
SRSF1-202ENST00000578430 PKD2Q13563 968 aa19.58■□□□□ 0.72
SRSF1-202ENST00000578430 LMTK2Q8IWU2 1503 aa19.57■□□□□ 0.72
SRSF1-202ENST00000578430 TET3O43151 1660 aa19.55■□□□□ 0.72
SRSF1-202ENST00000578430 ANKRD30BQ9BXX2 1392 aa19.55■□□□□ 0.72
SRSF1-202ENST00000578430 GGT6Q6P531 493 aa19.54■□□□□ 0.72
SRSF1-202ENST00000578430 ADAMTSL3P82987 1691 aa19.54■□□□□ 0.72
SRSF1-202ENST00000578430 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
SRSF1-202ENST00000578430 ZC3H13Q5T200 1668 aaKnown RBP19.52■□□□□ 0.72
SRSF1-202ENST00000578430 PTPRMP28827 1452 aa19.5■□□□□ 0.71
SRSF1-202ENST00000578430 ABCC3O15438 1527 aa19.5■□□□□ 0.71
SRSF1-202ENST00000578430 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
SRSF1-202ENST00000578430 EFCAB6Q5THR3 1501 aa19.49■□□□□ 0.71
SRSF1-202ENST00000578430 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
SRSF1-202ENST00000578430 SIN3AQ96ST3 1273 aa19.47■□□□□ 0.71
SRSF1-202ENST00000578430 CEP152O94986 1710 aa19.47■□□□□ 0.71
SRSF1-202ENST00000578430 E9PCH4 1651 aa19.46■□□□□ 0.71
SRSF1-202ENST00000578430 SIGLEC1Q9BZZ2 1709 aa19.46■□□□□ 0.71
SRSF1-202ENST00000578430 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
SRSF1-202ENST00000578430 MADDQ8WXG6 1647 aa19.46■□□□□ 0.71
SRSF1-202ENST00000578430 PTPRTO14522 1441 aa19.44■□□□□ 0.7
SRSF1-202ENST00000578430 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
SRSF1-202ENST00000578430 ARID4BQ4LE39 1312 aaPredicted RBP19.44■□□□□ 0.7
SRSF1-202ENST00000578430 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
SRSF1-202ENST00000578430 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
SRSF1-202ENST00000578430 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
SRSF1-202ENST00000578430 CCDC144AA2RUR9 1427 aa19.41■□□□□ 0.7
SRSF1-202ENST00000578430 TRPM2O94759 1503 aa19.41■□□□□ 0.7
SRSF1-202ENST00000578430 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
SRSF1-202ENST00000578430 NPATQ14207 1427 aa19.4■□□□□ 0.7
SRSF1-202ENST00000578430 CNTLNQ9NXG0 1405 aa19.4■□□□□ 0.7
SRSF1-202ENST00000578430 ESF1Q9H501 851 aaKnown RBP19.39■□□□□ 0.69
SRSF1-202ENST00000578430 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.69
SRSF1-202ENST00000578430 MLECQ14165 292 aa19.37■□□□□ 0.69
SRSF1-202ENST00000578430 FBXO41Q8TF61 875 aa19.36■□□□□ 0.69
SRSF1-202ENST00000578430 CLTCQ00610 1675 aaKnown RBP19.35■□□□□ 0.69
SRSF1-202ENST00000578430 LMTK3Q96Q04 1460 aa19.35■□□□□ 0.69
SRSF1-202ENST00000578430 NOS1P29475 1434 aa19.34■□□□□ 0.69
SRSF1-202ENST00000578430 MROH2AA6NES4 1674 aa19.33■□□□□ 0.69
SRSF1-202ENST00000578430 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
SRSF1-202ENST00000578430 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
SRSF1-202ENST00000578430 ZMYM3Q14202 1370 aa19.3■□□□□ 0.68
SRSF1-202ENST00000578430 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
SRSF1-202ENST00000578430 PREX1Q8TCU6 1659 aa19.29■□□□□ 0.68
SRSF1-202ENST00000578430 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
SRSF1-202ENST00000578430 L3MBTL2Q969R5 705 aa19.28■□□□□ 0.68
SRSF1-202ENST00000578430 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
SRSF1-202ENST00000578430 SPATA31D1Q6ZQQ2 1576 aa19.27■□□□□ 0.67
SRSF1-202ENST00000578430 FER1L4A9Z1Z3 1794 aa19.27■□□□□ 0.67
SRSF1-202ENST00000578430 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
SRSF1-202ENST00000578430 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
SRSF1-202ENST00000578430 SYNMO15061 1565 aa19.25■□□□□ 0.67
SRSF1-202ENST00000578430 HSPA2P54652 639 aa19.25■□□□□ 0.67
SRSF1-202ENST00000578430 STAC3Q96MF2 364 aa19.25■□□□□ 0.67
SRSF1-202ENST00000578430 CFAP65Q6ZU64 1925 aaKnown RBP19.24■□□□□ 0.67
SRSF1-202ENST00000578430 KIF1BO60333 1816 aa19.23■□□□□ 0.67
SRSF1-202ENST00000578430 FBXO31Q5XUX0 539 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-202ENST00000578430 UGGT1Q9NYU2 1555 aa19.21■□□□□ 0.67
SRSF1-202ENST00000578430 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
SRSF1-202ENST00000578430 UHRF1BP1Q6BDS2 1440 aa19.18■□□□□ 0.66
SRSF1-202ENST00000578430 IDI1Q13907 227 aa19.18■□□□□ 0.66
SRSF1-202ENST00000578430 RGL3Q3MIN7 710 aa19.18■□□□□ 0.66
SRSF1-202ENST00000578430 TNRQ92752 1358 aa19.18■□□□□ 0.66
SRSF1-202ENST00000578430 C3P01024 1663 aa19.17■□□□□ 0.66
SRSF1-202ENST00000578430 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
SRSF1-202ENST00000578430 RPGRIP1LQ68CZ1 1315 aa19.17■□□□□ 0.66
SRSF1-202ENST00000578430 NLRP1Q9C000 1473 aa19.14■□□□□ 0.65
SRSF1-202ENST00000578430 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
SRSF1-202ENST00000578430 KDM5AP29375 1690 aaKnown RBP19.12■□□□□ 0.65
SRSF1-202ENST00000578430 TMEM131LA2VDJ0 1609 aa19.12■□□□□ 0.65
SRSF1-202ENST00000578430 MYOM2P54296 1465 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms