RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
GGA3-204ENST00000578208 ANKRD30AQ9BXX3 1397 aa17.86■□□□□ 0.45
GGA3-204ENST00000578208 KDM5DQ9BY66 1539 aa17.86■□□□□ 0.45
GGA3-204ENST00000578208 NPATQ14207 1427 aa17.85■□□□□ 0.45
GGA3-204ENST00000578208 RNF17Q9BXT8 1623 aaKnown RBP17.84■□□□□ 0.45
GGA3-204ENST00000578208 ERBINQ96RT1 1412 aa17.84■□□□□ 0.45
GGA3-204ENST00000578208 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
GGA3-204ENST00000578208 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
GGA3-204ENST00000578208 WASHC2CQ9Y4E1 1318 aa17.83■□□□□ 0.44
GGA3-204ENST00000578208 HSPA2P54652 639 aa17.81■□□□□ 0.44
GGA3-204ENST00000578208 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
GGA3-204ENST00000578208 ZC3H13Q5T200 1668 aaKnown RBP17.8■□□□□ 0.44
GGA3-204ENST00000578208 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
GGA3-204ENST00000578208 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
GGA3-204ENST00000578208 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
GGA3-204ENST00000578208 PZPP20742 1482 aa17.76■□□□□ 0.43
GGA3-204ENST00000578208 ABCC3O15438 1527 aa17.76■□□□□ 0.43
GGA3-204ENST00000578208 KANK1Q14678 1352 aa17.76■□□□□ 0.43
GGA3-204ENST00000578208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.76■□□□□ 0.43
GGA3-204ENST00000578208 MYO3AQ8NEV4 1616 aa17.76■□□□□ 0.43
GGA3-204ENST00000578208 PRDM15P57071 1507 aaPredicted RBP17.75■□□□□ 0.43
GGA3-204ENST00000578208 MROH1Q8NDA8 1641 aa17.75■□□□□ 0.43
GGA3-204ENST00000578208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
GGA3-204ENST00000578208 TNRQ92752 1358 aa17.73■□□□□ 0.43
GGA3-204ENST00000578208 DEPDC5O75140 1603 aa17.72■□□□□ 0.43
GGA3-204ENST00000578208 CEP152O94986 1710 aa17.72■□□□□ 0.43
GGA3-204ENST00000578208 ZNF142P52746 1687 aaPredicted RBP17.72■□□□□ 0.43
GGA3-204ENST00000578208 ITGAEP38570 1179 aa17.72■□□□□ 0.43
GGA3-204ENST00000578208 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
GGA3-204ENST00000578208 CEP170BQ9Y4F5 1589 aaPredicted RBP17.71■□□□□ 0.43
GGA3-204ENST00000578208 ROCK1Q13464 1354 aa17.71■□□□□ 0.43
GGA3-204ENST00000578208 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
GGA3-204ENST00000578208 ANKRD50Q9ULJ7 1429 aa17.71■□□□□ 0.43
GGA3-204ENST00000578208 FBXO31Q5XUX0 539 aaPredicted RBP17.69■□□□□ 0.42
GGA3-204ENST00000578208 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
GGA3-204ENST00000578208 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
GGA3-204ENST00000578208 NLRP1Q9C000 1473 aa17.66■□□□□ 0.42
GGA3-204ENST00000578208 SPATA31D1Q6ZQQ2 1576 aa17.66■□□□□ 0.42
GGA3-204ENST00000578208 ERVK-7P63135 1459 aa17.65■□□□□ 0.42
GGA3-204ENST00000578208 ARHGAP31Q2M1Z3 1444 aa17.64■□□□□ 0.42
GGA3-204ENST00000578208 LMTK2Q8IWU2 1503 aa17.64■□□□□ 0.41
GGA3-204ENST00000578208 STRCQ7RTU9 1775 aa17.63■□□□□ 0.41
GGA3-204ENST00000578208 VWDEQ8N2E2 1590 aa17.63■□□□□ 0.41
GGA3-204ENST00000578208 PLA2R1Q13018 1463 aa17.63■□□□□ 0.41
GGA3-204ENST00000578208 UNC13BO14795 1591 aa17.62■□□□□ 0.41
GGA3-204ENST00000578208 PTPRTO14522 1441 aa17.6■□□□□ 0.41
GGA3-204ENST00000578208 EFCAB6Q5THR3 1501 aa17.6■□□□□ 0.41
GGA3-204ENST00000578208 UGGT1Q9NYU2 1555 aa17.6■□□□□ 0.41
GGA3-204ENST00000578208 PKD2Q13563 968 aa17.59■□□□□ 0.41
GGA3-204ENST00000578208 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
GGA3-204ENST00000578208 NCKAP5LQ9HCH0 1330 aa17.56■□□□□ 0.4
GGA3-204ENST00000578208 TET3O43151 1660 aa17.56■□□□□ 0.4
GGA3-204ENST00000578208 CFAP65Q6ZU64 1925 aaKnown RBP17.55■□□□□ 0.4
GGA3-204ENST00000578208 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
GGA3-204ENST00000578208 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
GGA3-204ENST00000578208 IQGAP3Q86VI3 1631 aa17.54■□□□□ 0.4
GGA3-204ENST00000578208 NUP155O75694 1391 aa17.53■□□□□ 0.4
GGA3-204ENST00000578208 POLR1AO95602 1720 aaPredicted RBP17.53■□□□□ 0.4
GGA3-204ENST00000578208 ANKLE2Q86XL3 938 aa17.52■□□□□ 0.4
GGA3-204ENST00000578208 STAG3Q9UJ98 1225 aa17.52■□□□□ 0.4
GGA3-204ENST00000578208 NAIPQ13075 1403 aa17.51■□□□□ 0.39
GGA3-204ENST00000578208 UBR1Q8IWV7 1749 aa17.5■□□□□ 0.39
GGA3-204ENST00000578208 NOS1P29475 1434 aa17.5■□□□□ 0.39
GGA3-204ENST00000578208 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
GGA3-204ENST00000578208 SYNMO15061 1565 aa17.49■□□□□ 0.39
GGA3-204ENST00000578208 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
GGA3-204ENST00000578208 SLC52A1Q9NWF4 448 aa17.47■□□□□ 0.39
GGA3-204ENST00000578208 E9PCH4 1651 aa17.46■□□□□ 0.39
GGA3-204ENST00000578208 KDM5AP29375 1690 aaKnown RBP17.46■□□□□ 0.39
GGA3-204ENST00000578208 NEURL4Q96JN8 1562 aa17.46■□□□□ 0.39
GGA3-204ENST00000578208 CERKQ8TCT0 537 aa17.46■□□□□ 0.39
GGA3-204ENST00000578208 ADGRB3O60242 1522 aa17.46■□□□□ 0.39
GGA3-204ENST00000578208 IDI1Q13907 227 aa17.45■□□□□ 0.38
GGA3-204ENST00000578208 NPHP4O75161 1426 aaPredicted RBP17.45■□□□□ 0.38
GGA3-204ENST00000578208 SLIT1O75093 1534 aa17.44■□□□□ 0.38
GGA3-204ENST00000578208 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
GGA3-204ENST00000578208 MED14O60244 1454 aa17.44■□□□□ 0.38
GGA3-204ENST00000578208 SCAF11Q99590 1463 aaKnown RBP17.44■□□□□ 0.38
GGA3-204ENST00000578208 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
GGA3-204ENST00000578208 FBXO41Q8TF61 875 aa17.43■□□□□ 0.38
GGA3-204ENST00000578208 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
GGA3-204ENST00000578208 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
GGA3-204ENST00000578208 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
GGA3-204ENST00000578208 TMEM2Q9UHN6 1383 aa17.41■□□□□ 0.38
GGA3-204ENST00000578208 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
GGA3-204ENST00000578208 LTBP4Q8N2S1 1624 aa17.4■□□□□ 0.38
GGA3-204ENST00000578208 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
GGA3-204ENST00000578208 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
GGA3-204ENST00000578208 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
GGA3-204ENST00000578208 LTKP29376 864 aa17.36■□□□□ 0.37
GGA3-204ENST00000578208 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
GGA3-204ENST00000578208 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
GGA3-204ENST00000578208 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
GGA3-204ENST00000578208 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
GGA3-204ENST00000578208 CPS1P31327 1500 aa17.35■□□□□ 0.37
GGA3-204ENST00000578208 TMEM131LA2VDJ0 1609 aa17.35■□□□□ 0.37
GGA3-204ENST00000578208 PPP1R15AO75807 674 aaPredicted RBP17.33■□□□□ 0.36
GGA3-204ENST00000578208 TRPM2O94759 1503 aa17.32■□□□□ 0.36
GGA3-204ENST00000578208 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
GGA3-204ENST00000578208 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms